RNA–Protein interactions for RNA: ENST00000400301.5

USP48-204, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 1 (best) BASIC

Gene USP48, Length 4,309 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-204ENST00000400301 TP53I3Q53FA7 332 aa17.33■□□□□ 0.37
USP48-204ENST00000400301 FAAH2Q6GMR7 532 aa17.33■□□□□ 0.37
USP48-204ENST00000400301 NANOGP1Q8N7R0 232 aa17.33■□□□□ 0.37
USP48-204ENST00000400301 NSMAFQ92636 917 aa17.33■□□□□ 0.37
USP48-204ENST00000400301 LAMP5Q9UJQ1 280 aa17.33■□□□□ 0.37
USP48-204ENST00000400301 BAIAP2Q9UQB8 552 aa17.33■□□□□ 0.37
USP48-204ENST00000400301 IQCMA0A1B0GVH7 501 aa17.33■□□□□ 0.36
USP48-204ENST00000400301 HCRTR2O43614 444 aa17.33■□□□□ 0.36
USP48-204ENST00000400301 NDUFB2O95178 105 aa17.33■□□□□ 0.36
USP48-204ENST00000400301 FCER2P06734 321 aa17.33■□□□□ 0.36
USP48-204ENST00000400301 PIPP12273 146 aaPredicted RBP17.33■□□□□ 0.36
USP48-204ENST00000400301 GABRA5P31644 462 aa17.33■□□□□ 0.36
USP48-204ENST00000400301 MAP3K8P41279 467 aa17.33■□□□□ 0.36
USP48-204ENST00000400301 MAN2A2P49641 1150 aa17.33■□□□□ 0.36
USP48-204ENST00000400301 SEC23BQ15437 767 aa17.33■□□□□ 0.36
USP48-204ENST00000400301 TMEM64Q6YI46 380 aa17.33■□□□□ 0.36
USP48-204ENST00000400301 PHC2Q8IXK0 858 aa17.33■□□□□ 0.36
USP48-204ENST00000400301 SLC7A5P1Q8MH63 180 aa17.33■□□□□ 0.36
USP48-204ENST00000400301 SLIRPQ9GZT3 109 aaKnown RBP17.33■□□□□ 0.36
USP48-204ENST00000400301 DIABLOQ9NR28 239 aa17.33■□□□□ 0.36
USP48-204ENST00000400301 POU2F3Q9UKI9 436 aa17.33■□□□□ 0.36
USP48-204ENST00000400301 M0R082 166 aa17.33■□□□□ 0.36
USP48-204ENST00000400301 NCR1O76036 304 aa17.33■□□□□ 0.36
USP48-204ENST00000400301 NUP62P37198 522 aaPredicted RBP17.33■□□□□ 0.36
USP48-204ENST00000400301 AVL9Q8NBF6 648 aa17.33■□□□□ 0.36
USP48-204ENST00000400301 TMEM255BQ8WV15 326 aa17.33■□□□□ 0.36
USP48-204ENST00000400301 TANKQ92844 425 aa17.33■□□□□ 0.36
USP48-204ENST00000400301 S100A13Q99584 98 aa17.33■□□□□ 0.36
USP48-204ENST00000400301 GINS4Q9BRT9 223 aa17.33■□□□□ 0.36
USP48-204ENST00000400301 LDHAL6BQ9BYZ2 381 aaPredicted RBP17.33■□□□□ 0.36
USP48-204ENST00000400301 NANSQ9NR45 359 aa17.33■□□□□ 0.36
USP48-204ENST00000400301 GOLGB1Q14789 3259 aaKnown RBP17.33■□□□□ 0.36
USP48-204ENST00000400301 GABRPO00591 440 aa17.33■□□□□ 0.36
USP48-204ENST00000400301 CHRM4P08173 479 aa17.33■□□□□ 0.36
USP48-204ENST00000400301 GSTT2P0CG29 244 aa17.33■□□□□ 0.36
USP48-204ENST00000400301 TRIM23P36406 574 aa17.33■□□□□ 0.36
USP48-204ENST00000400301 GZMMP51124 257 aa17.33■□□□□ 0.36
USP48-204ENST00000400301 NUP54Q7Z3B4 507 aa17.33■□□□□ 0.36
USP48-204ENST00000400301 NKAIN4Q8IVV8 208 aa17.33■□□□□ 0.36
USP48-204ENST00000400301 OR8H3Q8N146 312 aa17.33■□□□□ 0.36
USP48-204ENST00000400301 CHST4Q8NCG5 386 aa17.33■□□□□ 0.36
USP48-204ENST00000400301 ZNF431Q8TF32 576 aaPredicted RBP17.33■□□□□ 0.36
USP48-204ENST00000400301 S100A16Q96FQ6 103 aaKnown RBP17.33■□□□□ 0.36
USP48-204ENST00000400301 TGM7Q96PF1 710 aa17.33■□□□□ 0.36
USP48-204ENST00000400301 TAPBPLQ9BX59 468 aa17.33■□□□□ 0.36
USP48-204ENST00000400301 PIKFYVEQ9Y2I7 2098 aa17.32■□□□□ 0.36
USP48-204ENST00000400301 GREM1O60565 184 aa17.32■□□□□ 0.36
USP48-204ENST00000400301 GNALP38405 381 aa17.32■□□□□ 0.36
USP48-204ENST00000400301 MEPCEQ7L2J0 689 aaKnown RBP17.32■□□□□ 0.36
USP48-204ENST00000400301 FAM26EQ8N5C1 309 aa17.32■□□□□ 0.36
USP48-204ENST00000400301 SDR9C7Q8NEX9 313 aa17.32■□□□□ 0.36
USP48-204ENST00000400301 OR52R1Q8NGF1 315 aa17.32■□□□□ 0.36
USP48-204ENST00000400301 OR13C2Q8NGS9 318 aa17.32■□□□□ 0.36
USP48-204ENST00000400301 OR2A1Q8NGT9 310 aa17.32■□□□□ 0.36
USP48-204ENST00000400301 THAP4Q8WY91 577 aa17.32■□□□□ 0.36
USP48-204ENST00000400301 ALOXE3Q9BYJ1 711 aa17.32■□□□□ 0.36
USP48-204ENST00000400301 SEMA4GQ9NTN9 838 aa17.32■□□□□ 0.36
USP48-204ENST00000400301 TAS2R10Q9NYW0 307 aa17.32■□□□□ 0.36
USP48-204ENST00000400301 CPNE7Q9UBL6 633 aa17.32■□□□□ 0.36
USP48-204ENST00000400301 ICKQ9UPZ9 632 aa17.32■□□□□ 0.36
USP48-204ENST00000400301 GIMD1P0DJR0 217 aa17.32■□□□□ 0.36
USP48-204ENST00000400301 ACTA2P62736 377 aa17.32■□□□□ 0.36
USP48-204ENST00000400301 ACTG2P63267 376 aa17.32■□□□□ 0.36
USP48-204ENST00000400301 MFSD12Q6NUT3 480 aa17.32■□□□□ 0.36
USP48-204ENST00000400301 ZCCHC12Q6PEW1 402 aa17.32■□□□□ 0.36
USP48-204ENST00000400301 KLHL24Q6TFL4 600 aa17.32■□□□□ 0.36
USP48-204ENST00000400301 ZNF547Q8IVP9 402 aa17.32■□□□□ 0.36
USP48-204ENST00000400301 TRMT10AQ8TBZ6 339 aaKnown RBP17.32■□□□□ 0.36
USP48-204ENST00000400301 NKD1Q969G9 470 aa17.32■□□□□ 0.36
USP48-204ENST00000400301 FKBP10Q96AY3 582 aa17.32■□□□□ 0.36
USP48-204ENST00000400301 KCMF1Q9P0J7 381 aa17.32■□□□□ 0.36
USP48-204ENST00000400301 IER3IP1Q9Y5U9 82 aa17.32■□□□□ 0.36
USP48-204ENST00000400301 A0A0J9YY10 115 aa17.32■□□□□ 0.36
USP48-204ENST00000400301 C11orf98E9PRG8 122 aa17.32■□□□□ 0.36
USP48-204ENST00000400301 MAN2B1O00754 1011 aa17.32■□□□□ 0.36
USP48-204ENST00000400301 SOCS6O14544 535 aa17.32■□□□□ 0.36
USP48-204ENST00000400301 PRKAR1BP31321 381 aa17.32■□□□□ 0.36
USP48-204ENST00000400301 GBX1Q14549 363 aa17.32■□□□□ 0.36
USP48-204ENST00000400301 RPTNQ6XPR3 784 aa17.32■□□□□ 0.36
USP48-204ENST00000400301 MBOAT2Q6ZWT7 520 aa17.32■□□□□ 0.36
USP48-204ENST00000400301 GKN2Q86XP6 184 aa17.32■□□□□ 0.36
USP48-204ENST00000400301 TIGD4Q8IY51 512 aa17.32■□□□□ 0.36
USP48-204ENST00000400301 SMPDL3BQ92485 455 aa17.32■□□□□ 0.36
USP48-204ENST00000400301 FAM171A2A8MVW0 826 aa17.31■□□□□ 0.36
USP48-204ENST00000400301 UGT2B7P16662 529 aa17.31■□□□□ 0.36
USP48-204ENST00000400301 APEX1P27695 318 aaKnown RBP17.31■□□□□ 0.36
USP48-204ENST00000400301 ETV5P41161 510 aa17.31■□□□□ 0.36
USP48-204ENST00000400301 ETV1P50549 477 aa17.31■□□□□ 0.36
USP48-204ENST00000400301 SNTB2Q13425 540 aaKnown RBP17.31■□□□□ 0.36
USP48-204ENST00000400301 SLC29A4Q7RTT9 530 aa17.31■□□□□ 0.36
USP48-204ENST00000400301 GDF7Q7Z4P5 450 aa17.31■□□□□ 0.36
USP48-204ENST00000400301 CLDN22Q8N7P3 220 aa17.31■□□□□ 0.36
USP48-204ENST00000400301 CACNG6Q9BXT2 260 aa17.31■□□□□ 0.36
USP48-204ENST00000400301 ELL3Q9HB65 397 aaPredicted RBP17.31■□□□□ 0.36
USP48-204ENST00000400301 SIDT1Q9NXL6 827 aaKnown RBP17.31■□□□□ 0.36
USP48-204ENST00000400301 DPM1O60762 260 aa17.31■□□□□ 0.36
USP48-204ENST00000400301 CISD3P0C7P0 127 aa17.31■□□□□ 0.36
USP48-204ENST00000400301 RABIFP47224 123 aa17.31■□□□□ 0.36
USP48-204ENST00000400301 ARHGAP40Q5TG30 622 aa17.31■□□□□ 0.36
USP48-204ENST00000400301 RPLP0P6Q8NHW5 317 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms