RNA–Protein interactions for RNA: ENST00000454240.1

SMARCC1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 3

Gene SMARCC1, Length 636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-203ENST00000454240 TAS2R10Q9NYW0 307 aa25.42■■□□□ 1.66
SMARCC1-203ENST00000454240 CORO2BQ9UQ03 480 aa25.42■■□□□ 1.66
SMARCC1-203ENST00000454240 EVPLLA8MZ36 301 aa25.41■■□□□ 1.66
SMARCC1-203ENST00000454240 NPIPA2E9PIF3 369 aa25.41■■□□□ 1.66
SMARCC1-203ENST00000454240 NPIPA3F8WFD2 350 aa25.41■■□□□ 1.66
SMARCC1-203ENST00000454240 H3BNH8 94 aa25.41■■□□□ 1.66
SMARCC1-203ENST00000454240 PRRG2O14669 202 aa25.41■■□□□ 1.66
SMARCC1-203ENST00000454240 BCKDKO14874 412 aa25.41■■□□□ 1.66
SMARCC1-203ENST00000454240 NUDT7P0C024 238 aa25.41■■□□□ 1.66
SMARCC1-203ENST00000454240 ADH7P40394 386 aa25.41■■□□□ 1.66
SMARCC1-203ENST00000454240 CYLC2Q14093 348 aaPredicted RBP25.41■■□□□ 1.66
SMARCC1-203ENST00000454240 C4orf17Q53FE4 359 aa25.41■■□□□ 1.66
SMARCC1-203ENST00000454240 NHSL2Q5HYW2 709 aa25.41■■□□□ 1.66
SMARCC1-203ENST00000454240 C1QL3Q5VWW1 255 aa25.41■■□□□ 1.66
SMARCC1-203ENST00000454240 DOLPP1Q86YN1 238 aa25.41■■□□□ 1.66
SMARCC1-203ENST00000454240 OR14L1PQ8NHC6 308 aa25.41■■□□□ 1.66
SMARCC1-203ENST00000454240 RP9Q8TA86 221 aaKnown RBP25.41■■□□□ 1.66
SMARCC1-203ENST00000454240 SARAFQ96BY9 339 aa25.41■■□□□ 1.66
SMARCC1-203ENST00000454240 C1GALT1C1Q96EU7 318 aa25.41■■□□□ 1.66
SMARCC1-203ENST00000454240 MTHFD2LQ9H903 347 aaPredicted RBP25.41■■□□□ 1.66
SMARCC1-203ENST00000454240 A4GALTQ9NPC4 353 aa25.41■■□□□ 1.66
SMARCC1-203ENST00000454240 TNFRSF10DQ9UBN6 386 aa25.41■■□□□ 1.66
SMARCC1-203ENST00000454240 DKKL1Q9UK85 242 aa25.41■■□□□ 1.66
SMARCC1-203ENST00000454240 SLC6A5Q9Y345 797 aa25.41■■□□□ 1.66
SMARCC1-203ENST00000454240 FLNCQ14315 2725 aa25.41■■□□□ 1.66
SMARCC1-203ENST00000454240 TRGV8A0A0C4DH27 118 aa25.4■■□□□ 1.66
SMARCC1-203ENST00000454240 SERINC4A6NH21 518 aa25.4■■□□□ 1.66
SMARCC1-203ENST00000454240 TPOP07202 933 aa25.4■■□□□ 1.66
SMARCC1-203ENST00000454240 RNF144AP50876 292 aaPredicted RBP25.4■■□□□ 1.66
SMARCC1-203ENST00000454240 ZNF630Q2M218 657 aaPredicted RBP25.4■■□□□ 1.66
SMARCC1-203ENST00000454240 TRMT5Q32P41 509 aaKnown RBP25.4■■□□□ 1.66
SMARCC1-203ENST00000454240 MMEL1Q495T6 779 aa25.4■■□□□ 1.66
SMARCC1-203ENST00000454240 EMC4Q5J8M3 183 aa25.4■■□□□ 1.66
SMARCC1-203ENST00000454240 REP15Q6BDI9 236 aa25.4■■□□□ 1.66
SMARCC1-203ENST00000454240 ZNF614Q8N883 585 aa25.4■■□□□ 1.66
SMARCC1-203ENST00000454240 CALML5Q9NZT1 146 aa25.4■■□□□ 1.66
SMARCC1-203ENST00000454240 SUCOQ9UBS9 1254 aaKnown RBP25.4■■□□□ 1.66
SMARCC1-203ENST00000454240 TINAGQ9UJW2 476 aa25.4■■□□□ 1.66
SMARCC1-203ENST00000454240 ADAM21Q9UKJ8 722 aa25.4■■□□□ 1.66
SMARCC1-203ENST00000454240 HEATR5AQ86XA9 2040 aa25.4■■□□□ 1.66
SMARCC1-203ENST00000454240 MED12Q93074 2177 aa25.39■■□□□ 1.66
SMARCC1-203ENST00000454240 A0A1B0GUH1 482 aa25.39■■□□□ 1.66
SMARCC1-203ENST00000454240 SHOX2O60902 331 aaPredicted RBP25.39■■□□□ 1.66
SMARCC1-203ENST00000454240 SEMA7AO75326 666 aa25.39■■□□□ 1.66
SMARCC1-203ENST00000454240 NPPAP01160 153 aa25.39■■□□□ 1.66
SMARCC1-203ENST00000454240 BCHEP06276 602 aa25.39■■□□□ 1.66
SMARCC1-203ENST00000454240 CASP6P55212 293 aa25.39■■□□□ 1.66
SMARCC1-203ENST00000454240 ZNF117Q03924 483 aa25.39■■□□□ 1.66
SMARCC1-203ENST00000454240 CRYZQ08257 329 aaKnown RBP25.39■■□□□ 1.66
SMARCC1-203ENST00000454240 FGFBP1Q14512 234 aa25.39■■□□□ 1.66
SMARCC1-203ENST00000454240 GXYLT1Q4G148 440 aa25.39■■□□□ 1.66
SMARCC1-203ENST00000454240 VASNQ6EMK4 673 aa25.39■■□□□ 1.66
SMARCC1-203ENST00000454240 CBLN3Q6UW01 205 aa25.39■■□□□ 1.66
SMARCC1-203ENST00000454240 CD163Q86VB7 1156 aa25.39■■□□□ 1.66
SMARCC1-203ENST00000454240 IFNEQ86WN2 208 aa25.39■■□□□ 1.66
SMARCC1-203ENST00000454240 B4GALNT2Q8NHY0 566 aa25.39■■□□□ 1.66
SMARCC1-203ENST00000454240 TMEM19Q96HH6 336 aa25.39■■□□□ 1.66
SMARCC1-203ENST00000454240 SH3YL1Q96HL8 342 aaPredicted RBP25.39■■□□□ 1.66
SMARCC1-203ENST00000454240 CCT8L2Q96SF2 557 aa25.39■■□□□ 1.66
SMARCC1-203ENST00000454240 QRSL1Q9H0R6 528 aaKnown RBP25.39■■□□□ 1.66
SMARCC1-203ENST00000454240 SLC5A6Q9Y289 635 aa25.39■■□□□ 1.66
SMARCC1-203ENST00000454240 ARL2BPQ9Y2Y0 163 aa25.39■■□□□ 1.66
SMARCC1-203ENST00000454240 MYO7BQ6PIF6 2116 aa25.39■■□□□ 1.65
SMARCC1-203ENST00000454240 DSPPQ9NZW4 1301 aa25.38■■□□□ 1.65
SMARCC1-203ENST00000454240 C15orf38-AP3S2A0A0A6YYH1 394 aa25.38■■□□□ 1.65
SMARCC1-203ENST00000454240 TMEM247A6NEH6 219 aa25.38■■□□□ 1.65
SMARCC1-203ENST00000454240 AGAP5A6NIR3 686 aa25.38■■□□□ 1.65
SMARCC1-203ENST00000454240 MRASO14807 208 aa25.38■■□□□ 1.65
SMARCC1-203ENST00000454240 LRRTM2O43300 516 aa25.38■■□□□ 1.65
SMARCC1-203ENST00000454240 OIP5O43482 229 aa25.38■■□□□ 1.65
SMARCC1-203ENST00000454240 HCRTR2O43614 444 aa25.38■■□□□ 1.65
SMARCC1-203ENST00000454240 GMFGO60234 142 aa25.38■■□□□ 1.65
SMARCC1-203ENST00000454240 BMP7P18075 431 aa25.38■■□□□ 1.65
SMARCC1-203ENST00000454240 HK1P19367 917 aa25.38■■□□□ 1.65
SMARCC1-203ENST00000454240 RPS4Y1P22090 263 aaKnown RBP25.38■■□□□ 1.65
SMARCC1-203ENST00000454240 CRISP3P54108 245 aa25.38■■□□□ 1.65
SMARCC1-203ENST00000454240 GFRA1P56159 465 aa25.38■■□□□ 1.65
SMARCC1-203ENST00000454240 B3GALT5-AS1P59052 145 aa25.38■■□□□ 1.65
SMARCC1-203ENST00000454240 GNA13Q14344 377 aa25.38■■□□□ 1.65
SMARCC1-203ENST00000454240 TREML1Q86YW5 311 aa25.38■■□□□ 1.65
SMARCC1-203ENST00000454240 MAL2Q969L2 176 aa25.38■■□□□ 1.65
SMARCC1-203ENST00000454240 LRRC58Q96CX6 371 aa25.38■■□□□ 1.65
SMARCC1-203ENST00000454240 TIMP4Q99727 224 aa25.38■■□□□ 1.65
SMARCC1-203ENST00000454240 KLHDC3Q9BQ90 382 aa25.38■■□□□ 1.65
SMARCC1-203ENST00000454240 PNPLA3Q9NST1 481 aa25.38■■□□□ 1.65
SMARCC1-203ENST00000454240 ERRFI1Q9UJM3 462 aaPredicted RBP25.38■■□□□ 1.65
SMARCC1-203ENST00000454240 ACAD8Q9UKU7 415 aa25.38■■□□□ 1.65
SMARCC1-203ENST00000454240 ICAM5Q9UMF0 924 aa25.38■■□□□ 1.65
SMARCC1-203ENST00000454240 CARD8Q9Y2G2 431 aa25.38■■□□□ 1.65
SMARCC1-203ENST00000454240 L3MBTL1Q9Y468 752 aa25.38■■□□□ 1.65
SMARCC1-203ENST00000454240 FXYD1O00168 92 aa25.37■■□□□ 1.65
SMARCC1-203ENST00000454240 GTPBP1O00178 669 aaKnown RBP25.37■■□□□ 1.65
SMARCC1-203ENST00000454240 ZNF264O43296 627 aa25.37■■□□□ 1.65
SMARCC1-203ENST00000454240 EIF4E2O60573 245 aaKnown RBP25.37■■□□□ 1.65
SMARCC1-203ENST00000454240 ACTL6AO96019 429 aa25.37■■□□□ 1.65
SMARCC1-203ENST00000454240 ARAFP10398 606 aa25.37■■□□□ 1.65
SMARCC1-203ENST00000454240 P2RX1P51575 399 aa25.37■■□□□ 1.65
SMARCC1-203ENST00000454240 MTPNP58546 118 aa25.37■■□□□ 1.65
SMARCC1-203ENST00000454240 SELPLGQ14242 412 aa25.37■■□□□ 1.65
SMARCC1-203ENST00000454240 CAPRIN1Q14444 709 aaKnown RBP25.37■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms