RNA–Protein interactions for RNA: ENST00000492977.5

PTPN7-216, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 1,595 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-216ENST00000492977 PRR7Q8TB68 274 aa12.98□□□□□ -0.33
PTPN7-216ENST00000492977 OIT3Q8WWZ8 545 aa12.98□□□□□ -0.33
PTPN7-216ENST00000492977 FCGR1BQ92637 280 aa12.98□□□□□ -0.33
PTPN7-216ENST00000492977 MPP4Q96JB8 637 aa12.98□□□□□ -0.33
PTPN7-216ENST00000492977 RHNO1Q9BSD3 238 aa12.98□□□□□ -0.33
PTPN7-216ENST00000492977 ITPAQ9BY32 194 aa12.98□□□□□ -0.33
PTPN7-216ENST00000492977 TMEM27Q9HBJ8 222 aa12.98□□□□□ -0.33
PTPN7-216ENST00000492977 SLC25A19Q9HC21 320 aa12.98□□□□□ -0.33
PTPN7-216ENST00000492977 ACOT13Q9NPJ3 140 aa12.98□□□□□ -0.33
PTPN7-216ENST00000492977 CNOT2Q9NZN8 540 aaKnown RBP12.98□□□□□ -0.33
PTPN7-216ENST00000492977 SLC6A14Q9UN76 642 aa12.98□□□□□ -0.33
PTPN7-216ENST00000492977 CLCA3PQ9Y6N3 262 aa12.98□□□□□ -0.33
PTPN7-216ENST00000492977 SEC16AO15027 2179 aa12.98□□□□□ -0.33
PTPN7-216ENST00000492977 IGHV5-10-1A0A0J9YXX1 117 aa12.98□□□□□ -0.33
PTPN7-216ENST00000492977 TMEM221A6NGB7 291 aa12.98□□□□□ -0.33
PTPN7-216ENST00000492977 TRIM64BA6NI03 449 aa12.98□□□□□ -0.33
PTPN7-216ENST00000492977 H3BMQ9 156 aa12.98□□□□□ -0.33
PTPN7-216ENST00000492977 M0R296 226 aa12.98□□□□□ -0.33
PTPN7-216ENST00000492977 KLF4O43474 513 aa12.98□□□□□ -0.33
PTPN7-216ENST00000492977 PRG2P13727 222 aa12.98□□□□□ -0.33
PTPN7-216ENST00000492977 RORAP35398 523 aa12.98□□□□□ -0.33
PTPN7-216ENST00000492977 PEX19P40855 299 aa12.98□□□□□ -0.33
PTPN7-216ENST00000492977 PPICP45877 212 aa12.98□□□□□ -0.33
PTPN7-216ENST00000492977 MAP2K4P45985 399 aa12.98□□□□□ -0.33
PTPN7-216ENST00000492977 GP2P55259 537 aaKnown RBP12.98□□□□□ -0.33
PTPN7-216ENST00000492977 FGFBP1Q14512 234 aa12.98□□□□□ -0.33
PTPN7-216ENST00000492977 GINS1Q14691 196 aa12.98□□□□□ -0.33
PTPN7-216ENST00000492977 OCLNQ16625 522 aa12.98□□□□□ -0.33
PTPN7-216ENST00000492977 SLC25A30Q5SVS4 291 aa12.98□□□□□ -0.33
PTPN7-216ENST00000492977 SLC23A3Q6PIS1 610 aa12.98□□□□□ -0.33
PTPN7-216ENST00000492977 FAM26EQ8N5C1 309 aa12.98□□□□□ -0.33
PTPN7-216ENST00000492977 TEX47Q8TBZ9 253 aa12.98□□□□□ -0.33
PTPN7-216ENST00000492977 RAB2BQ8WUD1 216 aa12.98□□□□□ -0.33
PTPN7-216ENST00000492977 ZFAND2BQ8WV99 257 aa12.98□□□□□ -0.33
PTPN7-216ENST00000492977 TSLPQ969D9 159 aa12.98□□□□□ -0.33
PTPN7-216ENST00000492977 FAM46AQ96IP4 442 aaKnown RBP12.98□□□□□ -0.33
PTPN7-216ENST00000492977 ART5Q96L15 291 aa12.98□□□□□ -0.33
PTPN7-216ENST00000492977 COG8Q96MW5 612 aa12.98□□□□□ -0.33
PTPN7-216ENST00000492977 PRSS27Q9BQR3 290 aa12.98□□□□□ -0.33
PTPN7-216ENST00000492977 POLDIP3Q9BY77 421 aaKnown RBP12.98□□□□□ -0.33
PTPN7-216ENST00000492977 TGIF2Q9GZN2 237 aa12.98□□□□□ -0.33
PTPN7-216ENST00000492977 M0R129 80 aa12.97□□□□□ -0.33
PTPN7-216ENST00000492977 POLR1CO15160 346 aaPredicted RBP12.97□□□□□ -0.33
PTPN7-216ENST00000492977 FADS2O95864 444 aaKnown RBP12.97□□□□□ -0.33
PTPN7-216ENST00000492977 IGKV3-11P04433 115 aa12.97□□□□□ -0.33
PTPN7-216ENST00000492977 SYPP08247 313 aa12.97□□□□□ -0.33
PTPN7-216ENST00000492977 CKMT1AP12532 417 aa12.97□□□□□ -0.33
PTPN7-216ENST00000492977 PCSK6P29122 969 aa12.97□□□□□ -0.33
PTPN7-216ENST00000492977 MASP1P48740 699 aa12.97□□□□□ -0.33
PTPN7-216ENST00000492977 DUSP3P51452 185 aaPredicted RBP12.97□□□□□ -0.33
PTPN7-216ENST00000492977 NUDT6P53370 316 aa12.97□□□□□ -0.33
PTPN7-216ENST00000492977 PLAURQ03405 335 aa12.97□□□□□ -0.33
PTPN7-216ENST00000492977 NSDHLQ15738 373 aa12.97□□□□□ -0.33
PTPN7-216ENST00000492977 VWA2Q5GFL6 755 aa12.97□□□□□ -0.33
PTPN7-216ENST00000492977 C1orf189Q5VU69 101 aa12.97□□□□□ -0.33
PTPN7-216ENST00000492977 UBE2UQ5VVX9 321 aa12.97□□□□□ -0.33
PTPN7-216ENST00000492977 MEDAGQ5VYS4 303 aa12.97□□□□□ -0.33
PTPN7-216ENST00000492977 ZNF550Q7Z398 422 aa12.97□□□□□ -0.33
PTPN7-216ENST00000492977 MRGPREQ86SM8 312 aa12.97□□□□□ -0.33
PTPN7-216ENST00000492977 KIF18BQ86Y91 864 aa12.97□□□□□ -0.33
PTPN7-216ENST00000492977 NRMQ8IXM6 262 aa12.97□□□□□ -0.33
PTPN7-216ENST00000492977 STX19Q8N4C7 294 aa12.97□□□□□ -0.33
PTPN7-216ENST00000492977 ZNF614Q8N883 585 aa12.97□□□□□ -0.33
PTPN7-216ENST00000492977 TMEM105Q8N8V8 129 aa12.97□□□□□ -0.33
PTPN7-216ENST00000492977 PLPP5Q8NEB5 264 aa12.97□□□□□ -0.33
PTPN7-216ENST00000492977 B3GNT7Q8NFL0 401 aa12.97□□□□□ -0.33
PTPN7-216ENST00000492977 OR14A16Q8NHC5 309 aa12.97□□□□□ -0.33
PTPN7-216ENST00000492977 TMEM255BQ8WV15 326 aa12.97□□□□□ -0.33
PTPN7-216ENST00000492977 CNOT9Q92600 299 aaKnown RBP12.97□□□□□ -0.33
PTPN7-216ENST00000492977 OSTF1Q92882 214 aa12.97□□□□□ -0.33
PTPN7-216ENST00000492977 DAZLQ92904 295 aaKnown RBP12.97□□□□□ -0.33
PTPN7-216ENST00000492977 HS6ST2Q96MM7 605 aa12.97□□□□□ -0.33
PTPN7-216ENST00000492977 NECAB3Q96P71 396 aaPredicted RBP12.97□□□□□ -0.33
PTPN7-216ENST00000492977 IL4I1Q96RQ9 567 aa12.97□□□□□ -0.33
PTPN7-216ENST00000492977 TRIM2Q9C040 744 aa12.97□□□□□ -0.33
PTPN7-216ENST00000492977 SLC7A5P2Q9GIP4 190 aa12.97□□□□□ -0.33
PTPN7-216ENST00000492977 HOXD1Q9GZZ0 328 aa12.97□□□□□ -0.33
PTPN7-216ENST00000492977 AMBNQ9NP70 447 aa12.97□□□□□ -0.33
PTPN7-216ENST00000492977 DNAJB12Q9NXW2 375 aaKnown RBP12.97□□□□□ -0.33
PTPN7-216ENST00000492977 CNIH4Q9P003 139 aa12.97□□□□□ -0.33
PTPN7-216ENST00000492977 WARS2Q9UGM6 360 aaKnown RBP12.97□□□□□ -0.33
PTPN7-216ENST00000492977 ADAMTS9Q9P2N4 1935 aa12.96□□□□□ -0.33
PTPN7-216ENST00000492977 ENO4A6NNW6 628 aa12.96□□□□□ -0.33
PTPN7-216ENST00000492977 BCAS1O75363 584 aaPredicted RBP12.96□□□□□ -0.33
PTPN7-216ENST00000492977 LYPD3O95274 346 aa12.96□□□□□ -0.33
PTPN7-216ENST00000492977 DDAH2O95865 285 aa12.96□□□□□ -0.33
PTPN7-216ENST00000492977 PIPP12273 146 aaPredicted RBP12.96□□□□□ -0.33
PTPN7-216ENST00000492977 ACAA2P42765 397 aaKnown RBP12.96□□□□□ -0.33
PTPN7-216ENST00000492977 SLC15A1P46059 708 aa12.96□□□□□ -0.33
PTPN7-216ENST00000492977 PCYT1AP49585 367 aa12.96□□□□□ -0.33
PTPN7-216ENST00000492977 ST13P50502 369 aaKnown RBP12.96□□□□□ -0.33
PTPN7-216ENST00000492977 DCAF7P61962 342 aa12.96□□□□□ -0.33
PTPN7-216ENST00000492977 EFNB1P98172 346 aa12.96□□□□□ -0.33
PTPN7-216ENST00000492977 ST3GAL4Q11206 333 aa12.96□□□□□ -0.33
PTPN7-216ENST00000492977 TBCEQ15813 527 aaPredicted RBP12.96□□□□□ -0.33
PTPN7-216ENST00000492977 TRIM61Q5EBN2 209 aa12.96□□□□□ -0.33
PTPN7-216ENST00000492977 SLC27A4Q6P1M0 643 aa12.96□□□□□ -0.33
PTPN7-216ENST00000492977 CCDC81Q6ZN84 652 aa12.96□□□□□ -0.33
PTPN7-216ENST00000492977 LAPTM4BQ86VI4 370 aa12.96□□□□□ -0.33
PTPN7-216ENST00000492977 ANKRD13BQ86YJ7 626 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms