RNA–Protein interactions for RNA: ENST00000473470.1

CNOT4-209, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 2

Gene CNOT4, Length 707 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-209ENST00000473470 CELSR2Q9HCU4 2923 aa3.57□□□□□ -1.84
CNOT4-209ENST00000473470 IL1RAPQ9NPH3 570 aa3.57□□□□□ -1.84
CNOT4-209ENST00000473470 RPS10P5Q9NQ39 176 aa3.57□□□□□ -1.84
CNOT4-209ENST00000473470 HOMER3Q9NSC5 361 aa3.57□□□□□ -1.84
CNOT4-209ENST00000473470 FAM212BQ9NTI7 297 aaPredicted RBP3.57□□□□□ -1.84
CNOT4-209ENST00000473470 EPS15L1Q9UBC2 864 aa3.57□□□□□ -1.84
CNOT4-209ENST00000473470 FAM153AQ9UHL3 310 aa3.57□□□□□ -1.84
CNOT4-209ENST00000473470 RARRES3Q9UL19 164 aa3.57□□□□□ -1.84
CNOT4-209ENST00000473470 PDZD2O15018 2839 aa3.57□□□□□ -1.84
CNOT4-209ENST00000473470 F5P12259 2224 aa3.56□□□□□ -1.84
CNOT4-209ENST00000473470 ZFC3H1O60293 1989 aaKnown RBP3.56□□□□□ -1.84
CNOT4-209ENST00000473470 TDRD15B5MCY1 1934 aaKnown RBP3.56□□□□□ -1.84
CNOT4-209ENST00000473470 FOCADQ5VW36 1801 aa3.56□□□□□ -1.84
CNOT4-209ENST00000473470 SH3PXD2BA1X283 911 aa3.56□□□□□ -1.84
CNOT4-209ENST00000473470 YJEFN3A6XGL0 299 aa3.56□□□□□ -1.84
CNOT4-209ENST00000473470 ZNF724A8MTY0 619 aa3.56□□□□□ -1.84
CNOT4-209ENST00000473470 SNAP91O60641 907 aa3.56□□□□□ -1.84
CNOT4-209ENST00000473470 CSO75390 466 aaKnown RBP3.56□□□□□ -1.84
CNOT4-209ENST00000473470 TRIM16O95361 564 aa3.56□□□□□ -1.84
CNOT4-209ENST00000473470 FHP07954 510 aa3.56□□□□□ -1.84
CNOT4-209ENST00000473470 SMIM10L2AP0DMW4 78 aa3.56□□□□□ -1.84
CNOT4-209ENST00000473470 SMIM10L2BP0DMW5 78 aa3.56□□□□□ -1.84
CNOT4-209ENST00000473470 RPL9P32969 192 aaKnown RBP3.56□□□□□ -1.84
CNOT4-209ENST00000473470 RBMXP38159 391 aaKnown RBP3.56□□□□□ -1.84
CNOT4-209ENST00000473470 CCL11P51671 97 aa3.56□□□□□ -1.84
CNOT4-209ENST00000473470 RPL27P61353 136 aaKnown RBP3.56□□□□□ -1.84
CNOT4-209ENST00000473470 CDKL1Q00532 357 aa3.56□□□□□ -1.84
CNOT4-209ENST00000473470 KNOP1Q1ED39 458 aaKnown RBP3.56□□□□□ -1.84
CNOT4-209ENST00000473470 GPAT3Q53EU6 434 aa3.56□□□□□ -1.84
CNOT4-209ENST00000473470 RTL6Q6ICC9 239 aa3.56□□□□□ -1.84
CNOT4-209ENST00000473470 Q6ZRG5 221 aa3.56□□□□□ -1.84
CNOT4-209ENST00000473470 TBC1D10CQ8IV04 446 aa3.56□□□□□ -1.84
CNOT4-209ENST00000473470 ITFG1Q8TB96 612 aa3.56□□□□□ -1.84
CNOT4-209ENST00000473470 TCP11Q8WWU5 503 aa3.56□□□□□ -1.84
CNOT4-209ENST00000473470 FAM3CQ92520 227 aa3.56□□□□□ -1.84
CNOT4-209ENST00000473470 MRPL24Q96A35 216 aaKnown RBP3.56□□□□□ -1.84
CNOT4-209ENST00000473470 C14orf79Q96F83 325 aa3.56□□□□□ -1.84
CNOT4-209ENST00000473470 FAM111AQ96PZ2 611 aa3.56□□□□□ -1.84
CNOT4-209ENST00000473470 ALKBH3Q96Q83 286 aaPredicted RBP3.56□□□□□ -1.84
CNOT4-209ENST00000473470 KCNK16Q96T55 309 aa3.56□□□□□ -1.84
CNOT4-209ENST00000473470 CHCHD5Q9BSY4 110 aa3.56□□□□□ -1.84
CNOT4-209ENST00000473470 SIRPDQ9H106 197 aa3.56□□□□□ -1.84
CNOT4-209ENST00000473470 GDF3Q9NR23 364 aa3.56□□□□□ -1.84
CNOT4-209ENST00000473470 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP3.56□□□□□ -1.84
CNOT4-209ENST00000473470 VPS54Q9P1Q0 977 aa3.56□□□□□ -1.84
CNOT4-209ENST00000473470 SPASTQ9UBP0 616 aa3.56□□□□□ -1.84
CNOT4-209ENST00000473470 HOOK1Q9UJC3 728 aaKnown RBP3.56□□□□□ -1.84
CNOT4-209ENST00000473470 PLEKHA6Q9Y2H5 1048 aa3.56□□□□□ -1.84
CNOT4-209ENST00000473470 FN1P02751 2386 aaKnown RBP3.56□□□□□ -1.84
CNOT4-209ENST00000473470 HELZP42694 1942 aaKnown RBP3.56□□□□□ -1.84
CNOT4-209ENST00000473470 ANKHD1Q8IWZ3 2542 aaKnown RBP3.55□□□□□ -1.84
CNOT4-209ENST00000473470 HIVEP3Q5T1R4 2406 aa3.55□□□□□ -1.84
CNOT4-209ENST00000473470 UBE4BO95155 1302 aa3.55□□□□□ -1.84
CNOT4-209ENST00000473470 RAD50Q92878 1312 aa3.55□□□□□ -1.84
CNOT4-209ENST00000473470 IGLV4-3A0A075B6K6 122 aa3.55□□□□□ -1.84
CNOT4-209ENST00000473470 A0A0U1RRA0 63 aa3.55□□□□□ -1.84
CNOT4-209ENST00000473470 TRIM49BA6NDI0 452 aa3.55□□□□□ -1.84
CNOT4-209ENST00000473470 KRTAP9-6A8MVA2 160 aa3.55□□□□□ -1.84
CNOT4-209ENST00000473470 RRP8O43159 456 aaKnown RBP3.55□□□□□ -1.84
CNOT4-209ENST00000473470 SSX5O60225 188 aa3.55□□□□□ -1.84
CNOT4-209ENST00000473470 ANXA9O76027 345 aa3.55□□□□□ -1.84
CNOT4-209ENST00000473470 SYNGR4O95473 234 aa3.55□□□□□ -1.84
CNOT4-209ENST00000473470 POP4O95707 220 aaKnown RBP3.55□□□□□ -1.84
CNOT4-209ENST00000473470 HOXD4P09016 255 aaPredicted RBP3.55□□□□□ -1.84
CNOT4-209ENST00000473470 HIST1H2AGP0C0S8 130 aaPredicted RBP3.55□□□□□ -1.84
CNOT4-209ENST00000473470 PPP2R1AP30153 589 aa3.55□□□□□ -1.84
CNOT4-209ENST00000473470 RABIFP47224 123 aa3.55□□□□□ -1.84
CNOT4-209ENST00000473470 NUMBP49757 651 aa3.55□□□□□ -1.84
CNOT4-209ENST00000473470 FKBP3Q00688 224 aaKnown RBP3.55□□□□□ -1.84
CNOT4-209ENST00000473470 PEX6Q13608 980 aa3.55□□□□□ -1.84
CNOT4-209ENST00000473470 P2RY14Q15391 338 aa3.55□□□□□ -1.84
CNOT4-209ENST00000473470 WDR88Q6ZMY6 472 aa3.55□□□□□ -1.84
CNOT4-209ENST00000473470 ZNF841Q6ZN19 808 aa3.55□□□□□ -1.84
CNOT4-209ENST00000473470 HIST2H2ABQ8IUE6 130 aaPredicted RBP3.55□□□□□ -1.84
CNOT4-209ENST00000473470 ABHD12Q8N2K0 398 aa3.55□□□□□ -1.84
CNOT4-209ENST00000473470 DQX1Q8TE96 717 aaKnown RBP3.55□□□□□ -1.84
CNOT4-209ENST00000473470 DNAJB3Q8WWF6 145 aa3.55□□□□□ -1.84
CNOT4-209ENST00000473470 RLN3Q8WXF3 142 aa3.55□□□□□ -1.84
CNOT4-209ENST00000473470 P3H4Q92791 437 aa3.55□□□□□ -1.84
CNOT4-209ENST00000473470 HIST1H2ACQ93077 130 aa3.55□□□□□ -1.84
CNOT4-209ENST00000473470 ZNF707Q96C28 371 aaPredicted RBP3.55□□□□□ -1.84
CNOT4-209ENST00000473470 B3GALT6Q96L58 329 aa3.55□□□□□ -1.84
CNOT4-209ENST00000473470 SAMD8Q96LT4 415 aa3.55□□□□□ -1.84
CNOT4-209ENST00000473470 ZNF597Q96LX8 424 aa3.55□□□□□ -1.84
CNOT4-209ENST00000473470 CBWD1Q9BRT8 395 aa3.55□□□□□ -1.84
CNOT4-209ENST00000473470 ATG10Q9H0Y0 220 aa3.55□□□□□ -1.84
CNOT4-209ENST00000473470 PLEKHA3Q9HB20 300 aa3.55□□□□□ -1.84
CNOT4-209ENST00000473470 FAM120CQ9NX05 1096 aaKnown RBP3.55□□□□□ -1.84
CNOT4-209ENST00000473470 THAP10Q9P2Z0 257 aaPredicted RBP3.55□□□□□ -1.84
CNOT4-209ENST00000473470 COPS7AQ9UBW8 275 aa3.55□□□□□ -1.84
CNOT4-209ENST00000473470 GINS2Q9Y248 185 aa3.55□□□□□ -1.84
CNOT4-209ENST00000473470 PI4KAP42356 2102 aa3.55□□□□□ -1.84
CNOT4-209ENST00000473470 MYH8P13535 1937 aa3.54□□□□□ -1.84
CNOT4-209ENST00000473470 DOCK5Q9H7D0 1870 aa3.54□□□□□ -1.84
CNOT4-209ENST00000473470 TRBV5-4A0A0C4DH59 114 aa3.54□□□□□ -1.84
CNOT4-209ENST00000473470 LOC390937A0A1W2PQ73 354 aa3.54□□□□□ -1.84
CNOT4-209ENST00000473470 TMEM89A2RUT3 159 aa3.54□□□□□ -1.84
CNOT4-209ENST00000473470 ARHGEF33A8MVX0 844 aa3.54□□□□□ -1.84
CNOT4-209ENST00000473470 MEI4A8MW99 385 aa3.54□□□□□ -1.84
CNOT4-209ENST00000473470 TMCO5BA8MYB1 307 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 91 ms