RNA–Protein interactions for RNA: ENST00000484855.2

CTSA-207, Transcript of cathepsin A, humanhuman

TSL 1 (best)

Gene CTSA, Length 2,183 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-207ENST00000484855 PLPP5Q8NEB5 264 aa15.43■□□□□ 0.06
CTSA-207ENST00000484855 EFHD2Q96C19 240 aaPredicted RBP15.43■□□□□ 0.06
CTSA-207ENST00000484855 LMF1Q96S06 567 aa15.43■□□□□ 0.06
CTSA-207ENST00000484855 RALGAPA1Q6GYQ0 2036 aa15.42■□□□□ 0.06
CTSA-207ENST00000484855 IGLV3-12A0A075B6K2 115 aa15.42■□□□□ 0.06
CTSA-207ENST00000484855 SYNDIG1LA6NDD5 238 aa15.42■□□□□ 0.06
CTSA-207ENST00000484855 NTN3O00634 580 aaPredicted RBP15.42■□□□□ 0.06
CTSA-207ENST00000484855 PRKNO60260 465 aaPredicted RBP15.42■□□□□ 0.06
CTSA-207ENST00000484855 PIP5K1CO60331 668 aa15.42■□□□□ 0.06
CTSA-207ENST00000484855 ZGLP1P0C6A0 271 aa15.42■□□□□ 0.06
CTSA-207ENST00000484855 PCMT1P22061 227 aa15.42■□□□□ 0.06
CTSA-207ENST00000484855 CSTF2P33240 577 aaKnown RBP eCLIP15.42■□□□□ 0.06
CTSA-207ENST00000484855 NUDT6P53370 316 aa15.42■□□□□ 0.06
CTSA-207ENST00000484855 ZSWIM7Q19AV6 140 aa15.42■□□□□ 0.06
CTSA-207ENST00000484855 LANCL3Q6ZV70 420 aa15.42■□□□□ 0.06
CTSA-207ENST00000484855 RNF217Q8TC41 542 aa15.42■□□□□ 0.06
CTSA-207ENST00000484855 LCORQ96JN0 433 aaPredicted RBP15.42■□□□□ 0.06
CTSA-207ENST00000484855 GAL3ST4Q96RP7 486 aa15.42■□□□□ 0.06
CTSA-207ENST00000484855 NUDT9Q9BW91 350 aa15.42■□□□□ 0.06
CTSA-207ENST00000484855 NXF5Q9H1B4 397 aaKnown RBP15.42■□□□□ 0.06
CTSA-207ENST00000484855 TMEM27Q9HBJ8 222 aa15.42■□□□□ 0.06
CTSA-207ENST00000484855 APMAPQ9HDC9 416 aa15.42■□□□□ 0.06
CTSA-207ENST00000484855 KRCC1Q9NPI7 259 aaPredicted RBP15.42■□□□□ 0.06
CTSA-207ENST00000484855 PLCXD1Q9NUJ7 323 aa15.42■□□□□ 0.06
CTSA-207ENST00000484855 OCIAD1Q9NX40 245 aa15.42■□□□□ 0.06
CTSA-207ENST00000484855 COPS7AQ9UBW8 275 aa15.42■□□□□ 0.06
CTSA-207ENST00000484855 FRG2CA6NGY1 282 aa15.42■□□□□ 0.06
CTSA-207ENST00000484855 KHNYNO15037 678 aaKnown RBP15.42■□□□□ 0.06
CTSA-207ENST00000484855 MRPS14O60783 128 aaKnown RBP15.42■□□□□ 0.06
CTSA-207ENST00000484855 MT-ND2P03891 347 aa15.42■□□□□ 0.06
CTSA-207ENST00000484855 HBQ1P09105 142 aa15.42■□□□□ 0.06
CTSA-207ENST00000484855 PTNP21246 168 aa15.42■□□□□ 0.06
CTSA-207ENST00000484855 GRK6P43250 576 aa15.42■□□□□ 0.06
CTSA-207ENST00000484855 GPR4P46093 362 aa15.42■□□□□ 0.06
CTSA-207ENST00000484855 DCDP81605 110 aaKnown RBP15.42■□□□□ 0.06
CTSA-207ENST00000484855 FAAH2Q6GMR7 532 aa15.42■□□□□ 0.06
CTSA-207ENST00000484855 KIF18BQ86Y91 864 aa15.42■□□□□ 0.06
CTSA-207ENST00000484855 IQCF1Q8N6M8 205 aa15.42■□□□□ 0.06
CTSA-207ENST00000484855 OR13F1Q8NGS4 319 aa15.42■□□□□ 0.06
CTSA-207ENST00000484855 ARSGQ96EG1 525 aa15.42■□□□□ 0.06
CTSA-207ENST00000484855 PRSS27Q9BQR3 290 aa15.42■□□□□ 0.06
CTSA-207ENST00000484855 PSORS1C1Q9UIG5 152 aa15.42■□□□□ 0.06
CTSA-207ENST00000484855 PCDHGB1Q9Y5G3 927 aa15.42■□□□□ 0.06
CTSA-207ENST00000484855 KMT2EQ8IZD2 1858 aa15.41■□□□□ 0.06
CTSA-207ENST00000484855 WDR87Q6ZQQ6 2873 aa15.41■□□□□ 0.06
CTSA-207ENST00000484855 EFCAB7A8K855 629 aa15.41■□□□□ 0.06
CTSA-207ENST00000484855 ITIH1P19827 911 aa15.41■□□□□ 0.06
CTSA-207ENST00000484855 PAX7P23759 505 aa15.41■□□□□ 0.06
CTSA-207ENST00000484855 FPR3P25089 353 aa15.41■□□□□ 0.06
CTSA-207ENST00000484855 FOXL2P58012 376 aa15.41■□□□□ 0.06
CTSA-207ENST00000484855 ZNF613Q6PF04 617 aa15.41■□□□□ 0.06
CTSA-207ENST00000484855 RASSF6Q6ZTQ3 369 aa15.41■□□□□ 0.06
CTSA-207ENST00000484855 PRSS48Q7RTY5 328 aa15.41■□□□□ 0.06
CTSA-207ENST00000484855 CMIPQ8IY22 773 aa15.41■□□□□ 0.06
CTSA-207ENST00000484855 SVOPQ8N4V2 548 aa15.41■□□□□ 0.06
CTSA-207ENST00000484855 TEX47Q8TBZ9 253 aa15.41■□□□□ 0.06
CTSA-207ENST00000484855 MUL1Q969V5 352 aa15.41■□□□□ 0.06
CTSA-207ENST00000484855 COPS4Q9BT78 406 aa15.41■□□□□ 0.06
CTSA-207ENST00000484855 LHPPQ9H008 270 aa15.41■□□□□ 0.06
CTSA-207ENST00000484855 DSN1Q9H410 356 aa15.41■□□□□ 0.06
CTSA-207ENST00000484855 EGLN3Q9H6Z9 239 aa15.41■□□□□ 0.06
CTSA-207ENST00000484855 AMBNQ9NP70 447 aa15.41■□□□□ 0.06
CTSA-207ENST00000484855 CLN6Q9NWW5 311 aa15.41■□□□□ 0.06
CTSA-207ENST00000484855 COMMD3-BMI1R4GMX3 469 aa15.41■□□□□ 0.06
CTSA-207ENST00000484855 C2orf92A0A1B0GVN3 265 aa15.41■□□□□ 0.06
CTSA-207ENST00000484855 SERINC4A6NH21 518 aa15.41■□□□□ 0.06
CTSA-207ENST00000484855 LYPD3O95274 346 aa15.41■□□□□ 0.06
CTSA-207ENST00000484855 LDOC1O95751 146 aaPredicted RBP15.41■□□□□ 0.06
CTSA-207ENST00000484855 IL33O95760 270 aa15.41■□□□□ 0.06
CTSA-207ENST00000484855 ZNF883P0CG24 379 aa15.41■□□□□ 0.06
CTSA-207ENST00000484855 DCAF7P61962 342 aa15.41■□□□□ 0.06
CTSA-207ENST00000484855 EMX1Q04741 257 aaPredicted RBP15.41■□□□□ 0.06
CTSA-207ENST00000484855 TRA2AQ13595 282 aaKnown RBP eCLIP15.41■□□□□ 0.06
CTSA-207ENST00000484855 GINS1Q14691 196 aa15.41■□□□□ 0.06
CTSA-207ENST00000484855 EBPQ15125 230 aaKnown RBP15.41■□□□□ 0.06
CTSA-207ENST00000484855 GPR107Q5VW38 600 aa15.41■□□□□ 0.06
CTSA-207ENST00000484855 HLA-DQA1Q5Y7H0 255 aa15.41■□□□□ 0.06
CTSA-207ENST00000484855 GTF2IRD2BQ6EKJ0 949 aa15.41■□□□□ 0.06
CTSA-207ENST00000484855 WDR88Q6ZMY6 472 aa15.41■□□□□ 0.06
CTSA-207ENST00000484855 ZNF550Q7Z398 422 aa15.41■□□□□ 0.06
CTSA-207ENST00000484855 GTF2IRD2Q86UP8 949 aa15.41■□□□□ 0.06
CTSA-207ENST00000484855 C9orf40Q8IXQ3 194 aa15.41■□□□□ 0.06
CTSA-207ENST00000484855 OR1N1Q8NGS0 311 aa15.41■□□□□ 0.06
CTSA-207ENST00000484855 OR4C3Q8NH37 302 aa15.41■□□□□ 0.06
CTSA-207ENST00000484855 GRHL3Q8TE85 626 aa15.41■□□□□ 0.06
CTSA-207ENST00000484855 ATOH1Q92858 354 aaPredicted RBP15.41■□□□□ 0.06
CTSA-207ENST00000484855 SLC35B4Q969S0 331 aa15.41■□□□□ 0.06
CTSA-207ENST00000484855 ADIPOR1Q96A54 375 aa15.41■□□□□ 0.06
CTSA-207ENST00000484855 LOXL4Q96JB6 756 aa15.41■□□□□ 0.06
CTSA-207ENST00000484855 IL4I1Q96RQ9 567 aa15.41■□□□□ 0.06
CTSA-207ENST00000484855 PLA2G12AQ9BZM1 189 aa15.41■□□□□ 0.06
CTSA-207ENST00000484855 HEATR5AQ86XA9 2040 aa15.4■□□□□ 0.06
CTSA-207ENST00000484855 SH3D21A4FU49 640 aa15.4■□□□□ 0.06
CTSA-207ENST00000484855 CLCA1A8K7I4 914 aa15.4■□□□□ 0.06
CTSA-207ENST00000484855 SEC14L2O76054 403 aa15.4■□□□□ 0.06
CTSA-207ENST00000484855 FADS2O95864 444 aaKnown RBP15.4■□□□□ 0.06
CTSA-207ENST00000484855 CSTAP01040 98 aa15.4■□□□□ 0.06
CTSA-207ENST00000484855 HEXBP07686 556 aa15.4■□□□□ 0.06
CTSA-207ENST00000484855 SNRPGP62308 76 aaKnown RBP15.4■□□□□ 0.06
CTSA-207ENST00000484855 ZNF385CQ66K41 422 aaPredicted RBP15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms