RNA–Protein interactions for RNA: ENST00000422991.1

COL7A1-202, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-202ENST00000422991 VEZF1Q14119 521 aa15.51■□□□□ 0.07
COL7A1-202ENST00000422991 FGFBP1Q14512 234 aa15.51■□□□□ 0.07
COL7A1-202ENST00000422991 SAMD4BQ5PRF9 694 aaKnown RBP15.51■□□□□ 0.07
COL7A1-202ENST00000422991 KRT73Q86Y46 540 aa15.51■□□□□ 0.07
COL7A1-202ENST00000422991 MISPQ8IVT2 679 aa15.51■□□□□ 0.07
COL7A1-202ENST00000422991 GATSQ8NAP1 163 aa15.51■□□□□ 0.07
COL7A1-202ENST00000422991 WDR60Q8WVS4 1066 aa15.51■□□□□ 0.07
COL7A1-202ENST00000422991 CDRT15Q96T59 188 aa15.51■□□□□ 0.07
COL7A1-202ENST00000422991 KCTD14Q9BQ13 255 aaPredicted RBP15.51■□□□□ 0.07
COL7A1-202ENST00000422991 TTTY12Q9BZ98 90 aa15.51■□□□□ 0.07
COL7A1-202ENST00000422991 ZFP64Q9NPA5 681 aa15.51■□□□□ 0.07
COL7A1-202ENST00000422991 SDHAF3Q9NRP4 125 aa15.51■□□□□ 0.07
COL7A1-202ENST00000422991 PPP4R1LQ9P1A2 415 aa15.51■□□□□ 0.07
COL7A1-202ENST00000422991 ANAPC2Q9UJX6 822 aa15.51■□□□□ 0.07
COL7A1-202ENST00000422991 GPC6Q9Y625 555 aaPredicted RBP15.51■□□□□ 0.07
COL7A1-202ENST00000422991 B4DXG7 233 aa15.5■□□□□ 0.07
COL7A1-202ENST00000422991 H3BNH8 94 aa15.5■□□□□ 0.07
COL7A1-202ENST00000422991 GNB5O14775 395 aa15.5■□□□□ 0.07
COL7A1-202ENST00000422991 THBS1P07996 1170 aa15.5■□□□□ 0.07
COL7A1-202ENST00000422991 HSD17B1P14061 328 aa15.5■□□□□ 0.07
COL7A1-202ENST00000422991 NID1P14543 1247 aa15.5■□□□□ 0.07
COL7A1-202ENST00000422991 ELAVL4P26378 380 aaKnown RBP15.5■□□□□ 0.07
COL7A1-202ENST00000422991 ADH7P40394 386 aa15.5■□□□□ 0.07
COL7A1-202ENST00000422991 GABPB1Q06547 395 aaPredicted RBP15.5■□□□□ 0.07
COL7A1-202ENST00000422991 HYAL4Q2M3T9 481 aa15.5■□□□□ 0.07
COL7A1-202ENST00000422991 SPATS1Q496A3 300 aa15.5■□□□□ 0.07
COL7A1-202ENST00000422991 RNFT1Q5M7Z0 435 aa15.5■□□□□ 0.07
COL7A1-202ENST00000422991 INTS11Q5TA45 600 aaKnown RBP15.5■□□□□ 0.07
COL7A1-202ENST00000422991 TIGD3Q6B0B8 471 aa15.5■□□□□ 0.07
COL7A1-202ENST00000422991 CCDC80Q76M96 950 aa15.5■□□□□ 0.07
COL7A1-202ENST00000422991 RNF148Q8N7C7 305 aa15.5■□□□□ 0.07
COL7A1-202ENST00000422991 WDSUB1Q8N9V3 476 aa15.5■□□□□ 0.07
COL7A1-202ENST00000422991 FAM71CQ8NEG0 241 aa15.5■□□□□ 0.07
COL7A1-202ENST00000422991 OR52P1PQ8NH57 321 aa15.5■□□□□ 0.07
COL7A1-202ENST00000422991 PHOSPHO1Q8TCT1 267 aa15.5■□□□□ 0.07
COL7A1-202ENST00000422991 DUSP19Q8WTR2 217 aa15.5■□□□□ 0.07
COL7A1-202ENST00000422991 JSRP1Q96MG2 331 aaPredicted RBP15.5■□□□□ 0.07
COL7A1-202ENST00000422991 ZNF607Q96SK3 696 aa15.5■□□□□ 0.07
COL7A1-202ENST00000422991 HHATLQ9HCP6 504 aa15.5■□□□□ 0.07
COL7A1-202ENST00000422991 ST6GALNAC1Q9NSC7 600 aaPredicted RBP15.5■□□□□ 0.07
COL7A1-202ENST00000422991 CD300AQ9UGN4 299 aa15.5■□□□□ 0.07
COL7A1-202ENST00000422991 PACSIN3Q9UKS6 424 aa15.5■□□□□ 0.07
COL7A1-202ENST00000422991 ZNF443Q9Y2A4 671 aaPredicted RBP15.5■□□□□ 0.07
COL7A1-202ENST00000422991 CLDN24A6NM45 220 aa15.49■□□□□ 0.07
COL7A1-202ENST00000422991 EBAG9O00559 213 aa15.49■□□□□ 0.07
COL7A1-202ENST00000422991 OIP5O43482 229 aa15.49■□□□□ 0.07
COL7A1-202ENST00000422991 ATP5HO75947 161 aa15.49■□□□□ 0.07
COL7A1-202ENST00000422991 PDE9AO76083 593 aa15.49■□□□□ 0.07
COL7A1-202ENST00000422991 PABPC4LP0CB38 370 aaKnown RBP15.49■□□□□ 0.07
COL7A1-202ENST00000422991 UBL4AP11441 157 aa15.49■□□□□ 0.07
COL7A1-202ENST00000422991 ENDOUP21128 410 aaKnown RBP15.49■□□□□ 0.07
COL7A1-202ENST00000422991 PLGLB1Q02325 96 aa15.49■□□□□ 0.07
COL7A1-202ENST00000422991 PLAURQ03405 335 aa15.49■□□□□ 0.07
COL7A1-202ENST00000422991 ZNF117Q03924 483 aa15.49■□□□□ 0.07
COL7A1-202ENST00000422991 C17orf67Q0P5P2 114 aa15.49■□□□□ 0.07
COL7A1-202ENST00000422991 CEACAM7Q14002 265 aa15.49■□□□□ 0.07
COL7A1-202ENST00000422991 DNAL1Q4LDG9 190 aa15.49■□□□□ 0.07
COL7A1-202ENST00000422991 LIN52Q52LA3 116 aa15.49■□□□□ 0.07
COL7A1-202ENST00000422991 ZNF836Q6ZNA1 936 aa15.49■□□□□ 0.07
COL7A1-202ENST00000422991 EIF3MQ7L2H7 374 aaKnown RBP15.49■□□□□ 0.07
COL7A1-202ENST00000422991 PATL1Q86TB9 770 aaKnown RBP15.49■□□□□ 0.07
COL7A1-202ENST00000422991 VRK2Q86Y07 508 aa15.49■□□□□ 0.07
COL7A1-202ENST00000422991 PLCZ1Q86YW0 608 aa15.49■□□□□ 0.07
COL7A1-202ENST00000422991 CMIPQ8IY22 773 aa15.49■□□□□ 0.07
COL7A1-202ENST00000422991 ARHGAP24Q8N264 748 aa15.49■□□□□ 0.07
COL7A1-202ENST00000422991 FADS6Q8N9I5 356 aa15.49■□□□□ 0.07
COL7A1-202ENST00000422991 OR1J4Q8NGS1 313 aa15.49■□□□□ 0.07
COL7A1-202ENST00000422991 SPATA5L1Q9BVQ7 753 aa15.49■□□□□ 0.07
COL7A1-202ENST00000422991 ZNF703Q9H7S9 590 aaPredicted RBP15.49■□□□□ 0.07
COL7A1-202ENST00000422991 CACYBPQ9HB71 228 aaKnown RBP15.49■□□□□ 0.07
COL7A1-202ENST00000422991 PRPF19Q9UMS4 504 aaKnown RBP15.49■□□□□ 0.07
COL7A1-202ENST00000422991 SLC35A3Q9Y2D2 325 aa15.49■□□□□ 0.07
COL7A1-202ENST00000422991 NTNG1Q9Y2I2 539 aa15.49■□□□□ 0.07
COL7A1-202ENST00000422991 C15orf41Q9Y2V0 281 aa15.49■□□□□ 0.07
COL7A1-202ENST00000422991 IFT52Q9Y366 437 aa15.49■□□□□ 0.07
COL7A1-202ENST00000422991 FAM166BA8MTA8 275 aa15.48■□□□□ 0.07
COL7A1-202ENST00000422991 GYG2O15488 501 aa15.48■□□□□ 0.07
COL7A1-202ENST00000422991 BCAS1O75363 584 aaPredicted RBP15.48■□□□□ 0.07
COL7A1-202ENST00000422991 CSTAP01040 98 aa15.48■□□□□ 0.07
COL7A1-202ENST00000422991 RFPL3SP0C7P2 107 aa15.48■□□□□ 0.07
COL7A1-202ENST00000422991 IL7RP16871 459 aa15.48■□□□□ 0.07
COL7A1-202ENST00000422991 ZNF24P17028 368 aa15.48■□□□□ 0.07
COL7A1-202ENST00000422991 HTR1EP28566 365 aa15.48■□□□□ 0.07
COL7A1-202ENST00000422991 CRYBA2P53672 197 aa15.48■□□□□ 0.07
COL7A1-202ENST00000422991 PPIAP62937 165 aaKnown RBP15.48■□□□□ 0.07
COL7A1-202ENST00000422991 EEF1A1P68104 462 aaKnown RBP15.48■□□□□ 0.07
COL7A1-202ENST00000422991 KCNJ10P78508 379 aa15.48■□□□□ 0.07
COL7A1-202ENST00000422991 SKP2Q13309 424 aa15.48■□□□□ 0.07
COL7A1-202ENST00000422991 LARS2Q15031 903 aaKnown RBP15.48■□□□□ 0.07
COL7A1-202ENST00000422991 FXNQ16595 210 aa15.48■□□□□ 0.07
COL7A1-202ENST00000422991 NDUFAF6Q330K2 333 aa15.48■□□□□ 0.07
COL7A1-202ENST00000422991 PRR30Q53SZ7 412 aaPredicted RBP15.48■□□□□ 0.07
COL7A1-202ENST00000422991 MRPL2Q5T653 305 aaKnown RBP15.48■□□□□ 0.07
COL7A1-202ENST00000422991 RNF220Q5VTB9 566 aa15.48■□□□□ 0.07
COL7A1-202ENST00000422991 OR5M10Q6IEU7 315 aa15.48■□□□□ 0.07
COL7A1-202ENST00000422991 FAM180AQ6UWF9 173 aa15.48■□□□□ 0.07
COL7A1-202ENST00000422991 CCDC121Q6ZUS5 278 aa15.48■□□□□ 0.07
COL7A1-202ENST00000422991 SLC22A16Q86VW1 577 aa15.48■□□□□ 0.07
COL7A1-202ENST00000422991 ARMC8Q8IUR7 673 aa15.48■□□□□ 0.07
COL7A1-202ENST00000422991 TMEM251Q8N6I4 163 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms