RNA–Protein interactions for RNA: ENST00000394456.9

GTF2F1-201, Transcript of general transcription factor IIF subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2F1, Length 2,731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-201ENST00000394456 MRPS15P82914 257 aaKnown RBP12.54□□□□□ -0.4
GTF2F1-201ENST00000394456 ST3GAL3Q11203 375 aa12.54□□□□□ -0.4
GTF2F1-201ENST00000394456 ASAH1Q13510 395 aa12.54□□□□□ -0.4
GTF2F1-201ENST00000394456 ZNF425Q6IV72 752 aa12.54□□□□□ -0.4
GTF2F1-201ENST00000394456 MFSD12Q6NUT3 480 aa12.54□□□□□ -0.4
GTF2F1-201ENST00000394456 OR4N4Q8N0Y3 316 aa12.54□□□□□ -0.4
GTF2F1-201ENST00000394456 SETD6Q8TBK2 473 aa12.54□□□□□ -0.4
GTF2F1-201ENST00000394456 LCN9Q8WX39 176 aa12.54□□□□□ -0.4
GTF2F1-201ENST00000394456 PATE1Q8WXA2 126 aa12.54□□□□□ -0.4
GTF2F1-201ENST00000394456 RAB11FIP5Q9BXF6 653 aa12.54□□□□□ -0.4
GTF2F1-201ENST00000394456 CCDC86Q9H6F5 360 aaKnown RBP12.54□□□□□ -0.4
GTF2F1-201ENST00000394456 FBRSQ9HAH7 460 aa12.54□□□□□ -0.4
GTF2F1-201ENST00000394456 ZNF780BQ9Y6R6 833 aa12.54□□□□□ -0.4
GTF2F1-201ENST00000394456 LAMA1P25391 3075 aa12.54□□□□□ -0.4
GTF2F1-201ENST00000394456 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.54□□□□□ -0.4
GTF2F1-201ENST00000394456 KLF4O43474 513 aa12.54□□□□□ -0.4
GTF2F1-201ENST00000394456 CHRNB1P11230 501 aa12.54□□□□□ -0.4
GTF2F1-201ENST00000394456 DRD1P21728 446 aa12.54□□□□□ -0.4
GTF2F1-201ENST00000394456 MYL9P24844 172 aa12.54□□□□□ -0.4
GTF2F1-201ENST00000394456 GCGRP47871 477 aa12.54□□□□□ -0.4
GTF2F1-201ENST00000394456 ZNF136P52737 540 aa12.54□□□□□ -0.4
GTF2F1-201ENST00000394456 NFATC4Q14934 902 aa12.54□□□□□ -0.4
GTF2F1-201ENST00000394456 CCDC92Q53HC0 331 aaPredicted RBP12.54□□□□□ -0.4
GTF2F1-201ENST00000394456 FBXO42Q6P3S6 717 aa12.54□□□□□ -0.4
GTF2F1-201ENST00000394456 THSD4Q6ZMP0 1018 aa12.54□□□□□ -0.4
GTF2F1-201ENST00000394456 ZAR1Q86SH2 424 aa12.54□□□□□ -0.4
GTF2F1-201ENST00000394456 OR5T3Q8NGG3 340 aa12.54□□□□□ -0.4
GTF2F1-201ENST00000394456 NEIL3Q8TAT5 605 aa12.54□□□□□ -0.4
GTF2F1-201ENST00000394456 ACOT11Q8WXI4 607 aaPredicted RBP12.54□□□□□ -0.4
GTF2F1-201ENST00000394456 SLC7A6Q92536 515 aa12.54□□□□□ -0.4
GTF2F1-201ENST00000394456 SCARF2Q96GP6 870 aaPredicted RBP12.54□□□□□ -0.4
GTF2F1-201ENST00000394456 ACTRT3Q9BYD9 372 aa12.54□□□□□ -0.4
GTF2F1-201ENST00000394456 SLC22A4Q9H015 551 aa12.54□□□□□ -0.4
GTF2F1-201ENST00000394456 UBQLN3Q9H347 655 aa12.54□□□□□ -0.4
GTF2F1-201ENST00000394456 PPP1R3EQ9H7J1 279 aa12.54□□□□□ -0.4
GTF2F1-201ENST00000394456 ADAP2Q9NPF8 381 aa12.54□□□□□ -0.4
GTF2F1-201ENST00000394456 ZNF624Q9P2J8 865 aaPredicted RBP12.54□□□□□ -0.4
GTF2F1-201ENST00000394456 CCDC182A6NF36 153 aa12.53□□□□□ -0.4
GTF2F1-201ENST00000394456 LANCL1O43813 399 aa12.53□□□□□ -0.4
GTF2F1-201ENST00000394456 IL18Q14116 193 aa12.53□□□□□ -0.4
GTF2F1-201ENST00000394456 FIGNL1Q6PIW4 674 aa12.53□□□□□ -0.4
GTF2F1-201ENST00000394456 RPTNQ6XPR3 784 aa12.53□□□□□ -0.4
GTF2F1-201ENST00000394456 Q8N402 240 aa12.53□□□□□ -0.4
GTF2F1-201ENST00000394456 MFSD9Q8NBP5 474 aa12.53□□□□□ -0.4
GTF2F1-201ENST00000394456 RNF170Q96K19 258 aa12.53□□□□□ -0.4
GTF2F1-201ENST00000394456 WDR92Q96MX6 357 aa12.53□□□□□ -0.4
GTF2F1-201ENST00000394456 PRSS27Q9BQR3 290 aa12.53□□□□□ -0.4
GTF2F1-201ENST00000394456 PITHD1Q9GZP4 211 aaPredicted RBP12.53□□□□□ -0.4
GTF2F1-201ENST00000394456 IL20Q9NYY1 176 aa12.53□□□□□ -0.4
GTF2F1-201ENST00000394456 NLKQ9UBE8 527 aa12.53□□□□□ -0.4
GTF2F1-201ENST00000394456 SCML1Q9UN30 329 aa12.53□□□□□ -0.4
GTF2F1-201ENST00000394456 WDR45Q9Y484 360 aa12.53□□□□□ -0.4
GTF2F1-201ENST00000394456 TTC36A6NLP5 189 aa12.53□□□□□ -0.4
GTF2F1-201ENST00000394456 EIF2S1P05198 315 aaKnown RBP12.53□□□□□ -0.4
GTF2F1-201ENST00000394456 GYPBP06028 91 aa12.53□□□□□ -0.4
GTF2F1-201ENST00000394456 PSKH1P11801 424 aa12.53□□□□□ -0.4
GTF2F1-201ENST00000394456 NOS3P29474 1203 aa12.53□□□□□ -0.4
GTF2F1-201ENST00000394456 OR10A3P58181 314 aa12.53□□□□□ -0.4
GTF2F1-201ENST00000394456 PLAURQ03405 335 aa12.53□□□□□ -0.4
GTF2F1-201ENST00000394456 EXOSC7Q15024 291 aaKnown RBP12.53□□□□□ -0.4
GTF2F1-201ENST00000394456 CD200R1LQ6Q8B3 271 aa12.53□□□□□ -0.4
GTF2F1-201ENST00000394456 AMIGO1Q86WK6 493 aa12.53□□□□□ -0.4
GTF2F1-201ENST00000394456 NRROSQ86YC3 692 aa12.53□□□□□ -0.4
GTF2F1-201ENST00000394456 SLC44A3Q8N4M1 653 aa12.53□□□□□ -0.4
GTF2F1-201ENST00000394456 CYB561A3Q8NBI2 242 aa12.53□□□□□ -0.4
GTF2F1-201ENST00000394456 TTLQ8NG68 377 aa12.53□□□□□ -0.4
GTF2F1-201ENST00000394456 OR10G6Q8NH81 332 aa12.53□□□□□ -0.4
GTF2F1-201ENST00000394456 TMEM246Q9BRR3 403 aa12.53□□□□□ -0.4
GTF2F1-201ENST00000394456 STARD5Q9NSY2 213 aa12.53□□□□□ -0.4
GTF2F1-201ENST00000394456 EXOSC1Q9Y3B2 195 aaKnown RBP12.53□□□□□ -0.4
GTF2F1-201ENST00000394456 C12orf71A8MTZ7 269 aa12.53□□□□□ -0.4
GTF2F1-201ENST00000394456 CTSBP07858 339 aa12.53□□□□□ -0.4
GTF2F1-201ENST00000394456 GABRG2P18507 467 aa12.53□□□□□ -0.4
GTF2F1-201ENST00000394456 HNRNPA2B1P22626 353 aaKnown RBP12.53□□□□□ -0.4
GTF2F1-201ENST00000394456 IGFBP4P22692 258 aa12.53□□□□□ -0.4
GTF2F1-201ENST00000394456 FPR3P25089 353 aa12.53□□□□□ -0.4
GTF2F1-201ENST00000394456 HCCSP53701 268 aa12.53□□□□□ -0.4
GTF2F1-201ENST00000394456 KIAA1024LP59773 190 aa12.53□□□□□ -0.4
GTF2F1-201ENST00000394456 KLHL12Q53G59 568 aa12.53□□□□□ -0.4
GTF2F1-201ENST00000394456 BHLHB9Q6PI77 547 aa12.53□□□□□ -0.4
GTF2F1-201ENST00000394456 ZNF322Q6U7Q0 402 aaPredicted RBP12.53□□□□□ -0.4
GTF2F1-201ENST00000394456 PAQR7Q86WK9 346 aa12.53□□□□□ -0.4
GTF2F1-201ENST00000394456 RDH10Q8IZV5 341 aa12.53□□□□□ -0.4
GTF2F1-201ENST00000394456 RFLNBQ8N5W9 214 aa12.53□□□□□ -0.4
GTF2F1-201ENST00000394456 KCMF1Q9P0J7 381 aa12.53□□□□□ -0.4
GTF2F1-201ENST00000394456 GRIP1Q9Y3R0 1128 aa12.53□□□□□ -0.4
GTF2F1-201ENST00000394456 COLEC10Q9Y6Z7 277 aa12.53□□□□□ -0.4
GTF2F1-201ENST00000394456 TRIOBPQ9H2D6 2365 aa12.52□□□□□ -0.4
GTF2F1-201ENST00000394456 SYT5O00445 386 aa12.52□□□□□ -0.41
GTF2F1-201ENST00000394456 KCNJ13O60928 360 aa12.52□□□□□ -0.41
GTF2F1-201ENST00000394456 RFPL3O75679 317 aa12.52□□□□□ -0.41
GTF2F1-201ENST00000394456 TFPIP10646 304 aa12.52□□□□□ -0.41
GTF2F1-201ENST00000394456 SLC2A2P11168 524 aaPredicted RBP12.52□□□□□ -0.41
GTF2F1-201ENST00000394456 IL9P15248 144 aa12.52□□□□□ -0.41
GTF2F1-201ENST00000394456 CPN2P22792 545 aa12.52□□□□□ -0.41
GTF2F1-201ENST00000394456 CMPK1P30085 196 aa12.52□□□□□ -0.41
GTF2F1-201ENST00000394456 DDOSTP39656 456 aa12.52□□□□□ -0.41
GTF2F1-201ENST00000394456 AGFG1P52594 562 aaKnown RBP12.52□□□□□ -0.41
GTF2F1-201ENST00000394456 MRPS21P82921 87 aaKnown RBP12.52□□□□□ -0.41
GTF2F1-201ENST00000394456 E2F1Q01094 437 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms