RNA–Protein interactions for RNA: ENST00000486085.5

RTN4-214, Transcript of reticulon 4, humanhuman

TSL 3

Gene RTN4, Length 955 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-214ENST00000486085 RIDAP52758 137 aaKnown RBP4.84□□□□□ -1.63
RTN4-214ENST00000486085 DEFB103AP81534 67 aa4.84□□□□□ -1.63
RTN4-214ENST00000486085 GALK2Q01415 458 aa4.84□□□□□ -1.63
RTN4-214ENST00000486085 GFPT1Q06210 699 aaPredicted RBP4.84□□□□□ -1.63
RTN4-214ENST00000486085 RIGQ13278 110 aa4.84□□□□□ -1.63
RTN4-214ENST00000486085 CUL2Q13617 745 aa4.84□□□□□ -1.63
RTN4-214ENST00000486085 MEF2DQ14814 521 aa4.84□□□□□ -1.63
RTN4-214ENST00000486085 SIX1Q15475 284 aaPredicted RBP4.84□□□□□ -1.63
RTN4-214ENST00000486085 OR1C1Q15619 314 aa4.84□□□□□ -1.63
RTN4-214ENST00000486085 HFEQ30201 348 aa4.84□□□□□ -1.63
RTN4-214ENST00000486085 TEX35Q5T0J7 233 aa4.84□□□□□ -1.63
RTN4-214ENST00000486085 SLC8B1Q6J4K2 584 aa4.84□□□□□ -1.63
RTN4-214ENST00000486085 DEFB128Q7Z7B8 93 aa4.84□□□□□ -1.63
RTN4-214ENST00000486085 MYPOPQ86VE0 399 aaPredicted RBP4.84□□□□□ -1.63
RTN4-214ENST00000486085 C17orf64Q86WR6 236 aa4.84□□□□□ -1.63
RTN4-214ENST00000486085 SLC39A11Q8N1S5 342 aa4.84□□□□□ -1.63
RTN4-214ENST00000486085 C2orf15Q8WU43 125 aaKnown RBP4.84□□□□□ -1.63
RTN4-214ENST00000486085 RASL10AQ92737 203 aa4.84□□□□□ -1.63
RTN4-214ENST00000486085 ITFG2Q969R8 447 aa4.84□□□□□ -1.63
RTN4-214ENST00000486085 MRPL24Q96A35 216 aaKnown RBP4.84□□□□□ -1.63
RTN4-214ENST00000486085 CCDC127Q96BQ5 260 aa4.84□□□□□ -1.63
RTN4-214ENST00000486085 HPDLQ96IR7 371 aa4.84□□□□□ -1.63
RTN4-214ENST00000486085 RCHY1Q96PM5 261 aa4.84□□□□□ -1.63
RTN4-214ENST00000486085 PANX2Q96RD6 677 aa4.84□□□□□ -1.63
RTN4-214ENST00000486085 PKMYT1Q99640 499 aa4.84□□□□□ -1.63
RTN4-214ENST00000486085 PAIP2Q9BPZ3 127 aaKnown RBP4.84□□□□□ -1.63
RTN4-214ENST00000486085 ACBD6Q9BR61 282 aa4.84□□□□□ -1.63
RTN4-214ENST00000486085 ACAT2Q9BWD1 397 aa4.84□□□□□ -1.63
RTN4-214ENST00000486085 OCR1Q9BZK8 76 aa4.84□□□□□ -1.63
RTN4-214ENST00000486085 CXXC4Q9H2H0 198 aa4.84□□□□□ -1.63
RTN4-214ENST00000486085 DCLRE1BQ9H816 532 aa4.84□□□□□ -1.63
RTN4-214ENST00000486085 JPT2Q9H910 190 aa4.84□□□□□ -1.63
RTN4-214ENST00000486085 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP4.84□□□□□ -1.632e-8■■□□□ 12.4
RTN4-214ENST00000486085 MARCH5Q9NX47 278 aa4.84□□□□□ -1.63
RTN4-214ENST00000486085 THYN1Q9P016 225 aa4.84□□□□□ -1.63
RTN4-214ENST00000486085 IFNKQ9P0W0 207 aa4.84□□□□□ -1.63
RTN4-214ENST00000486085 TUBGCP4Q9UGJ1 667 aa4.84□□□□□ -1.63
RTN4-214ENST00000486085 MRTO4Q9UKD2 239 aaKnown RBP4.84□□□□□ -1.63
RTN4-214ENST00000486085 ADAM28Q9UKQ2 775 aa4.84□□□□□ -1.63
RTN4-214ENST00000486085 BARX2Q9UMQ3 279 aaPredicted RBP4.84□□□□□ -1.63
RTN4-214ENST00000486085 TRIM64A6NGJ6 449 aa4.83□□□□□ -1.64
RTN4-214ENST00000486085 TRIM64BA6NI03 449 aa4.83□□□□□ -1.64
RTN4-214ENST00000486085 SLC28A1O00337 649 aa4.83□□□□□ -1.64
RTN4-214ENST00000486085 ATP6V1G1O75348 118 aa4.83□□□□□ -1.64
RTN4-214ENST00000486085 ANXA9O76027 345 aa4.83□□□□□ -1.64
RTN4-214ENST00000486085 OR6B1O95007 311 aa4.83□□□□□ -1.64
RTN4-214ENST00000486085 ADCY5O95622 1261 aa4.83□□□□□ -1.64
RTN4-214ENST00000486085 LSM8O95777 96 aaKnown RBP4.83□□□□□ -1.64
RTN4-214ENST00000486085 IGHV3-13P01766 116 aa4.83□□□□□ -1.64
RTN4-214ENST00000486085 FHP07954 510 aa4.83□□□□□ -1.64
RTN4-214ENST00000486085 MYL6P60660 151 aa4.83□□□□□ -1.64
RTN4-214ENST00000486085 RPL27P61353 136 aaKnown RBP4.83□□□□□ -1.64
RTN4-214ENST00000486085 OSTNP61366 133 aa4.83□□□□□ -1.64
RTN4-214ENST00000486085 ARF5P84085 180 aa4.83□□□□□ -1.64
RTN4-214ENST00000486085 TFAMQ00059 246 aaKnown RBP4.83□□□□□ -1.64
RTN4-214ENST00000486085 CCDC173Q0VFZ6 552 aa4.83□□□□□ -1.64
RTN4-214ENST00000486085 IFT88Q13099 833 aa4.83□□□□□ -1.64
RTN4-214ENST00000486085 SLC17A1Q14916 467 aa4.83□□□□□ -1.64
RTN4-214ENST00000486085 TRADDQ15628 312 aa4.83□□□□□ -1.64
RTN4-214ENST00000486085 ZNF699Q32M78 642 aa4.83□□□□□ -1.64
RTN4-214ENST00000486085 CFAP221Q4G0U5 840 aa4.83□□□□□ -1.64
RTN4-214ENST00000486085 MUC21Q5SSG8 566 aa4.83□□□□□ -1.64
RTN4-214ENST00000486085 DCAF12Q5T6F0 453 aa4.83□□□□□ -1.64
RTN4-214ENST00000486085 B3GLCTQ6Y288 498 aa4.83□□□□□ -1.64
RTN4-214ENST00000486085 COLGALT1Q8NBJ5 622 aa4.83□□□□□ -1.64
RTN4-214ENST00000486085 CCDC112Q8NEF3 446 aa4.83□□□□□ -1.64
RTN4-214ENST00000486085 ZNF397Q8NF99 534 aaPredicted RBP4.83□□□□□ -1.64
RTN4-214ENST00000486085 NEK11Q8NG66 645 aa4.83□□□□□ -1.64
RTN4-214ENST00000486085 OR8K1Q8NGG5 319 aa4.83□□□□□ -1.64
RTN4-214ENST00000486085 GLYATL1Q969I3 302 aa4.83□□□□□ -1.64
RTN4-214ENST00000486085 ESAMQ96AP7 390 aa4.83□□□□□ -1.64
RTN4-214ENST00000486085 C18orf25Q96B23 403 aaPredicted RBP4.83□□□□□ -1.64
RTN4-214ENST00000486085 MRPL53Q96EL3 112 aaKnown RBP4.83□□□□□ -1.64
RTN4-214ENST00000486085 EEF2KMTQ96G04 330 aa4.83□□□□□ -1.64
RTN4-214ENST00000486085 RAB40CQ96S21 281 aa4.83□□□□□ -1.64
RTN4-214ENST00000486085 CCDC28BQ9BUN5 200 aa4.83□□□□□ -1.64
RTN4-214ENST00000486085 CXCL16Q9H2A7 254 aa4.83□□□□□ -1.64
RTN4-214ENST00000486085 GDF3Q9NR23 364 aa4.83□□□□□ -1.64
RTN4-214ENST00000486085 ZNF346Q9UL40 294 aaKnown RBP4.83□□□□□ -1.64
RTN4-214ENST00000486085 VWA8A3KMH1 1905 aa4.83□□□□□ -1.64
RTN4-214ENST00000486085 KIAA1671Q9BY89 1806 aa4.83□□□□□ -1.64
RTN4-214ENST00000486085 PTPRDP23468 1912 aa4.82□□□□□ -1.64
RTN4-214ENST00000486085 NLRC5Q86WI3 1866 aa4.82□□□□□ -1.64
RTN4-214ENST00000486085 A0A1W2PPR1 153 aa4.82□□□□□ -1.64
RTN4-214ENST00000486085 ZNF724A8MTY0 619 aa4.82□□□□□ -1.64
RTN4-214ENST00000486085 VEGFDO43915 354 aa4.82□□□□□ -1.64
RTN4-214ENST00000486085 HUS1O60921 280 aa4.82□□□□□ -1.64
RTN4-214ENST00000486085 B3GAT3O94766 335 aa4.82□□□□□ -1.64
RTN4-214ENST00000486085 TXNDC12O95881 172 aa4.82□□□□□ -1.64
RTN4-214ENST00000486085 TPM1P09493 284 aa4.82□□□□□ -1.64
RTN4-214ENST00000486085 CT45A8P0DMV1 189 aa4.82□□□□□ -1.64
RTN4-214ENST00000486085 CT45A9P0DMV2 189 aa4.82□□□□□ -1.64
RTN4-214ENST00000486085 GZMAP12544 262 aa4.82□□□□□ -1.64
RTN4-214ENST00000486085 KRT5P13647 590 aa4.82□□□□□ -1.64
RTN4-214ENST00000486085 HLA-DPA1P20036 260 aa4.82□□□□□ -1.64
RTN4-214ENST00000486085 SLC11A1P49279 550 aa4.82□□□□□ -1.64
RTN4-214ENST00000486085 HERV-K104P63124 156 aa4.82□□□□□ -1.64
RTN4-214ENST00000486085 TNNC1P63316 161 aa4.82□□□□□ -1.64
RTN4-214ENST00000486085 AP1B1Q10567 949 aa4.82□□□□□ -1.64
RTN4-214ENST00000486085 BTG3Q14201 252 aaPredicted RBP4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms