RNA–Protein interactions for RNA: ENST00000362455.1

RNU4-39P-201, Transcript of RNA, U4 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU4-39P, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-39P-201ENST00000362455 TRIP11Q15643 1979 aa4.76□□□□□ -1.65
RNU4-39P-201ENST00000362455 SPAG17Q6Q759 2223 aa4.76□□□□□ -1.65
RNU4-39P-201ENST00000362455 UNC79Q9P2D8 2635 aa4.76□□□□□ -1.65
RNU4-39P-201ENST00000362455 SCN1AP35498 2009 aa4.75□□□□□ -1.65
RNU4-39P-201ENST00000362455 TSC2P49815 1807 aa4.75□□□□□ -1.65
RNU4-39P-201ENST00000362455 ZNF233A6NK53 670 aa4.75□□□□□ -1.65
RNU4-39P-201ENST00000362455 A8MXQ7 604 aa4.75□□□□□ -1.65
RNU4-39P-201ENST00000362455 PRPSAP2O60256 369 aa4.75□□□□□ -1.65
RNU4-39P-201ENST00000362455 CEACAM4O75871 244 aa4.75□□□□□ -1.65
RNU4-39P-201ENST00000362455 NXPH2O95156 264 aa4.75□□□□□ -1.65
RNU4-39P-201ENST00000362455 RPLP0P05388 317 aaKnown RBP4.75□□□□□ -1.65
RNU4-39P-201ENST00000362455 CT45A8P0DMV1 189 aa4.75□□□□□ -1.65
RNU4-39P-201ENST00000362455 CT45A9P0DMV2 189 aa4.75□□□□□ -1.65
RNU4-39P-201ENST00000362455 CCDC130P13994 396 aa4.75□□□□□ -1.65
RNU4-39P-201ENST00000362455 HOXB6P17509 224 aaKnown RBP4.75□□□□□ -1.65
RNU4-39P-201ENST00000362455 IL10P22301 178 aa4.75□□□□□ -1.65
RNU4-39P-201ENST00000362455 RDXP35241 583 aaKnown RBP4.75□□□□□ -1.65
RNU4-39P-201ENST00000362455 MATKP42679 507 aa4.75□□□□□ -1.65
RNU4-39P-201ENST00000362455 RABIFP47224 123 aa4.75□□□□□ -1.65
RNU4-39P-201ENST00000362455 CASP4P49662 377 aa4.75□□□□□ -1.65
RNU4-39P-201ENST00000362455 HERV-K104P63124 156 aa4.75□□□□□ -1.65
RNU4-39P-201ENST00000362455 HEPACAMQ14CZ8 416 aa4.75□□□□□ -1.65
RNU4-39P-201ENST00000362455 CT45A2Q5DJT8 189 aa4.75□□□□□ -1.65
RNU4-39P-201ENST00000362455 CES4AQ5XG92 561 aa4.75□□□□□ -1.65
RNU4-39P-201ENST00000362455 CAPN13Q6MZZ7 669 aaPredicted RBP4.75□□□□□ -1.65
RNU4-39P-201ENST00000362455 MFSD7Q6UXD7 560 aa4.75□□□□□ -1.65
RNU4-39P-201ENST00000362455 Q71RC1 249 aaPredicted RBP4.75□□□□□ -1.65
RNU4-39P-201ENST00000362455 CACUL1Q86Y37 369 aa4.75□□□□□ -1.65
RNU4-39P-201ENST00000362455 WDR49Q8IV35 697 aa4.75□□□□□ -1.65
RNU4-39P-201ENST00000362455 C12orf29Q8N999 325 aa4.75□□□□□ -1.65
RNU4-39P-201ENST00000362455 TMEM186Q96B77 213 aa4.75□□□□□ -1.65
RNU4-39P-201ENST00000362455 ANKRD36BP1Q96IX9 119 aa4.75□□□□□ -1.65
RNU4-39P-201ENST00000362455 PIWIL1Q96J94 861 aaKnown RBP4.75□□□□□ -1.65
RNU4-39P-201ENST00000362455 CXorf58Q96LI9 332 aa4.75□□□□□ -1.65
RNU4-39P-201ENST00000362455 ZNF300Q96RE9 604 aaPredicted RBP4.75□□□□□ -1.65
RNU4-39P-201ENST00000362455 AGPAT1Q99943 283 aa4.75□□□□□ -1.65
RNU4-39P-201ENST00000362455 BBS2Q9BXC9 721 aa4.75□□□□□ -1.65
RNU4-39P-201ENST00000362455 ELOVL4Q9GZR5 314 aa4.75□□□□□ -1.65
RNU4-39P-201ENST00000362455 MTHFD2LQ9H903 347 aaPredicted RBP4.75□□□□□ -1.65
RNU4-39P-201ENST00000362455 CSNK1G1Q9HCP0 422 aa4.75□□□□□ -1.65
RNU4-39P-201ENST00000362455 DDX28Q9NUL7 540 aaKnown RBP4.75□□□□□ -1.65
RNU4-39P-201ENST00000362455 ACOXLQ9NUZ1 547 aa4.75□□□□□ -1.65
RNU4-39P-201ENST00000362455 KLHL8Q9P2G9 620 aaPredicted RBP4.75□□□□□ -1.65
RNU4-39P-201ENST00000362455 THAP10Q9P2Z0 257 aaPredicted RBP4.75□□□□□ -1.65
RNU4-39P-201ENST00000362455 SPASTQ9UBP0 616 aa4.75□□□□□ -1.65
RNU4-39P-201ENST00000362455 CACNG5Q9UF02 275 aa4.75□□□□□ -1.65
RNU4-39P-201ENST00000362455 KCNN3Q9UGI6 736 aa4.75□□□□□ -1.65
RNU4-39P-201ENST00000362455 LNPEPQ9UIQ6 1025 aa4.75□□□□□ -1.65
RNU4-39P-201ENST00000362455 DNPEPQ9ULA0 475 aa4.75□□□□□ -1.65
RNU4-39P-201ENST00000362455 GAB2Q9UQC2 676 aa4.75□□□□□ -1.65
RNU4-39P-201ENST00000362455 CSNK1G3Q9Y6M4 447 aa4.75□□□□□ -1.65
RNU4-39P-201ENST00000362455 ATMQ13315 3056 aa4.75□□□□□ -1.65
RNU4-39P-201ENST00000362455 MEI4A8MW99 385 aa4.74□□□□□ -1.65
RNU4-39P-201ENST00000362455 NPIPB9F8W1W9 429 aa4.74□□□□□ -1.65
RNU4-39P-201ENST00000362455 TLX2O43763 284 aaPredicted RBP4.74□□□□□ -1.65
RNU4-39P-201ENST00000362455 ANGPTL1O95841 491 aa4.74□□□□□ -1.65
RNU4-39P-201ENST00000362455 TNNC2P02585 160 aa4.74□□□□□ -1.65
RNU4-39P-201ENST00000362455 IGHV4-34P06331 123 aa4.74□□□□□ -1.65
RNU4-39P-201ENST00000362455 SFTPBP07988 381 aa4.74□□□□□ -1.65
RNU4-39P-201ENST00000362455 HLA-EP13747 358 aa4.74□□□□□ -1.65
RNU4-39P-201ENST00000362455 GNSP15586 552 aa4.74□□□□□ -1.65
RNU4-39P-201ENST00000362455 ZNF26P17031 533 aaPredicted RBP4.74□□□□□ -1.65
RNU4-39P-201ENST00000362455 CASP1P29466 404 aa4.74□□□□□ -1.65
RNU4-39P-201ENST00000362455 GPR183P32249 361 aa4.74□□□□□ -1.65
RNU4-39P-201ENST00000362455 SLC6A12P48065 614 aa4.74□□□□□ -1.65
RNU4-39P-201ENST00000362455 CLK1P49759 484 aaKnown RBP4.74□□□□□ -1.65
RNU4-39P-201ENST00000362455 MAP3K7CLP57077 242 aa4.74□□□□□ -1.65
RNU4-39P-201ENST00000362455 IL9RQ01113 521 aa4.74□□□□□ -1.65
RNU4-39P-201ENST00000362455 CYP24A1Q07973 514 aa4.74□□□□□ -1.65
RNU4-39P-201ENST00000362455 MFGE8Q08431 387 aaPredicted RBP4.74□□□□□ -1.65
RNU4-39P-201ENST00000362455 DNAJC3Q13217 504 aa4.74□□□□□ -1.65
RNU4-39P-201ENST00000362455 MEF2DQ14814 521 aa4.74□□□□□ -1.65
RNU4-39P-201ENST00000362455 SNRNP35Q16560 246 aaKnown RBP4.74□□□□□ -1.65
RNU4-39P-201ENST00000362455 TMEM30BQ3MIR4 351 aa4.74□□□□□ -1.65
RNU4-39P-201ENST00000362455 TOR1AIP1Q5JTV8 583 aa4.74□□□□□ -1.65
RNU4-39P-201ENST00000362455 C1orf220Q5T0J3 134 aa4.74□□□□□ -1.65
RNU4-39P-201ENST00000362455 NEK5Q6P3R8 708 aa4.74□□□□□ -1.65
RNU4-39P-201ENST00000362455 CLEC20AQ6ZU45 233 aa4.74□□□□□ -1.65
RNU4-39P-201ENST00000362455 ZER1Q7Z7L7 766 aa4.74□□□□□ -1.65
RNU4-39P-201ENST00000362455 ACOT1Q86TX2 421 aa4.74□□□□□ -1.65
RNU4-39P-201ENST00000362455 OR5M9Q8NGP3 310 aa4.74□□□□□ -1.65
RNU4-39P-201ENST00000362455 OR4L1Q8NH43 312 aa4.74□□□□□ -1.65
RNU4-39P-201ENST00000362455 SLC2A14Q8TDB8 520 aa4.74□□□□□ -1.65
RNU4-39P-201ENST00000362455 SCFD1Q8WVM8 642 aa4.74□□□□□ -1.65
RNU4-39P-201ENST00000362455 CCDC127Q96BQ5 260 aa4.74□□□□□ -1.65
RNU4-39P-201ENST00000362455 MRPL53Q96EL3 112 aaKnown RBP4.74□□□□□ -1.65
RNU4-39P-201ENST00000362455 HSD3B7Q9H2F3 369 aa4.74□□□□□ -1.65
RNU4-39P-201ENST00000362455 TM9SF3Q9HD45 589 aa4.74□□□□□ -1.65
RNU4-39P-201ENST00000362455 DMAP1Q9NPF5 467 aaPredicted RBP4.74□□□□□ -1.65
RNU4-39P-201ENST00000362455 AGPAT3Q9NRZ7 376 aa4.74□□□□□ -1.65
RNU4-39P-201ENST00000362455 ELOVL2Q9NXB9 296 aa4.74□□□□□ -1.65
RNU4-39P-201ENST00000362455 HOOK1Q9UJC3 728 aaKnown RBP4.74□□□□□ -1.65
RNU4-39P-201ENST00000362455 NUP210Q8TEM1 1887 aaPredicted RBP4.74□□□□□ -1.65
RNU4-39P-201ENST00000362455 PTPRQQ9UMZ3 2332 aa4.74□□□□□ -1.65
RNU4-39P-201ENST00000362455 RALGAPA1Q6GYQ0 2036 aa4.73□□□□□ -1.65
RNU4-39P-201ENST00000362455 CABIN1Q9Y6J0 2220 aa4.73□□□□□ -1.65
RNU4-39P-201ENST00000362455 CFAP73A6NFT4 308 aa4.73□□□□□ -1.65
RNU4-39P-201ENST00000362455 ARHGAP42A6NI28 874 aa4.73□□□□□ -1.65
RNU4-39P-201ENST00000362455 LRRIQ3A6PVS8 624 aaPredicted RBP4.73□□□□□ -1.65
RNU4-39P-201ENST00000362455 H3BQV1 296 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms