RNA–Protein interactions for RNA: ENST00000479739.6

SH3YL1-222, Transcript of SH3 and SYLF domain containing 1, humanhuman

TSL 2

Gene SH3YL1, Length 2,236 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3YL1-222ENST00000479739 IQCHQ86VS3 1027 aa8.5□□□□□ -1.05
SH3YL1-222ENST00000479739 LRRC28Q86X40 367 aaPredicted RBP8.5□□□□□ -1.05
SH3YL1-222ENST00000479739 IQCF1Q8N6M8 205 aa8.5□□□□□ -1.05
SH3YL1-222ENST00000479739 LRRC17Q8N6Y2 441 aa8.5□□□□□ -1.05
SH3YL1-222ENST00000479739 ZNF485Q8NCK3 441 aa8.5□□□□□ -1.05
SH3YL1-222ENST00000479739 MORN4Q8NDC4 146 aa8.5□□□□□ -1.05
SH3YL1-222ENST00000479739 TREX2Q9BQ50 279 aaPredicted RBP8.5□□□□□ -1.05
SH3YL1-222ENST00000479739 ZDHHC5Q9C0B5 715 aa8.5□□□□□ -1.05
SH3YL1-222ENST00000479739 PITHD1Q9GZP4 211 aaPredicted RBP8.5□□□□□ -1.05
SH3YL1-222ENST00000479739 RHBGQ9H310 441 aa8.5□□□□□ -1.05
SH3YL1-222ENST00000479739 MVB12BQ9H7P6 319 aa8.5□□□□□ -1.05
SH3YL1-222ENST00000479739 WDR70Q9NW82 654 aa8.5□□□□□ -1.05
SH3YL1-222ENST00000479739 CLCA3PQ9Y6N3 262 aa8.5□□□□□ -1.05
SH3YL1-222ENST00000479739 SPTBN2O15020 2390 aa8.5□□□□□ -1.05
SH3YL1-222ENST00000479739 TBC1D3DA0A087WVF3 549 aa8.5□□□□□ -1.05
SH3YL1-222ENST00000479739 TBC1D3IA0A087WXS9 549 aa8.5□□□□□ -1.05
SH3YL1-222ENST00000479739 TBC1D3EA0A087X179 549 aa8.5□□□□□ -1.05
SH3YL1-222ENST00000479739 TBC1D3KA0A087X1G2 549 aa8.5□□□□□ -1.05
SH3YL1-222ENST00000479739 C17orf113A0A1B0GUU1 675 aa8.5□□□□□ -1.05
SH3YL1-222ENST00000479739 TBC1D3FA6NER0 549 aaPredicted RBP8.5□□□□□ -1.05
SH3YL1-222ENST00000479739 ISM1B1AKI9 464 aa8.5□□□□□ -1.05
SH3YL1-222ENST00000479739 TBC1D3LB9A6J9 549 aa8.5□□□□□ -1.05
SH3YL1-222ENST00000479739 GABRPO00591 440 aa8.5□□□□□ -1.05
SH3YL1-222ENST00000479739 UBXN7O94888 489 aa8.5□□□□□ -1.05
SH3YL1-222ENST00000479739 SYPP08247 313 aa8.5□□□□□ -1.05
SH3YL1-222ENST00000479739 TBC1D3HP0C7X1 549 aa8.5□□□□□ -1.05
SH3YL1-222ENST00000479739 LIMS3P0CW19 117 aa8.5□□□□□ -1.05
SH3YL1-222ENST00000479739 LIMS4P0CW20 117 aa8.5□□□□□ -1.05
SH3YL1-222ENST00000479739 XPAP23025 273 aaPredicted RBP8.5□□□□□ -1.05
SH3YL1-222ENST00000479739 SLC6A1P30531 599 aa8.5□□□□□ -1.05
SH3YL1-222ENST00000479739 MTNR1BP49286 362 aa8.5□□□□□ -1.05
SH3YL1-222ENST00000479739 TRA2BP62995 288 aaKnown RBP8.5□□□□□ -1.05
SH3YL1-222ENST00000479739 TSPAN31Q12999 210 aa8.5□□□□□ -1.05
SH3YL1-222ENST00000479739 PIN1Q13526 163 aaPredicted RBP8.5□□□□□ -1.05
SH3YL1-222ENST00000479739 ZNF658BQ4V348 819 aaPredicted RBP8.5□□□□□ -1.05
SH3YL1-222ENST00000479739 PRAMEF14Q5SWL7 426 aa8.5□□□□□ -1.05
SH3YL1-222ENST00000479739 PRAMEF13Q5VWM6 474 aa8.5□□□□□ -1.05
SH3YL1-222ENST00000479739 TBC1D3GQ6DHY5 549 aa8.5□□□□□ -1.05
SH3YL1-222ENST00000479739 LAMTOR1Q6IAA8 161 aa8.5□□□□□ -1.05
SH3YL1-222ENST00000479739 TBC1D3CQ6IPX1 549 aa8.5□□□□□ -1.05
SH3YL1-222ENST00000479739 BHLHB9Q6PI77 547 aa8.5□□□□□ -1.05
SH3YL1-222ENST00000479739 TMEM107Q6UX40 140 aa8.5□□□□□ -1.05
SH3YL1-222ENST00000479739 WDR53Q7Z5U6 358 aaPredicted RBP8.5□□□□□ -1.05
SH3YL1-222ENST00000479739 AMIGO1Q86WK6 493 aa8.5□□□□□ -1.05
SH3YL1-222ENST00000479739 TBC1D3Q8IZP1 549 aaPredicted RBP8.5□□□□□ -1.05
SH3YL1-222ENST00000479739 UBE2J2Q8N2K1 259 aa8.5□□□□□ -1.05
SH3YL1-222ENST00000479739 OR4D11Q8NGI4 311 aa8.5□□□□□ -1.05
SH3YL1-222ENST00000479739 SLC9A6Q92581 669 aa8.5□□□□□ -1.05
SH3YL1-222ENST00000479739 ZNF514Q96K75 400 aaPredicted RBP8.5□□□□□ -1.05
SH3YL1-222ENST00000479739 SLC35G5Q96KT7 338 aa8.5□□□□□ -1.05
SH3YL1-222ENST00000479739 GPR137Q96N19 417 aa8.5□□□□□ -1.05
SH3YL1-222ENST00000479739 TM9SF2Q99805 663 aa8.5□□□□□ -1.05
SH3YL1-222ENST00000479739 SAP130Q9H0E3 1048 aa8.5□□□□□ -1.05
SH3YL1-222ENST00000479739 DPEP2Q9H4A9 486 aa8.5□□□□□ -1.05
SH3YL1-222ENST00000479739 PELI2Q9HAT8 420 aa8.5□□□□□ -1.05
SH3YL1-222ENST00000479739 EMC7Q9NPA0 242 aa8.5□□□□□ -1.05
SH3YL1-222ENST00000479739 ADAM29Q9UKF5 820 aa8.5□□□□□ -1.05
SH3YL1-222ENST00000479739 ZFR2Q9UPR6 939 aaKnown RBP8.5□□□□□ -1.05
SH3YL1-222ENST00000479739 LIPT1Q9Y234 373 aa8.5□□□□□ -1.05
SH3YL1-222ENST00000479739 EXOGQ9Y2C4 368 aaKnown RBP8.5□□□□□ -1.05
SH3YL1-222ENST00000479739 AUP1Q9Y679 476 aa8.5□□□□□ -1.05
SH3YL1-222ENST00000479739 RNF215Q9Y6U7 377 aa8.5□□□□□ -1.05
SH3YL1-222ENST00000479739 ASPMQ8IZT6 3477 aa8.5□□□□□ -1.05
SH3YL1-222ENST00000479739 CABIN1Q9Y6J0 2220 aa8.49□□□□□ -1.05
SH3YL1-222ENST00000479739 LRRK1Q38SD2 2015 aa8.49□□□□□ -1.05
SH3YL1-222ENST00000479739 GIMAP1-GIMAP5A0A087WTJ2 511 aa8.49□□□□□ -1.05
SH3YL1-222ENST00000479739 A0A1W2PR77 199 aa8.49□□□□□ -1.05
SH3YL1-222ENST00000479739 ZSCAN5BA6NJL1 495 aa8.49□□□□□ -1.05
SH3YL1-222ENST00000479739 SYT5O00445 386 aa8.49□□□□□ -1.05
SH3YL1-222ENST00000479739 WNT1P04628 370 aa8.49□□□□□ -1.05
SH3YL1-222ENST00000479739 NR2F1P10589 423 aa8.49□□□□□ -1.05
SH3YL1-222ENST00000479739 CD53P19397 219 aa8.49□□□□□ -1.05
SH3YL1-222ENST00000479739 RBMS1P29558 406 aaKnown RBP8.49□□□□□ -1.05
SH3YL1-222ENST00000479739 PDHA2P29803 388 aa8.49□□□□□ -1.05
SH3YL1-222ENST00000479739 CCT3P49368 545 aaKnown RBP8.49□□□□□ -1.05
SH3YL1-222ENST00000479739 CSNK1EP49674 416 aaKnown RBP8.49□□□□□ -1.05
SH3YL1-222ENST00000479739 KHKP50053 298 aa8.49□□□□□ -1.05
SH3YL1-222ENST00000479739 CDH11P55287 796 aa8.49□□□□□ -1.05
SH3YL1-222ENST00000479739 TSTA3Q13630 321 aaPredicted RBP8.49□□□□□ -1.05
SH3YL1-222ENST00000479739 P2RY14Q15391 338 aa8.49□□□□□ -1.05
SH3YL1-222ENST00000479739 TRAM1Q15629 374 aa8.49□□□□□ -1.05
SH3YL1-222ENST00000479739 COL28A1Q2UY09 1125 aa8.49□□□□□ -1.05
SH3YL1-222ENST00000479739 KHDRBS2Q5VWX1 349 aaKnown RBP8.49□□□□□ -1.05
SH3YL1-222ENST00000479739 FAM129CQ86XR2 697 aa8.49□□□□□ -1.05
SH3YL1-222ENST00000479739 MARCH9Q86YJ5 346 aa8.49□□□□□ -1.05
SH3YL1-222ENST00000479739 SLC38A6Q8IZM9 456 aa8.49□□□□□ -1.05
SH3YL1-222ENST00000479739 C9orf62Q8N4C0 152 aa8.49□□□□□ -1.05
SH3YL1-222ENST00000479739 SYT14Q8NB59 555 aa8.49□□□□□ -1.05
SH3YL1-222ENST00000479739 OR5M3Q8NGP4 307 aa8.49□□□□□ -1.05
SH3YL1-222ENST00000479739 SUN3Q8TAQ9 357 aa8.49□□□□□ -1.05
SH3YL1-222ENST00000479739 OSTF1Q92882 214 aa8.49□□□□□ -1.05
SH3YL1-222ENST00000479739 UCN3Q969E3 161 aa8.49□□□□□ -1.05
SH3YL1-222ENST00000479739 RAB7BQ96AH8 199 aa8.49□□□□□ -1.05
SH3YL1-222ENST00000479739 TM4SF18Q96CE8 201 aa8.49□□□□□ -1.05
SH3YL1-222ENST00000479739 GIMAP5Q96F15 307 aa8.49□□□□□ -1.05
SH3YL1-222ENST00000479739 PINK1Q9BXM7 581 aa8.49□□□□□ -1.05
SH3YL1-222ENST00000479739 MED28Q9H204 178 aa8.49□□□□□ -1.05
SH3YL1-222ENST00000479739 RERGLQ9H628 205 aa8.49□□□□□ -1.05
SH3YL1-222ENST00000479739 B3GAT2Q9NPZ5 323 aa8.49□□□□□ -1.05
SH3YL1-222ENST00000479739 SIRT3Q9NTG7 399 aaPredicted RBP8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms