RNA–Protein interactions for RNA: ENST00000453744.6

UBE2D3-210, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 3,990 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-210ENST00000453744 GHSRQ92847 366 aa12.97□□□□□ -0.33
UBE2D3-210ENST00000453744 MS4A7Q9GZW8 240 aaPredicted RBP12.97□□□□□ -0.33
UBE2D3-210ENST00000453744 OR52D1Q9H346 318 aa12.97□□□□□ -0.33
UBE2D3-210ENST00000453744 A0A1B0GVI7 797 aa12.96□□□□□ -0.33
UBE2D3-210ENST00000453744 A0A1B0GW55 424 aa12.96□□□□□ -0.33
UBE2D3-210ENST00000453744 SLC5A10A0PJK1 596 aa12.96□□□□□ -0.33
UBE2D3-210ENST00000453744 TRABD2BA6NFA1 517 aa12.96□□□□□ -0.33
UBE2D3-210ENST00000453744 DUX4L2P0CJ85 424 aa12.96□□□□□ -0.33
UBE2D3-210ENST00000453744 DUX4L3P0CJ86 424 aa12.96□□□□□ -0.33
UBE2D3-210ENST00000453744 DUX4L4P0CJ87 422 aa12.96□□□□□ -0.33
UBE2D3-210ENST00000453744 DUX4L5P0CJ88 424 aa12.96□□□□□ -0.33
UBE2D3-210ENST00000453744 DUX4L6P0CJ89 424 aa12.96□□□□□ -0.33
UBE2D3-210ENST00000453744 DUX4L7P0CJ90 424 aa12.96□□□□□ -0.33
UBE2D3-210ENST00000453744 PTHLHP12272 177 aa12.96□□□□□ -0.33
UBE2D3-210ENST00000453744 MAP2K6P52564 334 aa12.96□□□□□ -0.33
UBE2D3-210ENST00000453744 E2F1Q01094 437 aa12.96□□□□□ -0.33
UBE2D3-210ENST00000453744 ST3GAL2Q16842 350 aa12.96□□□□□ -0.33
UBE2D3-210ENST00000453744 ELP2Q6IA86 826 aa12.96□□□□□ -0.33
UBE2D3-210ENST00000453744 MS4A15Q8N5U1 240 aa12.96□□□□□ -0.33
UBE2D3-210ENST00000453744 SIRT6Q8N6T7 355 aa12.96□□□□□ -0.33
UBE2D3-210ENST00000453744 ABHD4Q8TB40 342 aa12.96□□□□□ -0.33
UBE2D3-210ENST00000453744 SGTBQ96EQ0 304 aa12.96□□□□□ -0.33
UBE2D3-210ENST00000453744 ORAI3Q9BRQ5 295 aa12.96□□□□□ -0.33
UBE2D3-210ENST00000453744 TMEM175Q9BSA9 504 aa12.96□□□□□ -0.33
UBE2D3-210ENST00000453744 PDCD10Q9BUL8 212 aa12.96□□□□□ -0.33
UBE2D3-210ENST00000453744 DUX4Q9UBX2 424 aa12.96□□□□□ -0.33
UBE2D3-210ENST00000453744 SCP2D1Q9UJQ7 156 aa12.96□□□□□ -0.33
UBE2D3-210ENST00000453744 KCNK6Q9Y257 313 aa12.96□□□□□ -0.33
UBE2D3-210ENST00000453744 KCNE3Q9Y6H6 103 aa12.96□□□□□ -0.33
UBE2D3-210ENST00000453744 FAM171A2A8MVW0 826 aa12.96□□□□□ -0.33
UBE2D3-210ENST00000453744 RASGRP1O95267 797 aa12.96□□□□□ -0.33
UBE2D3-210ENST00000453744 TPOP07202 933 aa12.96□□□□□ -0.33
UBE2D3-210ENST00000453744 SLC6A1P30531 599 aa12.96□□□□□ -0.33
UBE2D3-210ENST00000453744 EEF1A2Q05639 463 aaKnown RBP12.96□□□□□ -0.33
UBE2D3-210ENST00000453744 C4orf46Q504U0 113 aa12.96□□□□□ -0.33
UBE2D3-210ENST00000453744 TPGS2Q68CL5 300 aa12.96□□□□□ -0.33
UBE2D3-210ENST00000453744 OR8S1Q8NH09 359 aa12.96□□□□□ -0.33
UBE2D3-210ENST00000453744 IKZF2Q9UKS7 526 aa12.96□□□□□ -0.33
UBE2D3-210ENST00000453744 TRAV27A0A087WT01 109 aa12.96□□□□□ -0.33
UBE2D3-210ENST00000453744 TRBV2A0A0J9YWF9 115 aa12.96□□□□□ -0.33
UBE2D3-210ENST00000453744 CFDP00746 253 aaPredicted RBP12.96□□□□□ -0.33
UBE2D3-210ENST00000453744 CSN2P05814 226 aa12.96□□□□□ -0.33
UBE2D3-210ENST00000453744 GMFBP60983 142 aa12.96□□□□□ -0.33
UBE2D3-210ENST00000453744 C17orf99Q6UX52 265 aa12.96□□□□□ -0.33
UBE2D3-210ENST00000453744 GAREM2Q75VX8 874 aa12.96□□□□□ -0.33
UBE2D3-210ENST00000453744 GJD3Q8N144 294 aa12.96□□□□□ -0.33
UBE2D3-210ENST00000453744 OR4Q3Q8NH05 313 aa12.96□□□□□ -0.33
UBE2D3-210ENST00000453744 WDR26Q9H7D7 661 aa12.96□□□□□ -0.33
UBE2D3-210ENST00000453744 MED11Q9P086 117 aa12.96□□□□□ -0.33
UBE2D3-210ENST00000453744 KCND3Q9UK17 655 aa12.96□□□□□ -0.33
UBE2D3-210ENST00000453744 CACNA1IQ9P0X4 2223 aa12.96□□□□□ -0.34
UBE2D3-210ENST00000453744 MEIS3P1A6NDR6 274 aa12.96□□□□□ -0.34
UBE2D3-210ENST00000453744 ARRDC5A6NEK1 342 aa12.96□□□□□ -0.34
UBE2D3-210ENST00000453744 SGK494L7N484 410 aa12.96□□□□□ -0.34
UBE2D3-210ENST00000453744 RBMS1P29558 406 aaKnown RBP12.96□□□□□ -0.34
UBE2D3-210ENST00000453744 FGF9P31371 208 aaPredicted RBP12.96□□□□□ -0.34
UBE2D3-210ENST00000453744 MMP12P39900 470 aa12.96□□□□□ -0.34
UBE2D3-210ENST00000453744 ADH7P40394 386 aa12.96□□□□□ -0.34
UBE2D3-210ENST00000453744 LIMS1P48059 325 aa12.96□□□□□ -0.34
UBE2D3-210ENST00000453744 GBX2P52951 348 aaPredicted RBP12.96□□□□□ -0.34
UBE2D3-210ENST00000453744 UBE2MP61081 183 aaKnown RBP12.96□□□□□ -0.34
UBE2D3-210ENST00000453744 BTN3A2P78410 334 aa12.96□□□□□ -0.34
UBE2D3-210ENST00000453744 ZNF805Q5CZA5 627 aa12.96□□□□□ -0.34
UBE2D3-210ENST00000453744 CD276Q5ZPR3 534 aa12.96□□□□□ -0.34
UBE2D3-210ENST00000453744 C1orf94Q6P1W5 598 aa12.96□□□□□ -0.34
UBE2D3-210ENST00000453744 APOOLQ6UXV4 268 aa12.96□□□□□ -0.34
UBE2D3-210ENST00000453744 TMED4Q7Z7H5 227 aa12.96□□□□□ -0.34
UBE2D3-210ENST00000453744 DCUN1D3Q8IWE4 304 aa12.96□□□□□ -0.34
UBE2D3-210ENST00000453744 LYSMD1Q96S90 227 aa12.96□□□□□ -0.34
UBE2D3-210ENST00000453744 SLITRK2Q9H156 845 aa12.96□□□□□ -0.34
UBE2D3-210ENST00000453744 ZNF860A6NHJ4 632 aa12.95□□□□□ -0.34
UBE2D3-210ENST00000453744 UNC119BA6NIH7 251 aa12.95□□□□□ -0.34
UBE2D3-210ENST00000453744 FCMRO60667 390 aa12.95□□□□□ -0.34
UBE2D3-210ENST00000453744 RP2O75695 350 aa12.95□□□□□ -0.34
UBE2D3-210ENST00000453744 ARL6IP5O75915 188 aa12.95□□□□□ -0.34
UBE2D3-210ENST00000453744 C18orf63Q68DL7 685 aa12.95□□□□□ -0.34
UBE2D3-210ENST00000453744 OR4C11Q6IEV9 310 aa12.95□□□□□ -0.34
UBE2D3-210ENST00000453744 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.95□□□□□ -0.342e-6■■■■□ 20.8
UBE2D3-210ENST00000453744 UBE2Q1Q7Z7E8 422 aa12.95□□□□□ -0.34
UBE2D3-210ENST00000453744 RANBP3LQ86VV4 465 aaPredicted RBP12.95□□□□□ -0.34
UBE2D3-210ENST00000453744 IFNL1Q8IU54 200 aa12.95□□□□□ -0.34
UBE2D3-210ENST00000453744 OR4K13Q8NH42 304 aa12.95□□□□□ -0.34
UBE2D3-210ENST00000453744 ACOT11Q8WXI4 607 aaPredicted RBP12.95□□□□□ -0.34
UBE2D3-210ENST00000453744 ADAMTS14Q8WXS8 1223 aa12.95□□□□□ -0.34
UBE2D3-210ENST00000453744 FGF20Q9NP95 211 aaPredicted RBP12.95□□□□□ -0.34
UBE2D3-210ENST00000453744 SDHAF2Q9NX18 166 aa12.95□□□□□ -0.34
UBE2D3-210ENST00000453744 AKAP7Q9P0M2 348 aaPredicted RBP12.95□□□□□ -0.34
UBE2D3-210ENST00000453744 RPS6KB2Q9UBS0 482 aa12.95□□□□□ -0.34
UBE2D3-210ENST00000453744 IGLV3-16A0A075B6K0 115 aa12.95□□□□□ -0.34
UBE2D3-210ENST00000453744 LRRC72A6NJI9 287 aa12.95□□□□□ -0.34
UBE2D3-210ENST00000453744 CCR4P51679 360 aa12.95□□□□□ -0.34
UBE2D3-210ENST00000453744 LTB4RQ15722 352 aa12.95□□□□□ -0.34
UBE2D3-210ENST00000453744 LGALSLQ3ZCW2 172 aaPredicted RBP12.95□□□□□ -0.34
UBE2D3-210ENST00000453744 HSD17B12Q53GQ0 312 aa12.95□□□□□ -0.34
UBE2D3-210ENST00000453744 C17orf107Q6ZR85 190 aa12.95□□□□□ -0.34
UBE2D3-210ENST00000453744 GID4Q8IVV7 300 aa12.95□□□□□ -0.34
UBE2D3-210ENST00000453744 LGALS14Q8TCE9 139 aa12.95□□□□□ -0.34
UBE2D3-210ENST00000453744 DNAJA3Q96EY1 480 aa12.95□□□□□ -0.34
UBE2D3-210ENST00000453744 FCRL1Q96LA6 429 aa12.95□□□□□ -0.34
UBE2D3-210ENST00000453744 UBQLN3Q9H347 655 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms