RNA–Protein interactions for RNA: ENST00000378043.8

BEST1-201, Transcript of bestrophin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BEST1, Length 2,740 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-201ENST00000378043 CTBP2P56545 445 aa10.16□□□□□ -0.78
BEST1-201ENST00000378043 ID2Q02363 134 aa10.16□□□□□ -0.78
BEST1-201ENST00000378043 PLAURQ03405 335 aa10.16□□□□□ -0.78
BEST1-201ENST00000378043 CDK10Q15131 360 aa10.16□□□□□ -0.78
BEST1-201ENST00000378043 Q5BKY6 102 aa10.16□□□□□ -0.78
BEST1-201ENST00000378043 FHL5Q5TD97 284 aa10.16□□□□□ -0.78
BEST1-201ENST00000378043 LCN1P1Q5VSP4 162 aa10.16□□□□□ -0.78
BEST1-201ENST00000378043 NIPAL3Q6P499 406 aa10.16□□□□□ -0.78
BEST1-201ENST00000378043 TRILQ7L0X0 811 aa10.16□□□□□ -0.78
BEST1-201ENST00000378043 TMEFF1Q8IYR6 380 aa10.16□□□□□ -0.78
BEST1-201ENST00000378043 TOR1AIP2Q8NFQ8 470 aa10.16□□□□□ -0.78
BEST1-201ENST00000378043 BRIX1Q8TDN6 353 aaKnown RBP10.16□□□□□ -0.78
BEST1-201ENST00000378043 OR1E3Q8WZA6 343 aa10.16□□□□□ -0.78
BEST1-201ENST00000378043 KISS1RQ969F8 398 aaPredicted RBP10.16□□□□□ -0.78
BEST1-201ENST00000378043 OTULINQ96BN8 352 aa10.16□□□□□ -0.78
BEST1-201ENST00000378043 OR2M4Q96R27 311 aa10.16□□□□□ -0.78
BEST1-201ENST00000378043 KCNJ15Q99712 375 aa10.16□□□□□ -0.78
BEST1-201ENST00000378043 ZNF350Q9GZX5 532 aa10.16□□□□□ -0.78
BEST1-201ENST00000378043 SIDT1Q9NXL6 827 aaKnown RBP10.16□□□□□ -0.78
BEST1-201ENST00000378043 DAPP1Q9UN19 280 aa10.16□□□□□ -0.78
BEST1-201ENST00000378043 ZNF232Q9UNY5 417 aa10.16□□□□□ -0.78
BEST1-201ENST00000378043 CA5BQ9Y2D0 317 aa10.16□□□□□ -0.78
BEST1-201ENST00000378043 TBC1D3DA0A087WVF3 549 aa10.16□□□□□ -0.78
BEST1-201ENST00000378043 TBC1D3IA0A087WXS9 549 aa10.16□□□□□ -0.78
BEST1-201ENST00000378043 TBC1D3EA0A087X179 549 aa10.16□□□□□ -0.78
BEST1-201ENST00000378043 TTC36A6NLP5 189 aa10.16□□□□□ -0.78
BEST1-201ENST00000378043 C12orf71A8MTZ7 269 aa10.16□□□□□ -0.78
BEST1-201ENST00000378043 TBC1D3LB9A6J9 549 aa10.16□□□□□ -0.78
BEST1-201ENST00000378043 H0Y8X5 98 aa10.16□□□□□ -0.78
BEST1-201ENST00000378043 GTPBP1O00178 669 aaKnown RBP10.16□□□□□ -0.78
BEST1-201ENST00000378043 HRO43593 1189 aa10.16□□□□□ -0.78
BEST1-201ENST00000378043 HMGN1P05114 100 aa10.16□□□□□ -0.78
BEST1-201ENST00000378043 TBC1D3HP0C7X1 549 aa10.16□□□□□ -0.78
BEST1-201ENST00000378043 RPS4Y1P22090 263 aaKnown RBP10.16□□□□□ -0.78
BEST1-201ENST00000378043 MAP2K3P46734 347 aa10.16□□□□□ -0.78
BEST1-201ENST00000378043 MRPS15P82914 257 aaKnown RBP10.16□□□□□ -0.78
BEST1-201ENST00000378043 RGS1Q08116 209 aa10.16□□□□□ -0.78
BEST1-201ENST00000378043 RIN1Q13671 783 aa10.16□□□□□ -0.78
BEST1-201ENST00000378043 EXOSC6Q5RKV6 272 aaKnown RBP10.16□□□□□ -0.78
BEST1-201ENST00000378043 TBC1D3CQ6IPX1 549 aa10.16□□□□□ -0.78
BEST1-201ENST00000378043 SMARCD3Q6STE5 483 aa10.16□□□□□ -0.78
BEST1-201ENST00000378043 METAP1DQ6UB28 335 aaPredicted RBP10.16□□□□□ -0.78
BEST1-201ENST00000378043 PAMR1Q6UXH9 720 aa10.16□□□□□ -0.78
BEST1-201ENST00000378043 PRR23CQ6ZRP0 262 aa10.16□□□□□ -0.78
BEST1-201ENST00000378043 TBC1D3Q8IZP1 549 aaPredicted RBP10.16□□□□□ -0.78
BEST1-201ENST00000378043 TMEM99Q8N816 258 aa10.16□□□□□ -0.78
BEST1-201ENST00000378043 ART5Q96L15 291 aa10.16□□□□□ -0.78
BEST1-201ENST00000378043 TMEM43Q9BTV4 400 aa10.16□□□□□ -0.78
BEST1-201ENST00000378043 TEX12Q9BXU0 123 aa10.16□□□□□ -0.78
BEST1-201ENST00000378043 TRIM45Q9H8W5 580 aaPredicted RBP10.16□□□□□ -0.78
BEST1-201ENST00000378043 PAQR5Q9NXK6 330 aaPredicted RBP10.16□□□□□ -0.78
BEST1-201ENST00000378043 MRPS2Q9Y399 296 aaKnown RBP10.16□□□□□ -0.78
BEST1-201ENST00000378043 PCDHGB7Q9Y5F8 929 aa10.16□□□□□ -0.78
BEST1-201ENST00000378043 HEBP2Q9Y5Z4 205 aa10.16□□□□□ -0.78
BEST1-201ENST00000378043 LOC105369274A0A096LPK9 316 aa10.15□□□□□ -0.78
BEST1-201ENST00000378043 NPIPA5A0A0B4J1W7 369 aa10.15□□□□□ -0.78
BEST1-201ENST00000378043 LOC102723532A0A0G2JNH3 316 aa10.15□□□□□ -0.78
BEST1-201ENST00000378043 NPIPA7E9PJI5 369 aa10.15□□□□□ -0.78
BEST1-201ENST00000378043 PEX12O00623 359 aa10.15□□□□□ -0.78
BEST1-201ENST00000378043 THBS1P07996 1170 aa10.15□□□□□ -0.78
BEST1-201ENST00000378043 NPIPA8P0DM63 369 aa10.15□□□□□ -0.78
BEST1-201ENST00000378043 CPMP14384 443 aa10.15□□□□□ -0.78
BEST1-201ENST00000378043 ALAS2P22557 587 aa10.15□□□□□ -0.78
BEST1-201ENST00000378043 IL18Q14116 193 aa10.15□□□□□ -0.78
BEST1-201ENST00000378043 TMEM196Q5HYL7 178 aa10.15□□□□□ -0.78
BEST1-201ENST00000378043 MRPL2Q5T653 305 aaKnown RBP10.15□□□□□ -0.78
BEST1-201ENST00000378043 THSD4Q6ZMP0 1018 aa10.15□□□□□ -0.78
BEST1-201ENST00000378043 USP53Q70EK8 1073 aa10.15□□□□□ -0.78
BEST1-201ENST00000378043 PRSS41Q7RTY9 318 aa10.15□□□□□ -0.78
BEST1-201ENST00000378043 OR4N4Q8N0Y3 316 aa10.15□□□□□ -0.78
BEST1-201ENST00000378043 ACBD7Q8N6N7 88 aa10.15□□□□□ -0.78
BEST1-201ENST00000378043 DUSP18Q8NEJ0 188 aa10.15□□□□□ -0.78
BEST1-201ENST00000378043 ENKURQ8TC29 256 aa10.15□□□□□ -0.78
BEST1-201ENST00000378043 UBASH3BQ8TF42 649 aa10.15□□□□□ -0.78
BEST1-201ENST00000378043 PTP4A1Q93096 173 aa10.15□□□□□ -0.78
BEST1-201ENST00000378043 NACC2Q96BF6 587 aa10.15□□□□□ -0.78
BEST1-201ENST00000378043 ZC3HAV1LQ96H79 300 aaKnown RBP10.15□□□□□ -0.78
BEST1-201ENST00000378043 RIPOR3Q96MK2 946 aa10.15□□□□□ -0.78
BEST1-201ENST00000378043 TWSG1Q9GZX9 223 aa10.15□□□□□ -0.78
BEST1-201ENST00000378043 PIGUQ9H490 435 aa10.15□□□□□ -0.78
BEST1-201ENST00000378043 RBFOX1Q9NWB1 397 aaKnown RBP10.15□□□□□ -0.78
BEST1-201ENST00000378043 H2AFY2Q9P0M6 372 aaPredicted RBP10.15□□□□□ -0.78
BEST1-201ENST00000378043 C19orf53Q9UNZ5 99 aaPredicted RBP10.15□□□□□ -0.78
BEST1-201ENST00000378043 NOX1Q9Y5S8 564 aa10.15□□□□□ -0.78
BEST1-201ENST00000378043 KNL1Q8NG31 2342 aa10.15□□□□□ -0.78
BEST1-201ENST00000378043 TRAPPC13A5PLN9 417 aa10.15□□□□□ -0.78
BEST1-201ENST00000378043 ZNF860A6NHJ4 632 aa10.15□□□□□ -0.78
BEST1-201ENST00000378043 UNC119BA6NIH7 251 aa10.15□□□□□ -0.78
BEST1-201ENST00000378043 RNF13O43567 381 aa10.15□□□□□ -0.78
BEST1-201ENST00000378043 AGR2O95994 175 aa10.15□□□□□ -0.78
BEST1-201ENST00000378043 SLC35G6P0C7Q6 338 aa10.15□□□□□ -0.78
BEST1-201ENST00000378043 IL9P15248 144 aa10.15□□□□□ -0.78
BEST1-201ENST00000378043 ELK1P19419 428 aa10.15□□□□□ -0.78
BEST1-201ENST00000378043 GDI1P31150 447 aa10.15□□□□□ -0.78
BEST1-201ENST00000378043 MLLT3P42568 568 aaPredicted RBP10.15□□□□□ -0.78
BEST1-201ENST00000378043 CD83Q01151 205 aa10.15□□□□□ -0.78
BEST1-201ENST00000378043 TATDN3Q17R31 274 aa10.15□□□□□ -0.78
BEST1-201ENST00000378043 FCRL6Q6DN72 434 aa10.15□□□□□ -0.78
BEST1-201ENST00000378043 RD3Q7Z3Z2 195 aa10.15□□□□□ -0.78
BEST1-201ENST00000378043 ASCC1Q8N9N2 400 aaKnown RBP10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms