RNA–Protein interactions for RNA: ENST00000438647.3

RAPGEF1-206, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene RAPGEF1, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-206ENST00000438647 TM9SF2Q99805 663 aa22.37■■□□□ 1.17
RAPGEF1-206ENST00000438647 SERHL2Q9H4I8 314 aa22.37■■□□□ 1.17
RAPGEF1-206ENST00000438647 ZIM2Q9NZV7 527 aa22.37■■□□□ 1.17
RAPGEF1-206ENST00000438647 ITPR2Q14571 2701 aa22.37■■□□□ 1.17
RAPGEF1-206ENST00000438647 OR2M5A3KFT3 312 aa22.36■■□□□ 1.17
RAPGEF1-206ENST00000438647 CLCA1A8K7I4 914 aa22.36■■□□□ 1.17
RAPGEF1-206ENST00000438647 GMFGO60234 142 aa22.36■■□□□ 1.17
RAPGEF1-206ENST00000438647 ZNF17P17021 662 aa22.36■■□□□ 1.17
RAPGEF1-206ENST00000438647 BMP5P22003 454 aa22.36■■□□□ 1.17
RAPGEF1-206ENST00000438647 IL12AP29459 219 aa22.36■■□□□ 1.17
RAPGEF1-206ENST00000438647 ZNF41P51814 821 aaPredicted RBP22.36■■□□□ 1.17
RAPGEF1-206ENST00000438647 DGKQP52824 942 aa22.36■■□□□ 1.17
RAPGEF1-206ENST00000438647 SAXO2Q658L1 398 aa22.36■■□□□ 1.17
RAPGEF1-206ENST00000438647 EPGNQ6UW88 154 aa22.36■■□□□ 1.17
RAPGEF1-206ENST00000438647 C16orf62Q7Z3J2 963 aa22.36■■□□□ 1.17
RAPGEF1-206ENST00000438647 NAXEQ8NCW5 288 aa22.36■■□□□ 1.17
RAPGEF1-206ENST00000438647 B4GALNT2Q8NHY0 566 aa22.36■■□□□ 1.17
RAPGEF1-206ENST00000438647 PHOSPHO1Q8TCT1 267 aa22.36■■□□□ 1.17
RAPGEF1-206ENST00000438647 WNT2BQ93097 391 aa22.36■■□□□ 1.17
RAPGEF1-206ENST00000438647 ZBTB8AQ96BR9 441 aa22.36■■□□□ 1.17
RAPGEF1-206ENST00000438647 NEURL3Q96EH8 262 aa22.36■■□□□ 1.17
RAPGEF1-206ENST00000438647 SH3YL1Q96HL8 342 aaPredicted RBP22.36■■□□□ 1.17
RAPGEF1-206ENST00000438647 OR52B2Q96RD2 323 aa22.36■■□□□ 1.17
RAPGEF1-206ENST00000438647 SDF2Q99470 211 aa22.36■■□□□ 1.17
RAPGEF1-206ENST00000438647 SLC35A5Q9BS91 424 aa22.36■■□□□ 1.17
RAPGEF1-206ENST00000438647 OR51I1Q9H343 314 aa22.36■■□□□ 1.17
RAPGEF1-206ENST00000438647 ACBD3Q9H3P7 528 aa22.36■■□□□ 1.17
RAPGEF1-206ENST00000438647 SLC24A3Q9HC58 644 aa22.36■■□□□ 1.17
RAPGEF1-206ENST00000438647 NPDC1Q9NQX5 325 aaPredicted RBP22.36■■□□□ 1.17
RAPGEF1-206ENST00000438647 SDR39U1Q9NRG7 319 aaPredicted RBP22.36■■□□□ 1.17
RAPGEF1-206ENST00000438647 VDAC3Q9Y277 283 aa22.36■■□□□ 1.17
RAPGEF1-206ENST00000438647 HCRTR2O43614 444 aa22.35■■□□□ 1.17
RAPGEF1-206ENST00000438647 STX11O75558 287 aa22.35■■□□□ 1.17
RAPGEF1-206ENST00000438647 IGFBP2P18065 325 aa22.35■■□□□ 1.17
RAPGEF1-206ENST00000438647 KHKP50053 298 aa22.35■■□□□ 1.17
RAPGEF1-206ENST00000438647 ARHGAP11BQ3KRB8 267 aa22.35■■□□□ 1.17
RAPGEF1-206ENST00000438647 KLHL26Q53HC5 615 aa22.35■■□□□ 1.17
RAPGEF1-206ENST00000438647 ARSKQ6UWY0 536 aa22.35■■□□□ 1.17
RAPGEF1-206ENST00000438647 UBQLNLQ8IYU4 475 aa22.35■■□□□ 1.17
RAPGEF1-206ENST00000438647 TREX2Q9BQ50 279 aaPredicted RBP22.35■■□□□ 1.17
RAPGEF1-206ENST00000438647 NMUR2Q9GZQ4 415 aa22.35■■□□□ 1.17
RAPGEF1-206ENST00000438647 SLCO1B3Q9NPD5 702 aa22.35■■□□□ 1.17
RAPGEF1-206ENST00000438647 CLCF1Q9UBD9 225 aa22.35■■□□□ 1.17
RAPGEF1-206ENST00000438647 ZNF337Q9Y3M9 751 aa22.35■■□□□ 1.17
RAPGEF1-206ENST00000438647 AP4B1Q9Y6B7 739 aa22.35■■□□□ 1.17
RAPGEF1-206ENST00000438647 INTS1Q8N201 2190 aaKnown RBP22.34■■□□□ 1.17
RAPGEF1-206ENST00000438647 C9JVG2 144 aa22.34■■□□□ 1.17
RAPGEF1-206ENST00000438647 H3BML4 177 aa22.34■■□□□ 1.17
RAPGEF1-206ENST00000438647 POLR3GO15318 223 aaPredicted RBP22.34■■□□□ 1.17
RAPGEF1-206ENST00000438647 CTSSP25774 331 aa22.34■■□□□ 1.17
RAPGEF1-206ENST00000438647 OPRM1P35372 400 aa22.34■■□□□ 1.17
RAPGEF1-206ENST00000438647 ANXA11P50995 505 aaKnown RBP22.34■■□□□ 1.17
RAPGEF1-206ENST00000438647 ZNF136P52737 540 aa22.34■■□□□ 1.17
RAPGEF1-206ENST00000438647 TXNL4AP83876 142 aaKnown RBP22.34■■□□□ 1.17
RAPGEF1-206ENST00000438647 CD226Q15762 336 aa22.34■■□□□ 1.17
RAPGEF1-206ENST00000438647 TMEM44Q2T9K0 475 aa22.34■■□□□ 1.17
RAPGEF1-206ENST00000438647 GRAMD2AQ8IUY3 354 aa22.34■■□□□ 1.17
RAPGEF1-206ENST00000438647 MIER2Q8N344 545 aa22.34■■□□□ 1.17
RAPGEF1-206ENST00000438647 ZNF614Q8N883 585 aa22.34■■□□□ 1.17
RAPGEF1-206ENST00000438647 C9orf106Q8NAJ2 232 aa22.34■■□□□ 1.17
RAPGEF1-206ENST00000438647 OR5M1Q8NGP8 315 aa22.34■■□□□ 1.17
RAPGEF1-206ENST00000438647 MARK4Q96L34 752 aa22.34■■□□□ 1.17
RAPGEF1-206ENST00000438647 TCF7L2Q9NQB0 619 aa22.34■■□□□ 1.17
RAPGEF1-206ENST00000438647 DTNAQ9Y4J8 743 aa22.34■■□□□ 1.17
RAPGEF1-206ENST00000438647 NPIPA5A0A0B4J1W7 369 aa22.33■■□□□ 1.17
RAPGEF1-206ENST00000438647 C7orf72A4D263 438 aa22.33■■□□□ 1.17
RAPGEF1-206ENST00000438647 CCDC154A6NI56 674 aa22.33■■□□□ 1.17
RAPGEF1-206ENST00000438647 NPIPA7E9PJI5 369 aa22.33■■□□□ 1.17
RAPGEF1-206ENST00000438647 NPIPB9F8W1W9 429 aa22.33■■□□□ 1.17
RAPGEF1-206ENST00000438647 RCBTB2O95199 551 aa22.33■■□□□ 1.17
RAPGEF1-206ENST00000438647 IL18BPO95998 194 aa22.33■■□□□ 1.17
RAPGEF1-206ENST00000438647 NPIPA8P0DM63 369 aa22.33■■□□□ 1.17
RAPGEF1-206ENST00000438647 TMIGD3P0DMS9 266 aaPredicted RBP22.33■■□□□ 1.17
RAPGEF1-206ENST00000438647 PRF1P14222 555 aa22.33■■□□□ 1.17
RAPGEF1-206ENST00000438647 SUMO3P55854 103 aaPredicted RBP22.33■■□□□ 1.17
RAPGEF1-206ENST00000438647 RPS3AP61247 264 aaKnown RBP22.33■■□□□ 1.17
RAPGEF1-206ENST00000438647 HEPHL1Q6MZM0 1159 aa22.33■■□□□ 1.17
RAPGEF1-206ENST00000438647 TNFAIP8L2Q6P589 184 aaPredicted RBP22.33■■□□□ 1.17
RAPGEF1-206ENST00000438647 GTPBP8Q8N3Z3 284 aaPredicted RBP22.33■■□□□ 1.17
RAPGEF1-206ENST00000438647 XAGE5Q8WWM1 108 aa22.33■■□□□ 1.17
RAPGEF1-206ENST00000438647 TRIM8Q9BZR9 551 aa22.33■■□□□ 1.17
RAPGEF1-206ENST00000438647 ZNF350Q9GZX5 532 aa22.33■■□□□ 1.17
RAPGEF1-206ENST00000438647 MED17Q9NVC6 651 aa22.33■■□□□ 1.17
RAPGEF1-206ENST00000438647 HCFC1P51610 2035 aa22.32■■□□□ 1.16
RAPGEF1-206ENST00000438647 GTPBP1O00178 669 aaKnown RBP22.32■■□□□ 1.16
RAPGEF1-206ENST00000438647 RFXANKO14593 260 aa22.32■■□□□ 1.16
RAPGEF1-206ENST00000438647 SEC14L5O43304 696 aa22.32■■□□□ 1.16
RAPGEF1-206ENST00000438647 GUSBP08236 651 aa22.32■■□□□ 1.16
RAPGEF1-206ENST00000438647 OR12D1P0DN82 309 aa22.32■■□□□ 1.16
RAPGEF1-206ENST00000438647 SSTR2P30874 369 aa22.32■■□□□ 1.16
RAPGEF1-206ENST00000438647 ASCL1P50553 236 aa22.32■■□□□ 1.16
RAPGEF1-206ENST00000438647 CASP9P55211 416 aa22.32■■□□□ 1.16
RAPGEF1-206ENST00000438647 STX1BP61266 288 aa22.32■■□□□ 1.16
RAPGEF1-206ENST00000438647 EEF1A1P68104 462 aaKnown RBP22.32■■□□□ 1.16
RAPGEF1-206ENST00000438647 ZNF117Q03924 483 aa22.32■■□□□ 1.16
RAPGEF1-206ENST00000438647 GPR68Q15743 365 aa22.32■■□□□ 1.16
RAPGEF1-206ENST00000438647 PLPPR5Q32ZL2 321 aa22.32■■□□□ 1.16
RAPGEF1-206ENST00000438647 DDX59Q5T1V6 619 aaKnown RBP eCLIP22.32■■□□□ 1.16
RAPGEF1-206ENST00000438647 EEF1A1P5Q5VTE0 462 aa22.32■■□□□ 1.16
RAPGEF1-206ENST00000438647 ZNF621Q6ZSS3 439 aa22.32■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms