RNA–Protein interactions for RNA: ENST00000494566.5

CCDC88B-210, Transcript of coiled-coil domain containing 88B, humanhuman

TSL 2

Gene CCDC88B, Length 2,909 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88B-210ENST00000494566 COLEC10Q9Y6Z7 277 aa15.4■□□□□ 0.06
CCDC88B-210ENST00000494566 REM1O75628 298 aa15.4■□□□□ 0.06
CCDC88B-210ENST00000494566 RGS8P57771 180 aaPredicted RBP15.4■□□□□ 0.06
CCDC88B-210ENST00000494566 ABATP80404 500 aa15.4■□□□□ 0.06
CCDC88B-210ENST00000494566 CAMK2BQ13554 666 aa15.4■□□□□ 0.06
CCDC88B-210ENST00000494566 RUNX2Q13950 521 aa15.4■□□□□ 0.06
CCDC88B-210ENST00000494566 GPR68Q15743 365 aa15.4■□□□□ 0.06
CCDC88B-210ENST00000494566 ENTPD8Q5MY95 495 aa15.4■□□□□ 0.06
CCDC88B-210ENST00000494566 BHLHB9Q6PI77 547 aa15.4■□□□□ 0.06
CCDC88B-210ENST00000494566 XKRXQ6PP77 449 aa15.4■□□□□ 0.06
CCDC88B-210ENST00000494566 NRROSQ86YC3 692 aa15.4■□□□□ 0.06
CCDC88B-210ENST00000494566 OR5T3Q8NGG3 340 aa15.4■□□□□ 0.06
CCDC88B-210ENST00000494566 SPATA5L1Q9BVQ7 753 aa15.4■□□□□ 0.06
CCDC88B-210ENST00000494566 PINK1Q9BXM7 581 aa15.4■□□□□ 0.06
CCDC88B-210ENST00000494566 POLDIP3Q9BY77 421 aaKnown RBP15.4■□□□□ 0.06
CCDC88B-210ENST00000494566 FBXO34Q9NWN3 711 aa15.4■□□□□ 0.06
CCDC88B-210ENST00000494566 ZSCAN32Q9NX65 697 aa15.4■□□□□ 0.06
CCDC88B-210ENST00000494566 WSB2Q9NYS7 404 aaPredicted RBP15.4■□□□□ 0.06
CCDC88B-210ENST00000494566 TRAPPC4Q9Y296 219 aa15.4■□□□□ 0.06
CCDC88B-210ENST00000494566 TBXA2RP21731 343 aa15.39■□□□□ 0.05
CCDC88B-210ENST00000494566 UQCRC1P31930 480 aa15.39■□□□□ 0.05
CCDC88B-210ENST00000494566 CDK5Q00535 292 aa15.39■□□□□ 0.05
CCDC88B-210ENST00000494566 SDE2Q6IQ49 451 aa15.39■□□□□ 0.05
CCDC88B-210ENST00000494566 RPTNQ6XPR3 784 aa15.39■□□□□ 0.05
CCDC88B-210ENST00000494566 ESPNLQ6ZVH7 1005 aa15.39■□□□□ 0.05
CCDC88B-210ENST00000494566 ASPGQ86U10 573 aa15.39■□□□□ 0.05
CCDC88B-210ENST00000494566 NRMQ8IXM6 262 aa15.39■□□□□ 0.05
CCDC88B-210ENST00000494566 BMPERQ8N8U9 685 aa15.39■□□□□ 0.05
CCDC88B-210ENST00000494566 OR5H6Q8NGV6 325 aa15.39■□□□□ 0.05
CCDC88B-210ENST00000494566 BMFQ96LC9 184 aa15.39■□□□□ 0.05
CCDC88B-210ENST00000494566 C10orf90Q96M02 699 aa15.39■□□□□ 0.05
CCDC88B-210ENST00000494566 ADAP2Q9NPF8 381 aa15.39■□□□□ 0.05
CCDC88B-210ENST00000494566 MAT2BQ9NZL9 334 aa15.39■□□□□ 0.05
CCDC88B-210ENST00000494566 MRPL15Q9P015 296 aaKnown RBP15.39■□□□□ 0.05
CCDC88B-210ENST00000494566 MN1Q10571 1320 aaPredicted RBP15.39■□□□□ 0.05
CCDC88B-210ENST00000494566 OR6C74A6NCV1 312 aa15.39■□□□□ 0.05
CCDC88B-210ENST00000494566 SCO2O43819 266 aa15.39■□□□□ 0.05
CCDC88B-210ENST00000494566 GKN3PP0CG01 181 aa15.39■□□□□ 0.05
CCDC88B-210ENST00000494566 BCL2L15Q5TBC7 163 aa15.39■□□□□ 0.05
CCDC88B-210ENST00000494566 PLEKHM3Q6ZWE6 761 aa15.39■□□□□ 0.05
CCDC88B-210ENST00000494566 SFXN5Q8TD22 340 aa15.39■□□□□ 0.05
CCDC88B-210ENST00000494566 CCDC86Q9H6F5 360 aaKnown RBP15.39■□□□□ 0.05
CCDC88B-210ENST00000494566 KIR3DX1Q9H7L2 352 aa15.39■□□□□ 0.05
CCDC88B-210ENST00000494566 PTGFRNQ9P2B2 879 aa15.39■□□□□ 0.05
CCDC88B-210ENST00000494566 LYRM1O43325 122 aa15.38■□□□□ 0.05
CCDC88B-210ENST00000494566 GYPBP06028 91 aa15.38■□□□□ 0.05
CCDC88B-210ENST00000494566 PRG2P13727 222 aa15.38■□□□□ 0.05
CCDC88B-210ENST00000494566 CPEP16870 476 aa15.38■□□□□ 0.05
CCDC88B-210ENST00000494566 AGFG1P52594 562 aaKnown RBP15.38■□□□□ 0.05
CCDC88B-210ENST00000494566 SMSP52788 366 aa15.38■□□□□ 0.05
CCDC88B-210ENST00000494566 RPS7P62081 194 aaKnown RBP15.38■□□□□ 0.05
CCDC88B-210ENST00000494566 PPP1CAP62136 330 aa15.38■□□□□ 0.05
CCDC88B-210ENST00000494566 DUSP5Q16690 384 aa15.38■□□□□ 0.05
CCDC88B-210ENST00000494566 FAM92BQ6ZTR7 304 aa15.38■□□□□ 0.05
CCDC88B-210ENST00000494566 FAM26EQ8N5C1 309 aa15.38■□□□□ 0.05
CCDC88B-210ENST00000494566 SLC37A3Q8NCC5 494 aa15.38■□□□□ 0.05
CCDC88B-210ENST00000494566 DIO2Q92813 273 aa15.38■□□□□ 0.05
CCDC88B-210ENST00000494566 ELSPBP1Q96BH3 223 aa15.38■□□□□ 0.05
CCDC88B-210ENST00000494566 CLIP3Q96DZ5 547 aa15.38■□□□□ 0.05
CCDC88B-210ENST00000494566 PPIL3Q9H2H8 161 aaKnown RBP15.38■□□□□ 0.05
CCDC88B-210ENST00000494566 TCEAL2Q9H3H9 227 aaPredicted RBP15.38■□□□□ 0.05
CCDC88B-210ENST00000494566 EXTL2Q9UBQ6 330 aa15.38■□□□□ 0.05
CCDC88B-210ENST00000494566 ZNF222Q9UK12 451 aa15.38■□□□□ 0.05
CCDC88B-210ENST00000494566 DIMT1Q9UNQ2 313 aaKnown RBP15.38■□□□□ 0.05
CCDC88B-210ENST00000494566 WDFY3Q8IZQ1 3526 aa15.38■□□□□ 0.05
CCDC88B-210ENST00000494566 LRRC72A6NJI9 287 aa15.38■□□□□ 0.05
CCDC88B-210ENST00000494566 OCLNQ16625 522 aa15.38■□□□□ 0.05
CCDC88B-210ENST00000494566 MEDAGQ5VYS4 303 aa15.38■□□□□ 0.05
CCDC88B-210ENST00000494566 FAM205BPQ63HN1 556 aa15.38■□□□□ 0.05
CCDC88B-210ENST00000494566 SLC27A4Q6P1M0 643 aa15.38■□□□□ 0.05
CCDC88B-210ENST00000494566 NR2C2APQ86WQ0 139 aa15.38■□□□□ 0.05
CCDC88B-210ENST00000494566 TMEM52Q8NDY8 209 aa15.38■□□□□ 0.05
CCDC88B-210ENST00000494566 OR7G1Q8NGA0 311 aa15.38■□□□□ 0.05
CCDC88B-210ENST00000494566 OR13C5Q8NGS8 318 aa15.38■□□□□ 0.05
CCDC88B-210ENST00000494566 OR4Q3Q8NH05 313 aa15.38■□□□□ 0.05
CCDC88B-210ENST00000494566 MCHR1Q99705 422 aa15.38■□□□□ 0.05
CCDC88B-210ENST00000494566 C1QTNF7Q9BXJ2 289 aa15.38■□□□□ 0.05
CCDC88B-210ENST00000494566 IQCMA0A1B0GVH7 501 aa15.37■□□□□ 0.05
CCDC88B-210ENST00000494566 ZSCAN5BA6NJL1 495 aa15.37■□□□□ 0.05
CCDC88B-210ENST00000494566 H3BSH0 61 aa15.37■□□□□ 0.05
CCDC88B-210ENST00000494566 GABRPO00591 440 aa15.37■□□□□ 0.05
CCDC88B-210ENST00000494566 SLC3A1Q07837 685 aa15.37■□□□□ 0.05
CCDC88B-210ENST00000494566 FAPQ12884 760 aa15.37■□□□□ 0.05
CCDC88B-210ENST00000494566 ASAH1Q13510 395 aa15.37■□□□□ 0.05
CCDC88B-210ENST00000494566 GPR18Q14330 331 aa15.37■□□□□ 0.05
CCDC88B-210ENST00000494566 PLK5Q496M5 336 aa15.37■□□□□ 0.05
CCDC88B-210ENST00000494566 ZC3H14Q6PJT7 736 aaKnown RBP15.37■□□□□ 0.05
CCDC88B-210ENST00000494566 ARL9Q6T311 187 aa15.37■□□□□ 0.05
CCDC88B-210ENST00000494566 FRRS1Q6ZNA5 592 aa15.37■□□□□ 0.05
CCDC88B-210ENST00000494566 IZUMO1Q8IYV9 350 aa15.37■□□□□ 0.05
CCDC88B-210ENST00000494566 ORAI1Q96D31 301 aa15.37■□□□□ 0.05
CCDC88B-210ENST00000494566 ACTRT3Q9BYD9 372 aa15.37■□□□□ 0.05
CCDC88B-210ENST00000494566 ENKD1Q9H0I2 346 aa15.37■□□□□ 0.05
CCDC88B-210ENST00000494566 OR6C2Q9NZP2 312 aa15.37■□□□□ 0.05
CCDC88B-210ENST00000494566 TESQ9UGI8 421 aaKnown RBP15.37■□□□□ 0.05
CCDC88B-210ENST00000494566 GSTK1Q9Y2Q3 226 aa15.37■□□□□ 0.05
CCDC88B-210ENST00000494566 SIRT4Q9Y6E7 314 aaPredicted RBP15.37■□□□□ 0.05
CCDC88B-210ENST00000494566 UBXN7O94888 489 aa15.37■□□□□ 0.05
CCDC88B-210ENST00000494566 TOXO94900 526 aa15.37■□□□□ 0.05
CCDC88B-210ENST00000494566 CTSBP07858 339 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms