RNA–Protein interactions for RNA: ENST00000469585.5

PTCD3-208, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 885 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-208ENST00000469585 PRTFDC1Q9NRG1 225 aa5.78□□□□□ -1.48
PTCD3-208ENST00000469585 TMEM45AQ9NWC5 275 aa5.78□□□□□ -1.48
PTCD3-208ENST00000469585 PSD3Q9NYI0 1048 aa5.78□□□□□ -1.48
PTCD3-208ENST00000469585 C5AR2Q9P296 337 aa5.78□□□□□ -1.48
PTCD3-208ENST00000469585 COPG2Q9UBF2 871 aa5.78□□□□□ -1.48
PTCD3-208ENST00000469585 LGALS13Q9UHV8 139 aa5.78□□□□□ -1.48
PTCD3-208ENST00000469585 ANAPC2Q9UJX6 822 aa5.78□□□□□ -1.48
PTCD3-208ENST00000469585 PCTPQ9UKL6 214 aa5.78□□□□□ -1.48
PTCD3-208ENST00000469585 HSF4Q9ULV5 492 aa5.78□□□□□ -1.48
PTCD3-208ENST00000469585 LAMP3Q9UQV4 416 aa5.78□□□□□ -1.48
PTCD3-208ENST00000469585 CHD8Q9HCK8 2581 aa5.78□□□□□ -1.48
PTCD3-208ENST00000469585 AHCTF1Q8WYP5 2266 aa5.78□□□□□ -1.48
PTCD3-208ENST00000469585 IGLV3-12A0A075B6K2 115 aa5.77□□□□□ -1.49
PTCD3-208ENST00000469585 SH2D7A6NKC9 451 aaPredicted RBP5.77□□□□□ -1.49
PTCD3-208ENST00000469585 VSTM2BA6NLU5 285 aa5.77□□□□□ -1.49
PTCD3-208ENST00000469585 TMEM114B3SHH9 223 aa5.77□□□□□ -1.49
PTCD3-208ENST00000469585 H3BMH7 237 aa5.77□□□□□ -1.49
PTCD3-208ENST00000469585 SLC28A1O00337 649 aa5.77□□□□□ -1.49
PTCD3-208ENST00000469585 ADAM10O14672 748 aa5.77□□□□□ -1.49
PTCD3-208ENST00000469585 PLIN3O60664 434 aa5.77□□□□□ -1.49
PTCD3-208ENST00000469585 KLF7O75840 302 aaPredicted RBP5.77□□□□□ -1.49
PTCD3-208ENST00000469585 SIX3O95343 332 aaPredicted RBP5.77□□□□□ -1.49
PTCD3-208ENST00000469585 HSPA4LO95757 839 aa5.77□□□□□ -1.49
PTCD3-208ENST00000469585 C1QAP02745 245 aa5.77□□□□□ -1.49
PTCD3-208ENST00000469585 RPS17P08708 135 aaKnown RBP5.77□□□□□ -1.49
PTCD3-208ENST00000469585 UROSP10746 265 aa5.77□□□□□ -1.49
PTCD3-208ENST00000469585 FCGR2AP12318 317 aa5.77□□□□□ -1.49
PTCD3-208ENST00000469585 HIST1H1TP22492 207 aaPredicted RBP5.77□□□□□ -1.49
PTCD3-208ENST00000469585 F8A1P23610 371 aa5.77□□□□□ -1.49
PTCD3-208ENST00000469585 NAGLUP54802 743 aa5.77□□□□□ -1.49
PTCD3-208ENST00000469585 DNAJB13P59910 316 aa5.77□□□□□ -1.49
PTCD3-208ENST00000469585 MAT1AQ00266 395 aaKnown RBP5.77□□□□□ -1.49
PTCD3-208ENST00000469585 EEF1A2Q05639 463 aaKnown RBP5.77□□□□□ -1.49
PTCD3-208ENST00000469585 MAD2L1Q13257 205 aaPredicted RBP5.77□□□□□ -1.49
PTCD3-208ENST00000469585 SLAMF1Q13291 335 aa5.77□□□□□ -1.49
PTCD3-208ENST00000469585 IL13RA2Q14627 380 aa5.77□□□□□ -1.49
PTCD3-208ENST00000469585 HEPACAMQ14CZ8 416 aa5.77□□□□□ -1.49
PTCD3-208ENST00000469585 VWA2Q5GFL6 755 aa5.77□□□□□ -1.49
PTCD3-208ENST00000469585 ZNF626Q68DY1 528 aa5.77□□□□□ -1.49
PTCD3-208ENST00000469585 ISLR2Q6UXK2 745 aa5.77□□□□□ -1.49
PTCD3-208ENST00000469585 QSOX2Q6ZRP7 698 aa5.77□□□□□ -1.49
PTCD3-208ENST00000469585 VN1R4Q7Z5H5 301 aa5.77□□□□□ -1.49
PTCD3-208ENST00000469585 GPR180Q86V85 440 aa5.77□□□□□ -1.49
PTCD3-208ENST00000469585 NUDCD3Q8IVD9 361 aa5.77□□□□□ -1.49
PTCD3-208ENST00000469585 DDIASQ8IXT1 998 aa5.77□□□□□ -1.49
PTCD3-208ENST00000469585 FAM9CQ8IZT9 166 aa5.77□□□□□ -1.49
PTCD3-208ENST00000469585 ACOT4Q8N9L9 421 aa5.77□□□□□ -1.49
PTCD3-208ENST00000469585 OR4F6Q8NGB9 312 aa5.77□□□□□ -1.49
PTCD3-208ENST00000469585 ZDHHC19Q8WVZ1 309 aaPredicted RBP5.77□□□□□ -1.49
PTCD3-208ENST00000469585 TANKQ92844 425 aa5.77□□□□□ -1.49
PTCD3-208ENST00000469585 MS4A6EQ96DS6 147 aa5.77□□□□□ -1.49
PTCD3-208ENST00000469585 L3HYPDHQ96EM0 354 aa5.77□□□□□ -1.49
PTCD3-208ENST00000469585 PGM2Q96G03 612 aa5.77□□□□□ -1.49
PTCD3-208ENST00000469585 ZNF354BQ96LW1 612 aa5.77□□□□□ -1.49
PTCD3-208ENST00000469585 FAM111AQ96PZ2 611 aa5.77□□□□□ -1.49
PTCD3-208ENST00000469585 F2RL3Q96RI0 385 aa5.77□□□□□ -1.49
PTCD3-208ENST00000469585 TMEM109Q9BVC6 243 aa5.77□□□□□ -1.49
PTCD3-208ENST00000469585 KRTAP17-1Q9BYP8 105 aa5.77□□□□□ -1.49
PTCD3-208ENST00000469585 DEFB126Q9BYW3 111 aa5.77□□□□□ -1.49
PTCD3-208ENST00000469585 VN1R1Q9GZP7 353 aa5.77□□□□□ -1.49
PTCD3-208ENST00000469585 OR51B5Q9H339 312 aa5.77□□□□□ -1.49
PTCD3-208ENST00000469585 RPF2Q9H7B2 306 aaKnown RBP5.77□□□□□ -1.49
PTCD3-208ENST00000469585 KCNK13Q9HB14 408 aa5.77□□□□□ -1.49
PTCD3-208ENST00000469585 ZNF160Q9HCG1 818 aa5.77□□□□□ -1.49
PTCD3-208ENST00000469585 PNO1Q9NRX1 252 aaKnown RBP5.77□□□□□ -1.49
PTCD3-208ENST00000469585 TMEM216Q9P0N5 145 aa5.77□□□□□ -1.49
PTCD3-208ENST00000469585 VPS29Q9UBQ0 182 aa5.77□□□□□ -1.49
PTCD3-208ENST00000469585 ZNF69Q9UC07 566 aa5.77□□□□□ -1.49
PTCD3-208ENST00000469585 UTS2RQ9UKP6 389 aa5.77□□□□□ -1.49
PTCD3-208ENST00000469585 FBXW2Q9UKT8 454 aa5.77□□□□□ -1.49
PTCD3-208ENST00000469585 IKZF3Q9UKT9 509 aa5.77□□□□□ -1.49
PTCD3-208ENST00000469585 ZNF490Q9ULM2 529 aaPredicted RBP5.77□□□□□ -1.49
PTCD3-208ENST00000469585 ENTPD4Q9Y227 616 aa5.77□□□□□ -1.49
PTCD3-208ENST00000469585 PLLPQ9Y342 182 aa5.77□□□□□ -1.49
PTCD3-208ENST00000469585 ZNF780BQ9Y6R6 833 aa5.77□□□□□ -1.49
PTCD3-208ENST00000469585 IGF2RP11717 2491 aa5.77□□□□□ -1.49
PTCD3-208ENST00000469585 DNAH14Q0VDD8 3507 aa5.77□□□□□ -1.49
PTCD3-208ENST00000469585 MAP1BP46821 2468 aaKnown RBP5.76□□□□□ -1.49
PTCD3-208ENST00000469585 ANKRD11Q6UB99 2663 aaPredicted RBP5.76□□□□□ -1.49
PTCD3-208ENST00000469585 A0A0G2JK05 382 aa5.76□□□□□ -1.49
PTCD3-208ENST00000469585 A0A0G2JN53 185 aa5.76□□□□□ -1.49
PTCD3-208ENST00000469585 A0A1W2PPM1 405 aa5.76□□□□□ -1.49
PTCD3-208ENST00000469585 TMEM247A6NEH6 219 aa5.76□□□□□ -1.49
PTCD3-208ENST00000469585 A8MUI8 341 aa5.76□□□□□ -1.49
PTCD3-208ENST00000469585 SAP18O00422 153 aaKnown RBP5.76□□□□□ -1.49
PTCD3-208ENST00000469585 HCRTR1O43613 425 aa5.76□□□□□ -1.49
PTCD3-208ENST00000469585 SLC28A2O43868 658 aa5.76□□□□□ -1.49
PTCD3-208ENST00000469585 SH3BGRLO75368 114 aa5.76□□□□□ -1.49
PTCD3-208ENST00000469585 SPAG7O75391 227 aa5.76□□□□□ -1.49
PTCD3-208ENST00000469585 OR4F21O95013 312 aa5.76□□□□□ -1.49
PTCD3-208ENST00000469585 SERPINA7P05543 415 aa5.76□□□□□ -1.49
PTCD3-208ENST00000469585 LCKP06239 509 aa5.76□□□□□ -1.49
PTCD3-208ENST00000469585 CAPN1P07384 714 aa5.76□□□□□ -1.49
PTCD3-208ENST00000469585 FAM58BPP0C7Q3 252 aa5.76□□□□□ -1.49
PTCD3-208ENST00000469585 ATP5A1P25705 553 aaKnown RBP5.76□□□□□ -1.49
PTCD3-208ENST00000469585 NTSP30990 170 aa5.76□□□□□ -1.49
PTCD3-208ENST00000469585 HNRNPH1P31943 449 aaKnown RBP5.76□□□□□ -1.49
PTCD3-208ENST00000469585 RPL3P39023 403 aaKnown RBP5.76□□□□□ -1.49
PTCD3-208ENST00000469585 CDH13P55290 713 aa5.76□□□□□ -1.49
PTCD3-208ENST00000469585 TRA2BP62995 288 aaKnown RBP5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms