RNA–Protein interactions for RNA: ENST00000429440.5

CDC42BPA-206, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 2

Gene CDC42BPA, Length 2,501 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-206ENST00000429440 ZNF626Q68DY1 528 aa8.31□□□□□ -1.08
CDC42BPA-206ENST00000429440 HBMQ6B0K9 141 aa8.31□□□□□ -1.08
CDC42BPA-206ENST00000429440 PTRHD1Q6GMV3 140 aaKnown RBP8.31□□□□□ -1.08
CDC42BPA-206ENST00000429440 CDPF1Q6NVV7 123 aa8.31□□□□□ -1.08
CDC42BPA-206ENST00000429440 B3GLCTQ6Y288 498 aa8.31□□□□□ -1.08
CDC42BPA-206ENST00000429440 OR2W3Q7Z3T1 314 aa8.31□□□□□ -1.08
CDC42BPA-206ENST00000429440 TECPR1Q7Z6L1 1165 aa8.31□□□□□ -1.08
CDC42BPA-206ENST00000429440 LGI4Q8N135 537 aa8.31□□□□□ -1.08
CDC42BPA-206ENST00000429440 GPR137CQ8N3F9 429 aa8.31□□□□□ -1.08
CDC42BPA-206ENST00000429440 CCDC54Q8NEL0 328 aa8.31□□□□□ -1.08
CDC42BPA-206ENST00000429440 SLC24A4Q8NFF2 622 aa8.31□□□□□ -1.08
CDC42BPA-206ENST00000429440 STOML3Q8TAV4 291 aa8.31□□□□□ -1.08
CDC42BPA-206ENST00000429440 UBA3Q8TBC4 463 aa8.31□□□□□ -1.08
CDC42BPA-206ENST00000429440 STAG3L4Q8TBR4 150 aa8.31□□□□□ -1.08
CDC42BPA-206ENST00000429440 ZNF382Q96SR6 550 aa8.31□□□□□ -1.08
CDC42BPA-206ENST00000429440 FAIM2Q9BWQ8 316 aa8.31□□□□□ -1.08
CDC42BPA-206ENST00000429440 DUSP16Q9BY84 665 aa8.31□□□□□ -1.08
CDC42BPA-206ENST00000429440 DPY30Q9C005 99 aa8.31□□□□□ -1.08
CDC42BPA-206ENST00000429440 PTGES2Q9H7Z7 377 aa8.31□□□□□ -1.08
CDC42BPA-206ENST00000429440 SFXN1Q9H9B4 322 aa8.31□□□□□ -1.08
CDC42BPA-206ENST00000429440 ELP3Q9H9T3 547 aa8.31□□□□□ -1.08
CDC42BPA-206ENST00000429440 ACKR4Q9NPB9 350 aa8.31□□□□□ -1.08
CDC42BPA-206ENST00000429440 MED17Q9NVC6 651 aa8.31□□□□□ -1.08
CDC42BPA-206ENST00000429440 RLIMQ9NVW2 624 aa8.31□□□□□ -1.08
CDC42BPA-206ENST00000429440 SLC35A3Q9Y2D2 325 aa8.31□□□□□ -1.08
CDC42BPA-206ENST00000429440 GBF1Q92538 1859 aa8.3□□□□□ -1.08
CDC42BPA-206ENST00000429440 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP8.3□□□□□ -1.08
CDC42BPA-206ENST00000429440 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.3□□□□□ -1.08
CDC42BPA-206ENST00000429440 GNG14A0A1W2PPG7 69 aa8.3□□□□□ -1.08
CDC42BPA-206ENST00000429440 HSBP1L1C9JCN9 74 aa8.3□□□□□ -1.08
CDC42BPA-206ENST00000429440 FGF16O43320 207 aa8.3□□□□□ -1.08
CDC42BPA-206ENST00000429440 SMAD6O43541 496 aaKnown RBP8.3□□□□□ -1.08
CDC42BPA-206ENST00000429440 GSTZ1O43708 216 aaPredicted RBP8.3□□□□□ -1.08
CDC42BPA-206ENST00000429440 CILPO75339 1184 aa8.3□□□□□ -1.08
CDC42BPA-206ENST00000429440 SH3BGRLO75368 114 aa8.3□□□□□ -1.08
CDC42BPA-206ENST00000429440 UBL3O95164 117 aa8.3□□□□□ -1.08
CDC42BPA-206ENST00000429440 SLC25A27O95847 323 aa8.3□□□□□ -1.08
CDC42BPA-206ENST00000429440 ANXA2P07355 339 aaKnown RBP8.3□□□□□ -1.08
CDC42BPA-206ENST00000429440 C6P13671 934 aa8.3□□□□□ -1.08
CDC42BPA-206ENST00000429440 ACPPP15309 386 aa8.3□□□□□ -1.08
CDC42BPA-206ENST00000429440 PTPN6P29350 595 aa8.3□□□□□ -1.08
CDC42BPA-206ENST00000429440 MPIP34949 423 aa8.3□□□□□ -1.08
CDC42BPA-206ENST00000429440 RPL3P39023 403 aaKnown RBP8.3□□□□□ -1.08
CDC42BPA-206ENST00000429440 OR1G1P47890 313 aa8.3□□□□□ -1.08
CDC42BPA-206ENST00000429440 DAOAP59103 153 aa8.3□□□□□ -1.08
CDC42BPA-206ENST00000429440 NRG1Q02297 640 aaPredicted RBP8.3□□□□□ -1.08
CDC42BPA-206ENST00000429440 ZNF177Q13360 481 aaPredicted RBP8.3□□□□□ -1.08
CDC42BPA-206ENST00000429440 GAMTQ14353 236 aa8.3□□□□□ -1.08
CDC42BPA-206ENST00000429440 GRB14Q14449 540 aa8.3□□□□□ -1.08
CDC42BPA-206ENST00000429440 RSU1Q15404 277 aa8.3□□□□□ -1.08
CDC42BPA-206ENST00000429440 OCLNQ16625 522 aa8.3□□□□□ -1.08
CDC42BPA-206ENST00000429440 ATAT1Q5SQI0 421 aa8.3□□□□□ -1.08
CDC42BPA-206ENST00000429440 NCMAPQ5T1S8 102 aa8.3□□□□□ -1.08
CDC42BPA-206ENST00000429440 TMEM71Q6P5X7 295 aa8.3□□□□□ -1.08
CDC42BPA-206ENST00000429440 PLPPR4Q7Z2D5 763 aa8.3□□□□□ -1.08
CDC42BPA-206ENST00000429440 FBXO16Q8IX29 292 aaPredicted RBP8.3□□□□□ -1.08
CDC42BPA-206ENST00000429440 SLC35F3Q8IY50 421 aa8.3□□□□□ -1.08
CDC42BPA-206ENST00000429440 PRSS58Q8IYP2 241 aa8.3□□□□□ -1.08
CDC42BPA-206ENST00000429440 OR52N2Q8NGI0 321 aa8.3□□□□□ -1.08
CDC42BPA-206ENST00000429440 RNF139Q8WU17 664 aa8.3□□□□□ -1.08
CDC42BPA-206ENST00000429440 NUDT8Q8WV74 236 aa8.3□□□□□ -1.08
CDC42BPA-206ENST00000429440 WNT2BQ93097 391 aa8.3□□□□□ -1.08
CDC42BPA-206ENST00000429440 RFKQ969G6 155 aa8.3□□□□□ -1.08
CDC42BPA-206ENST00000429440 ARL11Q969Q4 196 aa8.3□□□□□ -1.08
CDC42BPA-206ENST00000429440 MTERF1Q99551 399 aaKnown RBP8.3□□□□□ -1.08
CDC42BPA-206ENST00000429440 ELOVL4Q9GZR5 314 aa8.3□□□□□ -1.08
CDC42BPA-206ENST00000429440 BEX1Q9HBH7 125 aa8.3□□□□□ -1.08
CDC42BPA-206ENST00000429440 CTPS2Q9NRF8 586 aa8.3□□□□□ -1.08
CDC42BPA-206ENST00000429440 SEMA3GQ9NS98 782 aa8.3□□□□□ -1.08
CDC42BPA-206ENST00000429440 SLC6A13Q9NSD5 602 aa8.3□□□□□ -1.08
CDC42BPA-206ENST00000429440 SLC2A6Q9UGQ3 507 aa8.3□□□□□ -1.08
CDC42BPA-206ENST00000429440 GDF2Q9UK05 429 aaPredicted RBP8.3□□□□□ -1.08
CDC42BPA-206ENST00000429440 FZD10Q9ULW2 581 aa8.3□□□□□ -1.08
CDC42BPA-206ENST00000429440 LHX6Q9UPM6 363 aa8.3□□□□□ -1.08
CDC42BPA-206ENST00000429440 TRIP11Q15643 1979 aa8.3□□□□□ -1.08
CDC42BPA-206ENST00000429440 ARRDC5A6NEK1 342 aa8.3□□□□□ -1.08
CDC42BPA-206ENST00000429440 MAN2B1O00754 1011 aa8.3□□□□□ -1.08
CDC42BPA-206ENST00000429440 PIP5K1CO60331 668 aa8.3□□□□□ -1.08
CDC42BPA-206ENST00000429440 F12P00748 615 aaPredicted RBP8.3□□□□□ -1.08
CDC42BPA-206ENST00000429440 EIF4EP06730 217 aaKnown RBP8.3□□□□□ -1.08
CDC42BPA-206ENST00000429440 SRPRAP08240 638 aaKnown RBP8.3□□□□□ -1.08
CDC42BPA-206ENST00000429440 ANKRD34CP0C6C1 535 aa8.3□□□□□ -1.08
CDC42BPA-206ENST00000429440 RAB5AP20339 215 aa8.3□□□□□ -1.08
CDC42BPA-206ENST00000429440 FDXRP22570 491 aa8.3□□□□□ -1.08
CDC42BPA-206ENST00000429440 CHI3L1P36222 383 aaPredicted RBP8.3□□□□□ -1.08
CDC42BPA-206ENST00000429440 ZNF140P52738 457 aaPredicted RBP8.3□□□□□ -1.08
CDC42BPA-206ENST00000429440 SLC26A5P58743 744 aa8.3□□□□□ -1.08
CDC42BPA-206ENST00000429440 SIM1P81133 766 aaPredicted RBP8.3□□□□□ -1.08
CDC42BPA-206ENST00000429440 RFTN2Q52LD8 501 aaPredicted RBP8.3□□□□□ -1.08
CDC42BPA-206ENST00000429440 RIPPLY2Q5TAB7 128 aa8.3□□□□□ -1.08
CDC42BPA-206ENST00000429440 PAQR6Q6TCH4 344 aa8.3□□□□□ -1.08
CDC42BPA-206ENST00000429440 MPZL3Q6UWV2 235 aa8.3□□□□□ -1.08
CDC42BPA-206ENST00000429440 ZNF551Q7Z340 670 aaPredicted RBP8.3□□□□□ -1.08
CDC42BPA-206ENST00000429440 ANKRD33Q7Z3H0 272 aa8.3□□□□□ -1.08
CDC42BPA-206ENST00000429440 CDK20Q8IZL9 346 aa8.3□□□□□ -1.08
CDC42BPA-206ENST00000429440 BBS10Q8TAM1 723 aa8.3□□□□□ -1.08
CDC42BPA-206ENST00000429440 TCTN2Q96GX1 697 aa8.3□□□□□ -1.08
CDC42BPA-206ENST00000429440 TBL1YQ9BQ87 522 aa8.3□□□□□ -1.08
CDC42BPA-206ENST00000429440 FUZQ9BT04 418 aa8.3□□□□□ -1.08
CDC42BPA-206ENST00000429440 RSRP1Q9BUV0 290 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms