RNA–Protein interactions for RNA: ENST00000461127.5

TOP3A-202, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-202ENST00000461127 L3HYPDHQ96EM0 354 aa15.36■□□□□ 0.05
TOP3A-202ENST00000461127 TMEM237Q96Q45 408 aa15.36■□□□□ 0.05
TOP3A-202ENST00000461127 GATA5Q9BWX5 397 aaPredicted RBP15.36■□□□□ 0.05
TOP3A-202ENST00000461127 FOLH1BQ9HBA9 442 aa15.36■□□□□ 0.05
TOP3A-202ENST00000461127 ZBTB26Q9HCK0 441 aa15.36■□□□□ 0.05
TOP3A-202ENST00000461127 RNF11Q9Y3C5 154 aa15.36■□□□□ 0.05
TOP3A-202ENST00000461127 OR10H1Q9Y4A9 318 aa15.36■□□□□ 0.05
TOP3A-202ENST00000461127 YLPM1P49750 1951 aaKnown RBP15.36■□□□□ 0.05
TOP3A-202ENST00000461127 C17orf51A8MQB3 221 aa15.35■□□□□ 0.05
TOP3A-202ENST00000461127 TMEM114B3SHH9 223 aa15.35■□□□□ 0.05
TOP3A-202ENST00000461127 SPRY1O43609 319 aaPredicted RBP15.35■□□□□ 0.05
TOP3A-202ENST00000461127 SUPT7LO94864 414 aa15.35■□□□□ 0.05
TOP3A-202ENST00000461127 SIX3O95343 332 aaPredicted RBP15.35■□□□□ 0.05
TOP3A-202ENST00000461127 ADH6P28332 368 aa15.35■□□□□ 0.05
TOP3A-202ENST00000461127 ARL1P40616 181 aaPredicted RBP15.35■□□□□ 0.05
TOP3A-202ENST00000461127 SLC6A8P48029 635 aa15.35■□□□□ 0.05
TOP3A-202ENST00000461127 PIK3CGP48736 1102 aa15.35■□□□□ 0.05
TOP3A-202ENST00000461127 CORO7P57737 925 aa15.35■□□□□ 0.05
TOP3A-202ENST00000461127 STX5Q13190 355 aa15.35■□□□□ 0.05
TOP3A-202ENST00000461127 LTB4RQ15722 352 aa15.35■□□□□ 0.05
TOP3A-202ENST00000461127 ZNF678Q5SXM1 525 aa15.35■□□□□ 0.05
TOP3A-202ENST00000461127 AGAP6Q5VW22 663 aa15.35■□□□□ 0.05
TOP3A-202ENST00000461127 DTX2Q86UW9 622 aa15.35■□□□□ 0.05
TOP3A-202ENST00000461127 ERP27Q96DN0 273 aa15.35■□□□□ 0.05
TOP3A-202ENST00000461127 C1GALT1C1Q96EU7 318 aa15.35■□□□□ 0.05
TOP3A-202ENST00000461127 TRIM2Q9C040 744 aa15.35■□□□□ 0.05
TOP3A-202ENST00000461127 C12orf49Q9H741 205 aa15.35■□□□□ 0.05
TOP3A-202ENST00000461127 IPPKQ9H8X2 491 aa15.35■□□□□ 0.05
TOP3A-202ENST00000461127 PFDN4Q9NQP4 134 aa15.35■□□□□ 0.05
TOP3A-202ENST00000461127 CISD1Q9NZ45 108 aaKnown RBP15.35■□□□□ 0.05
TOP3A-202ENST00000461127 ABCG2Q9UNQ0 655 aa15.35■□□□□ 0.05
TOP3A-202ENST00000461127 ELOA3DA6NLF2 546 aaPredicted RBP15.34■□□□□ 0.05
TOP3A-202ENST00000461127 KLF11O14901 512 aa15.34■□□□□ 0.05
TOP3A-202ENST00000461127 NPHS1O60500 1241 aa15.34■□□□□ 0.05
TOP3A-202ENST00000461127 HSPA4LO95757 839 aa15.34■□□□□ 0.05
TOP3A-202ENST00000461127 CD8AP01732 235 aa15.34■□□□□ 0.05
TOP3A-202ENST00000461127 ZNF16P17020 682 aaPredicted RBP15.34■□□□□ 0.05
TOP3A-202ENST00000461127 HNF1AP20823 631 aa15.34■□□□□ 0.05
TOP3A-202ENST00000461127 SERPINB5P36952 375 aa15.34■□□□□ 0.05
TOP3A-202ENST00000461127 CLK3P49761 638 aaKnown RBP15.34■□□□□ 0.05
TOP3A-202ENST00000461127 BSPH1Q075Z2 132 aa15.34■□□□□ 0.05
TOP3A-202ENST00000461127 BST1Q10588 318 aa15.34■□□□□ 0.05
TOP3A-202ENST00000461127 GTF2H2Q13888 395 aa15.34■□□□□ 0.05
TOP3A-202ENST00000461127 TAB1Q15750 504 aa15.34■□□□□ 0.05
TOP3A-202ENST00000461127 CPEB4Q17RY0 729 aaKnown RBP eCLIP15.34■□□□□ 0.05
TOP3A-202ENST00000461127 ELOA3BQ3SY89 546 aa15.34■□□□□ 0.05
TOP3A-202ENST00000461127 GTF2IRD2BQ6EKJ0 949 aa15.34■□□□□ 0.05
TOP3A-202ENST00000461127 GTF2H2CQ6P1K8 395 aa15.34■□□□□ 0.05
TOP3A-202ENST00000461127 METTL2BQ6P1Q9 378 aaKnown RBP15.34■□□□□ 0.05
TOP3A-202ENST00000461127 FIGNL1Q6PIW4 674 aa15.34■□□□□ 0.05
TOP3A-202ENST00000461127 GTF2IRD2Q86UP8 949 aa15.34■□□□□ 0.05
TOP3A-202ENST00000461127 GGNQ86UU5 652 aa15.34■□□□□ 0.05
TOP3A-202ENST00000461127 SLC44A2Q8IWA5 706 aaPredicted RBP15.34■□□□□ 0.05
TOP3A-202ENST00000461127 L3MBTL4Q8NA19 623 aa15.34■□□□□ 0.05
TOP3A-202ENST00000461127 ELOA3Q8NG57 546 aa15.34■□□□□ 0.05
TOP3A-202ENST00000461127 ZNF675Q8TD23 568 aa15.34■□□□□ 0.05
TOP3A-202ENST00000461127 USB1Q9BQ65 265 aaKnown RBP15.34■□□□□ 0.05
TOP3A-202ENST00000461127 FAIM2Q9BWQ8 316 aa15.34■□□□□ 0.05
TOP3A-202ENST00000461127 MRPL1Q9BYD6 325 aaKnown RBP15.34■□□□□ 0.05
TOP3A-202ENST00000461127 CCDC134Q9H6E4 229 aa15.34■□□□□ 0.05
TOP3A-202ENST00000461127 KCNS2Q9ULS6 477 aa15.34■□□□□ 0.05
TOP3A-202ENST00000461127 B3GALT5Q9Y2C3 310 aa15.34■□□□□ 0.05
TOP3A-202ENST00000461127 CLDN9O95484 217 aa15.33■□□□□ 0.04
TOP3A-202ENST00000461127 PGRP06401 933 aa15.33■□□□□ 0.04
TOP3A-202ENST00000461127 VIMP08670 466 aaKnown RBP15.33■□□□□ 0.04
TOP3A-202ENST00000461127 RPS17P08708 135 aaKnown RBP15.33■□□□□ 0.04
TOP3A-202ENST00000461127 SLC1A6P48664 564 aa15.33■□□□□ 0.04
TOP3A-202ENST00000461127 ALDH9A1P49189 494 aa15.33■□□□□ 0.04
TOP3A-202ENST00000461127 ABCE1P61221 599 aaKnown RBP15.33■□□□□ 0.04
TOP3A-202ENST00000461127 UNC50Q53HI1 259 aa15.33■□□□□ 0.04
TOP3A-202ENST00000461127 FRMD7Q6ZUT3 714 aa15.33■□□□□ 0.04
TOP3A-202ENST00000461127 ZNF619Q8N2I2 560 aa15.33■□□□□ 0.04
TOP3A-202ENST00000461127 OR10D3Q8NH80 312 aa15.33■□□□□ 0.04
TOP3A-202ENST00000461127 PIWIL2Q8TC59 973 aaKnown RBP15.33■□□□□ 0.04
TOP3A-202ENST00000461127 ATP6V1E2Q96A05 226 aa15.33■□□□□ 0.04
TOP3A-202ENST00000461127 CNRIP1Q96F85 164 aaPredicted RBP15.33■□□□□ 0.04
TOP3A-202ENST00000461127 VSTM2LQ96N03 204 aa15.33■□□□□ 0.04
TOP3A-202ENST00000461127 TRMOQ9BU70 441 aa15.33■□□□□ 0.04
TOP3A-202ENST00000461127 C1QTNF3Q9BXJ4 246 aa15.33■□□□□ 0.04
TOP3A-202ENST00000461127 EML4Q9HC35 981 aaKnown RBP15.33■□□□□ 0.04
TOP3A-202ENST00000461127 FBXO34Q9NWN3 711 aa15.33■□□□□ 0.04
TOP3A-202ENST00000461127 PCTPQ9UKL6 214 aa15.33■□□□□ 0.04
TOP3A-202ENST00000461127 MALRD1Q5VYJ5 2156 aa15.32■□□□□ 0.04
TOP3A-202ENST00000461127 AGTR1P30556 359 aa15.32■□□□□ 0.04
TOP3A-202ENST00000461127 LSP1P33241 339 aa15.32■□□□□ 0.04
TOP3A-202ENST00000461127 CDH11P55287 796 aa15.32■□□□□ 0.04
TOP3A-202ENST00000461127 DUSP2Q05923 314 aa15.32■□□□□ 0.04
TOP3A-202ENST00000461127 SQLEQ14534 574 aa15.32■□□□□ 0.04
TOP3A-202ENST00000461127 ZNF628Q5EBL2 1059 aa15.32■□□□□ 0.04
TOP3A-202ENST00000461127 SFRP5Q5T4F7 317 aa15.32■□□□□ 0.04
TOP3A-202ENST00000461127 FRG2Q64ET8 278 aa15.32■□□□□ 0.04
TOP3A-202ENST00000461127 FAM166AQ6J272 317 aa15.32■□□□□ 0.04
TOP3A-202ENST00000461127 FAM180BQ6P0A1 224 aa15.32■□□□□ 0.04
TOP3A-202ENST00000461127 NPSR1Q6W5P4 371 aa15.32■□□□□ 0.04
TOP3A-202ENST00000461127 GOLGA7Q7Z5G4 137 aa15.32■□□□□ 0.04
TOP3A-202ENST00000461127 WDR75Q8IWA0 830 aaKnown RBP15.32■□□□□ 0.04
TOP3A-202ENST00000461127 METTL4Q8N3J2 472 aa15.32■□□□□ 0.04
TOP3A-202ENST00000461127 ARIH2OSQ8N7S6 290 aa15.32■□□□□ 0.04
TOP3A-202ENST00000461127 ZNF483Q8TF39 744 aaPredicted RBP15.32■□□□□ 0.04
TOP3A-202ENST00000461127 DUSP19Q8WTR2 217 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms