RNA–Protein interactions for RNA: ENST00000394440.7

CCT4-201, Transcript of chaperonin containing TCP1 subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCT4, Length 2,520 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT4-201ENST00000394440 ADIPOR1Q96A54 375 aa13.81□□□□□ -0.2
CCT4-201ENST00000394440 GFM1Q96RP9 751 aaKnown RBP13.81□□□□□ -0.2
CCT4-201ENST00000394440 LMF1Q96S06 567 aa13.81□□□□□ -0.2
CCT4-201ENST00000394440 OR8D2Q9GZM6 311 aa13.81□□□□□ -0.2
CCT4-201ENST00000394440 C14orf105Q9NVL8 296 aa13.81□□□□□ -0.2
CCT4-201ENST00000394440 MKL2Q9ULH7 1088 aa13.81□□□□□ -0.2
CCT4-201ENST00000394440 CFL2Q9Y281 166 aa13.81□□□□□ -0.2
CCT4-201ENST00000394440 OR10H1Q9Y4A9 318 aa13.81□□□□□ -0.2
CCT4-201ENST00000394440 FRYLO94915 3013 aa13.8□□□□□ -0.2
CCT4-201ENST00000394440 SYNDIG1LA6NDD5 238 aa13.8□□□□□ -0.2
CCT4-201ENST00000394440 CCDC160A6NGH7 325 aa13.8□□□□□ -0.2
CCT4-201ENST00000394440 H3BN98 237 aa13.8□□□□□ -0.2
CCT4-201ENST00000394440 ZNF701M0R085 212 aaPredicted RBP13.8□□□□□ -0.2
CCT4-201ENST00000394440 POLR1CO15160 346 aaPredicted RBP13.8□□□□□ -0.2
CCT4-201ENST00000394440 SCRG1O75711 98 aa13.8□□□□□ -0.2
CCT4-201ENST00000394440 ZNF883P0CG24 379 aa13.8□□□□□ -0.2
CCT4-201ENST00000394440 FPR3P25089 353 aa13.8□□□□□ -0.2
CCT4-201ENST00000394440 ACAA2P42765 397 aaKnown RBP13.8□□□□□ -0.2
CCT4-201ENST00000394440 MASP1P48740 699 aa13.8□□□□□ -0.2
CCT4-201ENST00000394440 EMX1Q04741 257 aaPredicted RBP13.8□□□□□ -0.2
CCT4-201ENST00000394440 ZSWIM7Q19AV6 140 aa13.8□□□□□ -0.2
CCT4-201ENST00000394440 WDR88Q6ZMY6 472 aa13.8□□□□□ -0.2
CCT4-201ENST00000394440 DBX2Q6ZNG2 339 aa13.8□□□□□ -0.2
CCT4-201ENST00000394440 PRSS48Q7RTY5 328 aa13.8□□□□□ -0.2
CCT4-201ENST00000394440 PIGXQ8TBF5 258 aa13.8□□□□□ -0.2
CCT4-201ENST00000394440 STT3BQ8TCJ2 826 aa13.8□□□□□ -0.2
CCT4-201ENST00000394440 MYCBPQ99417 103 aaPredicted RBP13.8□□□□□ -0.2
CCT4-201ENST00000394440 NUDT9Q9BW91 350 aa13.8□□□□□ -0.2
CCT4-201ENST00000394440 NXF5Q9H1B4 397 aaKnown RBP13.8□□□□□ -0.2
CCT4-201ENST00000394440 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.8□□□□□ -0.2
CCT4-201ENST00000394440 RGS10O43665 173 aa13.8□□□□□ -0.2
CCT4-201ENST00000394440 MT-ND2P03891 347 aa13.8□□□□□ -0.2
CCT4-201ENST00000394440 AVPR2P30518 371 aa13.8□□□□□ -0.2
CCT4-201ENST00000394440 SNRPGP62308 76 aaKnown RBP13.8□□□□□ -0.2
CCT4-201ENST00000394440 CDK5Q00535 292 aa13.8□□□□□ -0.2
CCT4-201ENST00000394440 TUBA3CQ13748 450 aa13.8□□□□□ -0.2
CCT4-201ENST00000394440 EBPQ15125 230 aaKnown RBP13.8□□□□□ -0.2
CCT4-201ENST00000394440 NKAIN1Q4KMZ8 207 aa13.8□□□□□ -0.2
CCT4-201ENST00000394440 TMEM201Q5SNT2 666 aa13.8□□□□□ -0.2
CCT4-201ENST00000394440 ZNF613Q6PF04 617 aa13.8□□□□□ -0.2
CCT4-201ENST00000394440 RASSF6Q6ZTQ3 369 aa13.8□□□□□ -0.2
CCT4-201ENST00000394440 NRMQ8IXM6 262 aa13.8□□□□□ -0.2
CCT4-201ENST00000394440 CMIPQ8IY22 773 aa13.8□□□□□ -0.2
CCT4-201ENST00000394440 PRSS58Q8IYP2 241 aa13.8□□□□□ -0.2
CCT4-201ENST00000394440 ZNF614Q8N883 585 aa13.8□□□□□ -0.2
CCT4-201ENST00000394440 FAR1Q8WVX9 515 aa13.8□□□□□ -0.2
CCT4-201ENST00000394440 OIT3Q8WWZ8 545 aa13.8□□□□□ -0.2
CCT4-201ENST00000394440 DAZLQ92904 295 aaKnown RBP13.8□□□□□ -0.2
CCT4-201ENST00000394440 NMD3Q96D46 503 aaKnown RBP13.8□□□□□ -0.2
CCT4-201ENST00000394440 RNF31Q96EP0 1072 aa13.8□□□□□ -0.2
CCT4-201ENST00000394440 FAM46AQ96IP4 442 aaKnown RBP13.8□□□□□ -0.2
CCT4-201ENST00000394440 ART5Q96L15 291 aa13.8□□□□□ -0.2
CCT4-201ENST00000394440 TSC22D3Q99576 134 aa13.8□□□□□ -0.2
CCT4-201ENST00000394440 PLA2G12AQ9BZM1 189 aa13.8□□□□□ -0.2
CCT4-201ENST00000394440 SLC7A5P2Q9GIP4 190 aa13.8□□□□□ -0.2
CCT4-201ENST00000394440 LHPPQ9H008 270 aa13.8□□□□□ -0.2
CCT4-201ENST00000394440 SLC25A19Q9HC21 320 aa13.8□□□□□ -0.2
CCT4-201ENST00000394440 CNIH4Q9P003 139 aa13.8□□□□□ -0.2
CCT4-201ENST00000394440 COMMD3-BMI1R4GMX3 469 aa13.8□□□□□ -0.2
CCT4-201ENST00000394440 FRG2CA6NGY1 282 aa13.79□□□□□ -0.2
CCT4-201ENST00000394440 PIP5K1CO60331 668 aa13.79□□□□□ -0.2
CCT4-201ENST00000394440 DCKP27707 260 aa13.79□□□□□ -0.2
CCT4-201ENST00000394440 SLC5A2P31639 672 aa13.79□□□□□ -0.2
CCT4-201ENST00000394440 TCEAL6Q6IPX3 200 aa13.79□□□□□ -0.2
CCT4-201ENST00000394440 AHSA2Q719I0 299 aa13.79□□□□□ -0.2
CCT4-201ENST00000394440 MRGPREQ86SM8 312 aa13.79□□□□□ -0.2
CCT4-201ENST00000394440 MEX3DQ86XN8 651 aaKnown RBP13.79□□□□□ -0.2
CCT4-201ENST00000394440 CLVS1Q8IUQ0 354 aaPredicted RBP13.79□□□□□ -0.2
CCT4-201ENST00000394440 ALDH16A1Q8IZ83 802 aa13.79□□□□□ -0.2
CCT4-201ENST00000394440 OR4C3Q8NH37 302 aa13.79□□□□□ -0.2
CCT4-201ENST00000394440 TCEAL3Q969E4 200 aa13.79□□□□□ -0.2
CCT4-201ENST00000394440 DOK1Q99704 481 aa13.79□□□□□ -0.2
CCT4-201ENST00000394440 ZNF559Q9BR84 538 aa13.79□□□□□ -0.2
CCT4-201ENST00000394440 APMAPQ9HDC9 416 aa13.79□□□□□ -0.2
CCT4-201ENST00000394440 OCIAD1Q9NX40 245 aa13.79□□□□□ -0.2
CCT4-201ENST00000394440 PTTG2Q9NZH5 202 aa13.79□□□□□ -0.2
CCT4-201ENST00000394440 ZNF223Q9UK11 482 aaPredicted RBP13.79□□□□□ -0.2
CCT4-201ENST00000394440 RALGAPA1Q6GYQ0 2036 aa13.79□□□□□ -0.2
CCT4-201ENST00000394440 A0A0B4J2E0 115 aa13.79□□□□□ -0.2
CCT4-201ENST00000394440 A0A1B0GX12 115 aa13.79□□□□□ -0.2
CCT4-201ENST00000394440 SH3D21A4FU49 640 aa13.79□□□□□ -0.2
CCT4-201ENST00000394440 CLCA1A8K7I4 914 aa13.79□□□□□ -0.2
CCT4-201ENST00000394440 IL33O95760 270 aa13.79□□□□□ -0.2
CCT4-201ENST00000394440 ZGLP1P0C6A0 271 aa13.79□□□□□ -0.2
CCT4-201ENST00000394440 FGF5P12034 268 aa13.79□□□□□ -0.2
CCT4-201ENST00000394440 PAX7P23759 505 aa13.79□□□□□ -0.2
CCT4-201ENST00000394440 ACVR2AP27037 513 aa13.79□□□□□ -0.2
CCT4-201ENST00000394440 GIPRP48546 466 aa13.79□□□□□ -0.2
CCT4-201ENST00000394440 ZFP36L1Q07352 338 aaKnown RBP13.79□□□□□ -0.2
CCT4-201ENST00000394440 LANCL3Q6ZV70 420 aa13.79□□□□□ -0.2
CCT4-201ENST00000394440 PTCHD4Q6ZW05 846 aa13.79□□□□□ -0.2
CCT4-201ENST00000394440 RRM2BQ7LG56 351 aa13.79□□□□□ -0.2
CCT4-201ENST00000394440 PPP1R3BQ86XI6 285 aa13.79□□□□□ -0.2
CCT4-201ENST00000394440 C9orf40Q8IXQ3 194 aa13.79□□□□□ -0.2
CCT4-201ENST00000394440 LSMEM1Q8N8F7 131 aa13.79□□□□□ -0.2
CCT4-201ENST00000394440 OR8D4Q8NGM9 314 aa13.79□□□□□ -0.2
CCT4-201ENST00000394440 ZNF420Q8TAQ5 688 aaPredicted RBP13.79□□□□□ -0.2
CCT4-201ENST00000394440 TRUB1Q8WWH5 349 aaKnown RBP13.79□□□□□ -0.2
CCT4-201ENST00000394440 GGHQ92820 318 aa13.79□□□□□ -0.2
CCT4-201ENST00000394440 FGF11Q92914 225 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms