RNA–Protein interactions for RNA: ENST00000443638.1

TM9SF3-202, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 3

Gene TM9SF3, Length 868 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-202ENST00000443638 GPX8Q8TED1 209 aa4.46□□□□□ -1.7
TM9SF3-202ENST00000443638 SCARB1Q8WTV0 552 aa4.46□□□□□ -1.7
TM9SF3-202ENST00000443638 MITD1Q8WV92 249 aa4.46□□□□□ -1.7
TM9SF3-202ENST00000443638 SECTM1Q8WVN6 248 aa4.46□□□□□ -1.7
TM9SF3-202ENST00000443638 RPL36ALQ969Q0 106 aaKnown RBP4.46□□□□□ -1.7
TM9SF3-202ENST00000443638 C11orf52Q96A22 123 aa4.46□□□□□ -1.7
TM9SF3-202ENST00000443638 KIAA1143Q96AT1 154 aaPredicted RBP4.46□□□□□ -1.7
TM9SF3-202ENST00000443638 SGK3Q96BR1 496 aa4.46□□□□□ -1.7
TM9SF3-202ENST00000443638 BIRC7Q96CA5 298 aa4.46□□□□□ -1.7
TM9SF3-202ENST00000443638 IL4I1Q96RQ9 567 aa4.46□□□□□ -1.7
TM9SF3-202ENST00000443638 NIPSNAP3BQ9BS92 247 aa4.46□□□□□ -1.7
TM9SF3-202ENST00000443638 RBM4Q9BWF3 364 aaKnown RBP4.46□□□□□ -1.7
TM9SF3-202ENST00000443638 ILKAPQ9H0C8 392 aaPredicted RBP4.46□□□□□ -1.7
TM9SF3-202ENST00000443638 DDX31Q9H8H2 851 aaKnown RBP4.46□□□□□ -1.7
TM9SF3-202ENST00000443638 MTHFD2LQ9H903 347 aaPredicted RBP4.46□□□□□ -1.7
TM9SF3-202ENST00000443638 ICAM5Q9UMF0 924 aa4.46□□□□□ -1.7
TM9SF3-202ENST00000443638 PRPF19Q9UMS4 504 aaKnown RBP4.46□□□□□ -1.7
TM9SF3-202ENST00000443638 SLC9A8Q9Y2E8 581 aa4.46□□□□□ -1.7
TM9SF3-202ENST00000443638 STK38LQ9Y2H1 464 aa4.46□□□□□ -1.7
TM9SF3-202ENST00000443638 AK6Q9Y3D8 172 aaKnown RBP4.46□□□□□ -1.7
TM9SF3-202ENST00000443638 GMPPBQ9Y5P6 360 aa4.46□□□□□ -1.7
TM9SF3-202ENST00000443638 PEX16Q9Y5Y5 336 aa4.46□□□□□ -1.7
TM9SF3-202ENST00000443638 A0A0J9YYE9 177 aa4.45□□□□□ -1.7
TM9SF3-202ENST00000443638 ZNF879B4DU55 563 aa4.45□□□□□ -1.7
TM9SF3-202ENST00000443638 NVLO15381 856 aaKnown RBP4.45□□□□□ -1.7
TM9SF3-202ENST00000443638 DUSP11O75319 330 aaKnown RBP4.45□□□□□ -1.7
TM9SF3-202ENST00000443638 TRBC1P01850 177 aa4.45□□□□□ -1.7
TM9SF3-202ENST00000443638 CRYABP02511 175 aaKnown RBP4.45□□□□□ -1.7
TM9SF3-202ENST00000443638 CT62P0C5K7 136 aa4.45□□□□□ -1.7
TM9SF3-202ENST00000443638 MSR1P21757 451 aa4.45□□□□□ -1.7
TM9SF3-202ENST00000443638 ANXA13P27216 316 aa4.45□□□□□ -1.7
TM9SF3-202ENST00000443638 RPL13AP40429 203 aaKnown RBP4.45□□□□□ -1.7
TM9SF3-202ENST00000443638 SSR1P43307 286 aaKnown RBP4.45□□□□□ -1.7
TM9SF3-202ENST00000443638 POU3F4P49335 361 aa4.45□□□□□ -1.7
TM9SF3-202ENST00000443638 NDST2P52849 883 aa4.45□□□□□ -1.7
TM9SF3-202ENST00000443638 RPS27AP62979 156 aaKnown RBP4.45□□□□□ -1.7
TM9SF3-202ENST00000443638 IRF8Q02556 426 aa4.45□□□□□ -1.7
TM9SF3-202ENST00000443638 RGS1Q08116 209 aa4.45□□□□□ -1.7
TM9SF3-202ENST00000443638 RIPPLY1Q0D2K3 151 aa4.45□□□□□ -1.7
TM9SF3-202ENST00000443638 RAB40BQ12829 278 aa4.45□□□□□ -1.7
TM9SF3-202ENST00000443638 EIF2B1Q14232 305 aaKnown RBP4.45□□□□□ -1.7
TM9SF3-202ENST00000443638 TGFBIQ15582 683 aa4.45□□□□□ -1.7
TM9SF3-202ENST00000443638 TIGITQ495A1 244 aa4.45□□□□□ -1.7
TM9SF3-202ENST00000443638 PRR5LQ6MZQ0 368 aa4.45□□□□□ -1.7
TM9SF3-202ENST00000443638 RBMS3Q6XE24 437 aaKnown RBP4.45□□□□□ -1.7
TM9SF3-202ENST00000443638 FBXL16Q8N461 479 aa4.45□□□□□ -1.7
TM9SF3-202ENST00000443638 MAGEE2Q8TD90 523 aaPredicted RBP4.45□□□□□ -1.7
TM9SF3-202ENST00000443638 ACMSDQ8TDX5 336 aa4.45□□□□□ -1.7
TM9SF3-202ENST00000443638 ARNTL2Q8WYA1 636 aa4.45□□□□□ -1.7
TM9SF3-202ENST00000443638 HMCESQ96FZ2 354 aa4.45□□□□□ -1.7
TM9SF3-202ENST00000443638 C20orf24Q9BUV8 137 aa4.45□□□□□ -1.7
TM9SF3-202ENST00000443638 SPATA16Q9BXB7 569 aa4.45□□□□□ -1.7
TM9SF3-202ENST00000443638 HOXD1Q9GZZ0 328 aa4.45□□□□□ -1.7
TM9SF3-202ENST00000443638 TMPRSS5Q9H3S3 457 aa4.45□□□□□ -1.7
TM9SF3-202ENST00000443638 GLIPR2Q9H4G4 154 aa4.45□□□□□ -1.7
TM9SF3-202ENST00000443638 AGPAT3Q9NRZ7 376 aa4.45□□□□□ -1.7
TM9SF3-202ENST00000443638 ZNHIT6Q9NWK9 470 aaKnown RBP4.45□□□□□ -1.7
TM9SF3-202ENST00000443638 ZKSCAN7Q9P0L1 754 aaPredicted RBP4.45□□□□□ -1.7
TM9SF3-202ENST00000443638 IKZF2Q9UKS7 526 aa4.45□□□□□ -1.7
TM9SF3-202ENST00000443638 SCML2Q9UQR0 700 aa4.45□□□□□ -1.7
TM9SF3-202ENST00000443638 MYRFQ9Y2G1 1151 aa4.45□□□□□ -1.7
TM9SF3-202ENST00000443638 STARD10Q9Y365 291 aa4.45□□□□□ -1.7
TM9SF3-202ENST00000443638 RHBDD3Q9Y3P4 386 aa4.45□□□□□ -1.7
TM9SF3-202ENST00000443638 IGHV3-20A0A0C4DH32 117 aa4.44□□□□□ -1.7
TM9SF3-202ENST00000443638 TRBV5-4A0A0C4DH59 114 aa4.44□□□□□ -1.7
TM9SF3-202ENST00000443638 NEDD8-MDP1E9PL57 170 aa4.44□□□□□ -1.7
TM9SF3-202ENST00000443638 F5H6K3 240 aa4.44□□□□□ -1.7
TM9SF3-202ENST00000443638 C16orf97H3BN30 126 aa4.44□□□□□ -1.7
TM9SF3-202ENST00000443638 P2RY10O00398 339 aa4.44□□□□□ -1.7
TM9SF3-202ENST00000443638 ZNF195O14628 629 aa4.44□□□□□ -1.7
TM9SF3-202ENST00000443638 FRAT2O75474 233 aaPredicted RBP4.44□□□□□ -1.7
TM9SF3-202ENST00000443638 CDC123O75794 336 aaPredicted RBP4.44□□□□□ -1.7
TM9SF3-202ENST00000443638 ZBTB11O95625 1053 aaPredicted RBP4.44□□□□□ -1.7
TM9SF3-202ENST00000443638 CLPTM1O96005 669 aa4.44□□□□□ -1.7
TM9SF3-202ENST00000443638 ERCC1P07992 297 aaPredicted RBP4.44□□□□□ -1.7
TM9SF3-202ENST00000443638 PLEKP08567 350 aaPredicted RBP4.44□□□□□ -1.7
TM9SF3-202ENST00000443638 ZNF43P17038 809 aa4.44□□□□□ -1.7
TM9SF3-202ENST00000443638 KITLGP21583 273 aa4.44□□□□□ -1.7
TM9SF3-202ENST00000443638 PRKACBP22694 351 aa4.44□□□□□ -1.7
TM9SF3-202ENST00000443638 MARK3P27448 753 aa4.44□□□□□ -1.7
TM9SF3-202ENST00000443638 ACVRL1P37023 503 aa4.44□□□□□ -1.7
TM9SF3-202ENST00000443638 ANP32AP39687 249 aaKnown RBP4.44□□□□□ -1.7
TM9SF3-202ENST00000443638 NR4A2P43354 598 aa4.44□□□□□ -1.7
TM9SF3-202ENST00000443638 GYG1P46976 350 aa4.44□□□□□ -1.7
TM9SF3-202ENST00000443638 HLCSP50747 726 aa4.44□□□□□ -1.7
TM9SF3-202ENST00000443638 PAX5Q02548 391 aa4.44□□□□□ -1.7
TM9SF3-202ENST00000443638 KLRC3Q07444 240 aa4.44□□□□□ -1.7
TM9SF3-202ENST00000443638 VGLL4Q14135 290 aa4.44□□□□□ -1.7
TM9SF3-202ENST00000443638 GCKRQ14397 625 aa4.44□□□□□ -1.7
TM9SF3-202ENST00000443638 ITIH4Q14624 930 aa4.44□□□□□ -1.7
TM9SF3-202ENST00000443638 RAB35Q15286 201 aa4.44□□□□□ -1.7
TM9SF3-202ENST00000443638 ZNF77Q15935 545 aa4.44□□□□□ -1.7
TM9SF3-202ENST00000443638 FAHD2BQ6P2I3 314 aaPredicted RBP4.44□□□□□ -1.7
TM9SF3-202ENST00000443638 SSX9Q7RTT3 188 aa4.44□□□□□ -1.7
TM9SF3-202ENST00000443638 C16orf82Q7Z2V1 217 aa4.44□□□□□ -1.7
TM9SF3-202ENST00000443638 TSEN54Q7Z6J9 526 aaKnown RBP4.44□□□□□ -1.7
TM9SF3-202ENST00000443638 TRPT1Q86TN4 253 aaKnown RBP4.44□□□□□ -1.7
TM9SF3-202ENST00000443638 LINC00523Q86TU6 105 aa4.44□□□□□ -1.7
TM9SF3-202ENST00000443638 CATSPERDQ86XM0 798 aa4.44□□□□□ -1.7
TM9SF3-202ENST00000443638 MFSD6LQ8IWD5 586 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms