RNA–Protein interactions for RNA: ENST00000465471.5

SKA3-205, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 5

Gene SKA3, Length 930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-205ENST00000465471 TNFRSF10DQ9UBN6 386 aa18.45■□□□□ 0.54
SKA3-205ENST00000465471 CAPN7Q9Y6W3 813 aa18.45■□□□□ 0.54
SKA3-205ENST00000465471 DOPEY1Q5JWR5 2465 aa18.45■□□□□ 0.54
SKA3-205ENST00000465471 DSPPQ9NZW4 1301 aa18.45■□□□□ 0.54
SKA3-205ENST00000465471 MED12Q93074 2177 aa18.44■□□□□ 0.54
SKA3-205ENST00000465471 WIPF3A6NGB9 483 aa18.44■□□□□ 0.54
SKA3-205ENST00000465471 BBIP1A8MTZ0 92 aa18.44■□□□□ 0.54
SKA3-205ENST00000465471 LRRTM2O43300 516 aa18.44■□□□□ 0.54
SKA3-205ENST00000465471 TPOP07202 933 aa18.44■□□□□ 0.54
SKA3-205ENST00000465471 GPX2P18283 190 aa18.44■□□□□ 0.54
SKA3-205ENST00000465471 RPS4Y1P22090 263 aaKnown RBP18.44■□□□□ 0.54
SKA3-205ENST00000465471 B3GALT5-AS1P59052 145 aa18.44■□□□□ 0.54
SKA3-205ENST00000465471 HPCAP84074 193 aa18.44■□□□□ 0.54
SKA3-205ENST00000465471 ZNF117Q03924 483 aa18.44■□□□□ 0.54
SKA3-205ENST00000465471 TOMM20Q15388 145 aa18.44■□□□□ 0.54
SKA3-205ENST00000465471 MAPRE2Q15555 327 aa18.44■□□□□ 0.54
SKA3-205ENST00000465471 ZNF630Q2M218 657 aaPredicted RBP18.44■□□□□ 0.54
SKA3-205ENST00000465471 GPAT3Q53EU6 434 aa18.44■□□□□ 0.54
SKA3-205ENST00000465471 RUNDC3AQ59EK9 446 aa18.44■□□□□ 0.54
SKA3-205ENST00000465471 OR14L1PQ8NHC6 308 aa18.44■□□□□ 0.54
SKA3-205ENST00000465471 CGREF1Q99674 301 aa18.44■□□□□ 0.54
SKA3-205ENST00000465471 FAM107BQ9H098 131 aa18.44■□□□□ 0.54
SKA3-205ENST00000465471 EXO5Q9H790 373 aa18.44■□□□□ 0.54
SKA3-205ENST00000465471 PTGES2Q9H7Z7 377 aa18.44■□□□□ 0.54
SKA3-205ENST00000465471 A4GALTQ9NPC4 353 aa18.44■□□□□ 0.54
SKA3-205ENST00000465471 PNPLA3Q9NST1 481 aa18.44■□□□□ 0.54
SKA3-205ENST00000465471 ARMCX1Q9P291 453 aa18.44■□□□□ 0.54
SKA3-205ENST00000465471 DKKL1Q9UK85 242 aa18.44■□□□□ 0.54
SKA3-205ENST00000465471 SLC6A5Q9Y345 797 aa18.44■□□□□ 0.54
SKA3-205ENST00000465471 L3MBTL1Q9Y468 752 aa18.44■□□□□ 0.54
SKA3-205ENST00000465471 SERINC4A6NH21 518 aa18.43■□□□□ 0.54
SKA3-205ENST00000465471 OIP5O43482 229 aa18.43■□□□□ 0.54
SKA3-205ENST00000465471 CCDC22O60826 627 aa18.43■□□□□ 0.54
SKA3-205ENST00000465471 LDLRP01130 860 aa18.43■□□□□ 0.54
SKA3-205ENST00000465471 NUDT7P0C024 238 aa18.43■□□□□ 0.54
SKA3-205ENST00000465471 BMP7P18075 431 aa18.43■□□□□ 0.54
SKA3-205ENST00000465471 CASP6P55212 293 aa18.43■□□□□ 0.54
SKA3-205ENST00000465471 FGFBP1Q14512 234 aa18.43■□□□□ 0.54
SKA3-205ENST00000465471 TMEM44Q2T9K0 475 aa18.43■□□□□ 0.54
SKA3-205ENST00000465471 GLYR1Q49A26 553 aaPredicted RBP18.43■□□□□ 0.54
SKA3-205ENST00000465471 GXYLT1Q4G148 440 aa18.43■□□□□ 0.54
SKA3-205ENST00000465471 DCST1Q5T197 706 aa18.43■□□□□ 0.54
SKA3-205ENST00000465471 PIGWQ7Z7B1 504 aa18.43■□□□□ 0.54
SKA3-205ENST00000465471 CPLX4Q7Z7G2 160 aa18.43■□□□□ 0.54
SKA3-205ENST00000465471 FJX1Q86VR8 437 aa18.43■□□□□ 0.54
SKA3-205ENST00000465471 IFNEQ86WN2 208 aa18.43■□□□□ 0.54
SKA3-205ENST00000465471 FAM71CQ8NEG0 241 aa18.43■□□□□ 0.54
SKA3-205ENST00000465471 B4GALNT2Q8NHY0 566 aa18.43■□□□□ 0.54
SKA3-205ENST00000465471 PHOSPHO1Q8TCT1 267 aa18.43■□□□□ 0.54
SKA3-205ENST00000465471 SLC38A5Q8WUX1 472 aa18.43■□□□□ 0.54
SKA3-205ENST00000465471 ZG16BQ96DA0 208 aa18.43■□□□□ 0.54
SKA3-205ENST00000465471 ANKRD27Q96NW4 1050 aa18.43■□□□□ 0.54
SKA3-205ENST00000465471 TIMP4Q99727 224 aa18.43■□□□□ 0.54
SKA3-205ENST00000465471 KLHDC3Q9BQ90 382 aa18.43■□□□□ 0.54
SKA3-205ENST00000465471 CCDC106Q9BWC9 280 aa18.43■□□□□ 0.54
SKA3-205ENST00000465471 UGT2B28Q9BY64 529 aa18.43■□□□□ 0.54
SKA3-205ENST00000465471 PRDM14Q9GZV8 571 aa18.43■□□□□ 0.54
SKA3-205ENST00000465471 MYLK2Q9H1R3 596 aa18.43■□□□□ 0.54
SKA3-205ENST00000465471 TP63Q9H3D4 680 aaPredicted RBP18.43■□□□□ 0.54
SKA3-205ENST00000465471 SUCOQ9UBS9 1254 aaKnown RBP18.43■□□□□ 0.54
SKA3-205ENST00000465471 ICAM5Q9UMF0 924 aa18.43■□□□□ 0.54
SKA3-205ENST00000465471 CORO2BQ9UQ03 480 aa18.43■□□□□ 0.54
SKA3-205ENST00000465471 NCOA6Q14686 2063 aaPredicted RBP18.42■□□□□ 0.54
SKA3-205ENST00000465471 C15orf38-AP3S2A0A0A6YYH1 394 aa18.42■□□□□ 0.54
SKA3-205ENST00000465471 AGAP5A6NIR3 686 aa18.42■□□□□ 0.54
SKA3-205ENST00000465471 H3BNH8 94 aa18.42■□□□□ 0.54
SKA3-205ENST00000465471 FXYD1O00168 92 aa18.42■□□□□ 0.54
SKA3-205ENST00000465471 ACTL6AO96019 429 aa18.42■□□□□ 0.54
SKA3-205ENST00000465471 RNF224P0DH78 156 aa18.42■□□□□ 0.54
SKA3-205ENST00000465471 NR2F1P10589 423 aa18.42■□□□□ 0.54
SKA3-205ENST00000465471 CHMP24386 653 aa18.42■□□□□ 0.54
SKA3-205ENST00000465471 RNF144AP50876 292 aaPredicted RBP18.42■□□□□ 0.54
SKA3-205ENST00000465471 SUMO3P55854 103 aaPredicted RBP18.42■□□□□ 0.54
SKA3-205ENST00000465471 PLAURQ03405 335 aa18.42■□□□□ 0.54
SKA3-205ENST00000465471 SKP2Q13309 424 aa18.42■□□□□ 0.54
SKA3-205ENST00000465471 NFYCQ13952 458 aa18.42■□□□□ 0.54
SKA3-205ENST00000465471 TRMT5Q32P41 509 aaKnown RBP18.42■□□□□ 0.54
SKA3-205ENST00000465471 REP15Q6BDI9 236 aa18.42■□□□□ 0.54
SKA3-205ENST00000465471 CBLN3Q6UW01 205 aa18.42■□□□□ 0.54
SKA3-205ENST00000465471 ARSKQ6UWY0 536 aa18.42■□□□□ 0.54
SKA3-205ENST00000465471 SNX32Q86XE0 403 aa18.42■□□□□ 0.54
SKA3-205ENST00000465471 DMRTA2Q96SC8 542 aa18.42■□□□□ 0.54
SKA3-205ENST00000465471 QRSL1Q9H0R6 528 aaKnown RBP18.42■□□□□ 0.54
SKA3-205ENST00000465471 CALML5Q9NZT1 146 aa18.42■□□□□ 0.54
SKA3-205ENST00000465471 NIPSNAP3AQ9UFN0 247 aaPredicted RBP18.42■□□□□ 0.54
SKA3-205ENST00000465471 SH3BGRL2Q9UJC5 107 aa18.42■□□□□ 0.54
SKA3-205ENST00000465471 ACAD8Q9UKU7 415 aa18.42■□□□□ 0.54
SKA3-205ENST00000465471 MEMO1Q9Y316 297 aa18.42■□□□□ 0.54
SKA3-205ENST00000465471 DIDO1Q9BTC0 2240 aaKnown RBP18.42■□□□□ 0.54
SKA3-205ENST00000465471 MYO7BQ6PIF6 2116 aa18.41■□□□□ 0.54
SKA3-205ENST00000465471 HEATR5AQ86XA9 2040 aa18.41■□□□□ 0.54
SKA3-205ENST00000465471 A0A087WZY1 265 aa18.41■□□□□ 0.54
SKA3-205ENST00000465471 C7orf72A4D263 438 aa18.41■□□□□ 0.54
SKA3-205ENST00000465471 E9PLN8 166 aa18.41■□□□□ 0.54
SKA3-205ENST00000465471 CCL21O00585 134 aa18.41■□□□□ 0.54
SKA3-205ENST00000465471 HCRTR2O43614 444 aa18.41■□□□□ 0.54
SKA3-205ENST00000465471 EIF4E2O60573 245 aaKnown RBP18.41■□□□□ 0.54
SKA3-205ENST00000465471 DNAJA2O60884 412 aa18.41■□□□□ 0.54
SKA3-205ENST00000465471 AGFG2O95081 481 aa18.41■□□□□ 0.54
SKA3-205ENST00000465471 BCHEP06276 602 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms