RNA–Protein interactions for RNA: ENST00000445369.2

CLDN9-201, Transcript of claudin 9, humanhuman

APPRIS P1 BASIC

Gene CLDN9, Length 2,050 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN9-201ENST00000445369 PSD4Q8NDX1 1056 aa16.55■□□□□ 0.24
CLDN9-201ENST00000445369 OR52N1Q8NH53 320 aa16.55■□□□□ 0.24
CLDN9-201ENST00000445369 PFN4Q8NHR9 129 aa16.55■□□□□ 0.24
CLDN9-201ENST00000445369 FANK1Q8TC84 345 aa16.55■□□□□ 0.24
CLDN9-201ENST00000445369 SLC37A2Q8TED4 501 aa16.55■□□□□ 0.24
CLDN9-201ENST00000445369 TMEM239Q8WW34 195 aa16.55■□□□□ 0.24
CLDN9-201ENST00000445369 CTHRC1Q96CG8 243 aa16.55■□□□□ 0.24
CLDN9-201ENST00000445369 GSDMCQ9BYG8 508 aa16.55■□□□□ 0.24
CLDN9-201ENST00000445369 TRPV5Q9NQA5 729 aa16.55■□□□□ 0.24
CLDN9-201ENST00000445369 SIDT1Q9NXL6 827 aaKnown RBP16.55■□□□□ 0.24
CLDN9-201ENST00000445369 GSTK1Q9Y2Q3 226 aa16.55■□□□□ 0.24
CLDN9-201ENST00000445369 TMEM221A6NGB7 291 aa16.54■□□□□ 0.24
CLDN9-201ENST00000445369 J3QRE1 110 aa16.54■□□□□ 0.24
CLDN9-201ENST00000445369 BRINP1O60477 761 aa16.54■□□□□ 0.24
CLDN9-201ENST00000445369 CELA2BP08218 269 aaPredicted RBP16.54■□□□□ 0.24
CLDN9-201ENST00000445369 MAKP20794 623 aa16.54■□□□□ 0.24
CLDN9-201ENST00000445369 PPP1CAP62136 330 aa16.54■□□□□ 0.24
CLDN9-201ENST00000445369 BAK1Q16611 211 aa16.54■□□□□ 0.24
CLDN9-201ENST00000445369 FIGNL1Q6PIW4 674 aa16.54■□□□□ 0.24
CLDN9-201ENST00000445369 CXXC5Q7LFL8 322 aaKnown RBP16.54■□□□□ 0.24
CLDN9-201ENST00000445369 AKAP14Q86UN6 197 aa16.54■□□□□ 0.24
CLDN9-201ENST00000445369 CPOQ8IVL8 374 aa16.54■□□□□ 0.24
CLDN9-201ENST00000445369 ARIH2OSQ8N7S6 290 aa16.54■□□□□ 0.24
CLDN9-201ENST00000445369 ANKRD9Q96BM1 317 aaPredicted RBP16.54■□□□□ 0.24
CLDN9-201ENST00000445369 C8orf33Q9H7E9 229 aaPredicted RBP16.54■□□□□ 0.24
CLDN9-201ENST00000445369 C20orf141Q9NUB4 165 aa16.54■□□□□ 0.24
CLDN9-201ENST00000445369 KIR2DS5A0A0G2JLQ3 304 aa16.54■□□□□ 0.24
CLDN9-201ENST00000445369 A0A0G2JNG1 304 aa16.54■□□□□ 0.24
CLDN9-201ENST00000445369 KIR2DS3K7RE56 304 aa16.54■□□□□ 0.24
CLDN9-201ENST00000445369 BHLHE40O14503 412 aa16.54■□□□□ 0.24
CLDN9-201ENST00000445369 AKAP8O43823 692 aaKnown RBP16.54■□□□□ 0.24
CLDN9-201ENST00000445369 IGHV4-34P06331 123 aa16.54■□□□□ 0.24
CLDN9-201ENST00000445369 TBXA2RP21731 343 aa16.54■□□□□ 0.24
CLDN9-201ENST00000445369 KIR2DS5Q14953 304 aa16.54■□□□□ 0.24
CLDN9-201ENST00000445369 CARTPTQ16568 116 aa16.54■□□□□ 0.24
CLDN9-201ENST00000445369 ZNF791Q3KP31 576 aaPredicted RBP16.54■□□□□ 0.24
CLDN9-201ENST00000445369 SPATC1Q76KD6 591 aa16.54■□□□□ 0.24
CLDN9-201ENST00000445369 GID4Q8IVV7 300 aa16.54■□□□□ 0.24
CLDN9-201ENST00000445369 SIRT6Q8N6T7 355 aa16.54■□□□□ 0.24
CLDN9-201ENST00000445369 IL17RDQ8NFM7 739 aa16.54■□□□□ 0.24
CLDN9-201ENST00000445369 HOXB13Q92826 284 aaPredicted RBP16.54■□□□□ 0.24
CLDN9-201ENST00000445369 PMM1Q92871 262 aa16.54■□□□□ 0.24
CLDN9-201ENST00000445369 ITFG2Q969R8 447 aa16.54■□□□□ 0.24
CLDN9-201ENST00000445369 SECISBP2Q96T21 854 aaKnown RBP16.54■□□□□ 0.24
CLDN9-201ENST00000445369 CD180Q99467 661 aa16.54■□□□□ 0.24
CLDN9-201ENST00000445369 FN3KQ9H479 309 aa16.54■□□□□ 0.24
CLDN9-201ENST00000445369 ATP13A2Q9NQ11 1180 aa16.54■□□□□ 0.24
CLDN9-201ENST00000445369 MMP17Q9ULZ9 603 aa16.54■□□□□ 0.24
CLDN9-201ENST00000445369 A0A1W2PQL4 384 aaPredicted RBP16.53■□□□□ 0.24
CLDN9-201ENST00000445369 GXYLT2A0PJZ3 443 aa16.53■□□□□ 0.24
CLDN9-201ENST00000445369 FAM183AA6NL82 134 aa16.53■□□□□ 0.24
CLDN9-201ENST00000445369 PRAMEF26H0Y7S4 382 aa16.53■□□□□ 0.24
CLDN9-201ENST00000445369 CHST10O43529 356 aa16.53■□□□□ 0.24
CLDN9-201ENST00000445369 HCRTR1O43613 425 aa16.53■□□□□ 0.24
CLDN9-201ENST00000445369 GAAP10253 952 aa16.53■□□□□ 0.24
CLDN9-201ENST00000445369 IL7P13232 177 aa16.53■□□□□ 0.24
CLDN9-201ENST00000445369 IFI30P13284 250 aa16.53■□□□□ 0.24
CLDN9-201ENST00000445369 FUT1P19526 365 aa16.53■□□□□ 0.24
CLDN9-201ENST00000445369 AZGP1P25311 298 aaKnown RBP16.53■□□□□ 0.24
CLDN9-201ENST00000445369 CASP3P42574 277 aa16.53■□□□□ 0.24
CLDN9-201ENST00000445369 TMED10P49755 219 aaKnown RBP16.53■□□□□ 0.24
CLDN9-201ENST00000445369 RNF144AP50876 292 aaPredicted RBP16.53■□□□□ 0.24
CLDN9-201ENST00000445369 RAB38P57729 211 aa16.53■□□□□ 0.24
CLDN9-201ENST00000445369 VSX2P58304 361 aaPredicted RBP16.53■□□□□ 0.24
CLDN9-201ENST00000445369 POU6F2P78424 691 aaPredicted RBP16.53■□□□□ 0.24
CLDN9-201ENST00000445369 EIF2B5Q13144 721 aaKnown RBP16.53■□□□□ 0.24
CLDN9-201ENST00000445369 FZD5Q13467 585 aa16.53■□□□□ 0.24
CLDN9-201ENST00000445369 NIPAL3Q6P499 406 aa16.53■□□□□ 0.24
CLDN9-201ENST00000445369 OR52L1Q8NGH7 329 aa16.53■□□□□ 0.24
CLDN9-201ENST00000445369 SPRYD4Q8WW59 207 aaPredicted RBP16.53■□□□□ 0.24
CLDN9-201ENST00000445369 HS6ST2Q96MM7 605 aa16.53■□□□□ 0.24
CLDN9-201ENST00000445369 COQ7Q99807 217 aa16.53■□□□□ 0.24
CLDN9-201ENST00000445369 POLE3Q9NRF9 147 aa16.53■□□□□ 0.24
CLDN9-201ENST00000445369 CLDND1Q9NY35 253 aa16.53■□□□□ 0.24
CLDN9-201ENST00000445369 H2AFY2Q9P0M6 372 aaPredicted RBP16.53■□□□□ 0.24
CLDN9-201ENST00000445369 USP36Q9P275 1121 aaKnown RBP16.53■□□□□ 0.24
CLDN9-201ENST00000445369 TNFRSF10DQ9UBN6 386 aa16.53■□□□□ 0.24
CLDN9-201ENST00000445369 CD207Q9UJ71 328 aa16.53■□□□□ 0.24
CLDN9-201ENST00000445369 PCDHGB2Q9Y5G2 931 aa16.53■□□□□ 0.24
CLDN9-201ENST00000445369 SZT2Q5T011 3432 aa16.53■□□□□ 0.24
CLDN9-201ENST00000445369 OR5K4A6NMS3 321 aa16.52■□□□□ 0.24
CLDN9-201ENST00000445369 SGK494L7N484 410 aa16.52■□□□□ 0.24
CLDN9-201ENST00000445369 NKX2-2O95096 273 aa16.52■□□□□ 0.24
CLDN9-201ENST00000445369 CBX7O95931 251 aa16.52■□□□□ 0.24
CLDN9-201ENST00000445369 GABRA3P34903 492 aa16.52■□□□□ 0.24
CLDN9-201ENST00000445369 DDI2Q5TDH0 399 aa16.52■□□□□ 0.24
CLDN9-201ENST00000445369 VASNQ6EMK4 673 aa16.52■□□□□ 0.24
CLDN9-201ENST00000445369 ZNF322Q6U7Q0 402 aaPredicted RBP16.52■□□□□ 0.24
CLDN9-201ENST00000445369 ZAR1Q86SH2 424 aa16.52■□□□□ 0.24
CLDN9-201ENST00000445369 HMGB4Q8WW32 186 aa16.52■□□□□ 0.24
CLDN9-201ENST00000445369 AP3S1Q92572 193 aa16.52■□□□□ 0.24
CLDN9-201ENST00000445369 DCLRE1CQ96SD1 692 aaKnown RBP16.52■□□□□ 0.24
CLDN9-201ENST00000445369 STARD5Q9NSY2 213 aa16.52■□□□□ 0.24
CLDN9-201ENST00000445369 OR5K3A6NET4 321 aa16.52■□□□□ 0.23
CLDN9-201ENST00000445369 LTBRP36941 435 aa16.52■□□□□ 0.23
CLDN9-201ENST00000445369 LRIT3Q3SXY7 679 aa16.52■□□□□ 0.23
CLDN9-201ENST00000445369 ZNF542PQ5EBM4 170 aa16.52■□□□□ 0.23
CLDN9-201ENST00000445369 GARNL3Q5VVW2 1013 aa16.52■□□□□ 0.23
CLDN9-201ENST00000445369 PLBD1Q6P4A8 553 aa16.52■□□□□ 0.23
CLDN9-201ENST00000445369 FAM131AQ6UXB0 335 aa16.52■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms