RNA–Protein interactions for RNA: ENST00000407082.3

SMARCB1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 5 BASIC

Gene SMARCB1, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-203ENST00000407082 B4GALT2O60909 372 aa11.99□□□□□ -0.49
SMARCB1-203ENST00000407082 ZBTB11O95625 1053 aaPredicted RBP11.99□□□□□ -0.49
SMARCB1-203ENST00000407082 STSP08842 583 aa11.99□□□□□ -0.49
SMARCB1-203ENST00000407082 CCNYL3P0C7X3 344 aa11.99□□□□□ -0.49
SMARCB1-203ENST00000407082 ZNF888P0CJ79 500 aaPredicted RBP11.99□□□□□ -0.49
SMARCB1-203ENST00000407082 SMIM10L1P0DMW3 83 aa11.99□□□□□ -0.49
SMARCB1-203ENST00000407082 CSF2RBP32927 897 aa11.99□□□□□ -0.49
SMARCB1-203ENST00000407082 FEN1P39748 380 aaKnown RBP11.99□□□□□ -0.49
SMARCB1-203ENST00000407082 TAS2R41P59536 307 aa11.99□□□□□ -0.49
SMARCB1-203ENST00000407082 AQP6Q13520 282 aa11.99□□□□□ -0.49
SMARCB1-203ENST00000407082 MAPK11Q15759 364 aa11.99□□□□□ -0.49
SMARCB1-203ENST00000407082 CLPPQ16740 277 aaPredicted RBP11.99□□□□□ -0.49
SMARCB1-203ENST00000407082 CYP27C1Q4G0S4 372 aa11.99□□□□□ -0.49
SMARCB1-203ENST00000407082 ENTPD8Q5MY95 495 aa11.99□□□□□ -0.49
SMARCB1-203ENST00000407082 PGBD2Q6P3X8 592 aa11.99□□□□□ -0.49
SMARCB1-203ENST00000407082 TMEM71Q6P5X7 295 aa11.99□□□□□ -0.49
SMARCB1-203ENST00000407082 TMEM107Q6UX40 140 aa11.99□□□□□ -0.49
SMARCB1-203ENST00000407082 TMPRSS9Q7Z410 1059 aa11.99□□□□□ -0.49
SMARCB1-203ENST00000407082 B3GNT7Q8NFL0 401 aa11.99□□□□□ -0.49
SMARCB1-203ENST00000407082 OR4D9Q8NGE8 314 aa11.99□□□□□ -0.49
SMARCB1-203ENST00000407082 UBE2FQ969M7 185 aa11.99□□□□□ -0.49
SMARCB1-203ENST00000407082 SMIM10Q96HG1 83 aa11.99□□□□□ -0.49
SMARCB1-203ENST00000407082 ZNF681Q96N22 645 aa11.99□□□□□ -0.49
SMARCB1-203ENST00000407082 TGM7Q96PF1 710 aa11.99□□□□□ -0.49
SMARCB1-203ENST00000407082 SLC38A2Q96QD8 506 aa11.99□□□□□ -0.49
SMARCB1-203ENST00000407082 OR2A14Q96R47 310 aa11.99□□□□□ -0.49
SMARCB1-203ENST00000407082 ARHGDIGQ99819 225 aa11.99□□□□□ -0.49
SMARCB1-203ENST00000407082 DPYSL5Q9BPU6 564 aa11.99□□□□□ -0.49
SMARCB1-203ENST00000407082 ZFYVE21Q9BQ24 234 aa11.99□□□□□ -0.49
SMARCB1-203ENST00000407082 FUZQ9BT04 418 aa11.99□□□□□ -0.49
SMARCB1-203ENST00000407082 MND1Q9BWT6 205 aa11.99□□□□□ -0.49
SMARCB1-203ENST00000407082 POLDIP3Q9BY77 421 aaKnown RBP11.99□□□□□ -0.49
SMARCB1-203ENST00000407082 AICDAQ9GZX7 198 aa11.99□□□□□ -0.49
SMARCB1-203ENST00000407082 RAB33BQ9H082 229 aa11.99□□□□□ -0.49
SMARCB1-203ENST00000407082 SERHL2Q9H4I8 314 aa11.99□□□□□ -0.49
SMARCB1-203ENST00000407082 FAIMQ9NVQ4 179 aa11.99□□□□□ -0.49
SMARCB1-203ENST00000407082 RHCGQ9UBD6 479 aa11.99□□□□□ -0.49
SMARCB1-203ENST00000407082 REV1Q9UBZ9 1251 aa11.99□□□□□ -0.49
SMARCB1-203ENST00000407082 EPHA6Q9UF33 1036 aa11.99□□□□□ -0.49
SMARCB1-203ENST00000407082 KLHL3Q9UH77 587 aa11.99□□□□□ -0.49
SMARCB1-203ENST00000407082 A4GNTQ9UNA3 340 aa11.99□□□□□ -0.49
SMARCB1-203ENST00000407082 SRPK3Q9UPE1 567 aa11.99□□□□□ -0.49
SMARCB1-203ENST00000407082 A0A087WV62 115 aa11.98□□□□□ -0.49
SMARCB1-203ENST00000407082 A0A0J9YY10 115 aa11.98□□□□□ -0.49
SMARCB1-203ENST00000407082 PNMA8CA0A1B0GUJ8 204 aa11.98□□□□□ -0.49
SMARCB1-203ENST00000407082 CCRL2O00421 344 aa11.98□□□□□ -0.49
SMARCB1-203ENST00000407082 RECKO95980 971 aa11.98□□□□□ -0.49
SMARCB1-203ENST00000407082 LCKP06239 509 aa11.98□□□□□ -0.49
SMARCB1-203ENST00000407082 CHRM4P08173 479 aa11.98□□□□□ -0.49
SMARCB1-203ENST00000407082 ALOX5P09917 674 aa11.98□□□□□ -0.49
SMARCB1-203ENST00000407082 PORP16435 677 aaPredicted RBP11.98□□□□□ -0.49
SMARCB1-203ENST00000407082 UGT2B7P16662 529 aa11.98□□□□□ -0.49
SMARCB1-203ENST00000407082 ALOX12P18054 663 aa11.98□□□□□ -0.49
SMARCB1-203ENST00000407082 S100A5P33763 92 aa11.98□□□□□ -0.49
SMARCB1-203ENST00000407082 ETV5P41161 510 aa11.98□□□□□ -0.49
SMARCB1-203ENST00000407082 STAT5AP42229 794 aa11.98□□□□□ -0.49
SMARCB1-203ENST00000407082 GFERP55789 205 aa11.98□□□□□ -0.49
SMARCB1-203ENST00000407082 VBP1P61758 197 aa11.98□□□□□ -0.49
SMARCB1-203ENST00000407082 COPZ1P61923 177 aa11.98□□□□□ -0.49
SMARCB1-203ENST00000407082 KRR1Q13601 381 aaKnown RBP11.98□□□□□ -0.49
SMARCB1-203ENST00000407082 GPR19Q15760 415 aa11.98□□□□□ -0.49
SMARCB1-203ENST00000407082 ZSWIM7Q19AV6 140 aa11.98□□□□□ -0.49
SMARCB1-203ENST00000407082 ARHGAP11BQ3KRB8 267 aa11.98□□□□□ -0.49
SMARCB1-203ENST00000407082 ARMCX4Q5H9R4 360 aa11.98□□□□□ -0.49
SMARCB1-203ENST00000407082 SNAP47Q5SQN1 464 aa11.98□□□□□ -0.49
SMARCB1-203ENST00000407082 PHF19Q5T6S3 580 aa11.98□□□□□ -0.49
SMARCB1-203ENST00000407082 MFSD4BQ5TF39 518 aa11.98□□□□□ -0.49
SMARCB1-203ENST00000407082 C18orf63Q68DL7 685 aa11.98□□□□□ -0.49
SMARCB1-203ENST00000407082 FAM180BQ6P0A1 224 aa11.98□□□□□ -0.49
SMARCB1-203ENST00000407082 FBXO42Q6P3S6 717 aa11.98□□□□□ -0.49
SMARCB1-203ENST00000407082 PODNL1Q6PEZ8 512 aa11.98□□□□□ -0.49
SMARCB1-203ENST00000407082 CCDC103Q8IW40 242 aa11.98□□□□□ -0.49
SMARCB1-203ENST00000407082 SLC15A4Q8N697 577 aa11.98□□□□□ -0.49
SMARCB1-203ENST00000407082 OR5D16Q8NGK9 328 aa11.98□□□□□ -0.49
SMARCB1-203ENST00000407082 OR6Q1Q8NGQ2 317 aa11.98□□□□□ -0.49
SMARCB1-203ENST00000407082 PIGXQ8TBF5 258 aa11.98□□□□□ -0.49
SMARCB1-203ENST00000407082 TEX47Q8TBZ9 253 aa11.98□□□□□ -0.49
SMARCB1-203ENST00000407082 DCSTAMPQ9H295 470 aa11.98□□□□□ -0.49
SMARCB1-203ENST00000407082 SEMA6CQ9H3T2 930 aa11.98□□□□□ -0.49
SMARCB1-203ENST00000407082 SLC25A19Q9HC21 320 aa11.98□□□□□ -0.49
SMARCB1-203ENST00000407082 POLE3Q9NRF9 147 aa11.98□□□□□ -0.49
SMARCB1-203ENST00000407082 GALNT8Q9NY28 637 aa11.98□□□□□ -0.49
SMARCB1-203ENST00000407082 GPR83Q9NYM4 423 aa11.98□□□□□ -0.49
SMARCB1-203ENST00000407082 CCDC59Q9P031 241 aaKnown RBP11.98□□□□□ -0.49
SMARCB1-203ENST00000407082 SEC14L4Q9UDX3 406 aa11.98□□□□□ -0.49
SMARCB1-203ENST00000407082 PLEKHB1Q9UF11 243 aaPredicted RBP11.98□□□□□ -0.49
SMARCB1-203ENST00000407082 OSGIN1Q9UJX0 560 aa11.98□□□□□ -0.49
SMARCB1-203ENST00000407082 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.98□□□□□ -0.49
SMARCB1-203ENST00000407082 ICE1Q9Y2F5 2266 aa11.98□□□□□ -0.49
SMARCB1-203ENST00000407082 NINQ8N4C6 2090 aa11.98□□□□□ -0.49
SMARCB1-203ENST00000407082 IGHV5-10-1A0A0J9YXX1 117 aa11.97□□□□□ -0.49
SMARCB1-203ENST00000407082 CLEC18AA5D8T8 446 aa11.97□□□□□ -0.49
SMARCB1-203ENST00000407082 GLOD5A6NK44 160 aa11.97□□□□□ -0.49
SMARCB1-203ENST00000407082 CYP7B1O75881 506 aa11.97□□□□□ -0.49
SMARCB1-203ENST00000407082 OR5F1O95221 314 aa11.97□□□□□ -0.49
SMARCB1-203ENST00000407082 THBS1P07996 1170 aa11.97□□□□□ -0.49
SMARCB1-203ENST00000407082 OCM2P0CE71 109 aa11.97□□□□□ -0.49
SMARCB1-203ENST00000407082 OCMP0CE72 109 aaPredicted RBP11.97□□□□□ -0.49
SMARCB1-203ENST00000407082 ADORA3P0DMS8 318 aa11.97□□□□□ -0.49
SMARCB1-203ENST00000407082 CD40LGP29965 261 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms