RNA–Protein interactions for RNA: ENST00000360718.5

SQSTM1-201, Transcript of sequestosome 1, humanhuman

TSL 1 (best) BASIC

Gene SQSTM1, Length 2,253 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-201ENST00000360718 KCND3Q9UK17 655 aa12.23□□□□□ -0.45
SQSTM1-201ENST00000360718 MGAT4BQ9UQ53 548 aa12.23□□□□□ -0.45
SQSTM1-201ENST00000360718 DMXL1Q9Y485 3027 aa12.23□□□□□ -0.45
SQSTM1-201ENST00000360718 A0A075B6Q4 140 aa12.22□□□□□ -0.45
SQSTM1-201ENST00000360718 HMGN4O00479 90 aa12.22□□□□□ -0.45
SQSTM1-201ENST00000360718 ASNA1O43681 348 aa12.22□□□□□ -0.45
SQSTM1-201ENST00000360718 KIAA0513O60268 411 aa12.22□□□□□ -0.45
SQSTM1-201ENST00000360718 OR12D1P0DN82 309 aa12.22□□□□□ -0.45
SQSTM1-201ENST00000360718 OSMP13725 252 aa12.22□□□□□ -0.45
SQSTM1-201ENST00000360718 TPTEP56180 551 aa12.22□□□□□ -0.45
SQSTM1-201ENST00000360718 SNRPGP62308 76 aaKnown RBP12.22□□□□□ -0.45
SQSTM1-201ENST00000360718 TSTQ16762 297 aaKnown RBP12.22□□□□□ -0.45
SQSTM1-201ENST00000360718 CYP27C1Q4G0S4 372 aa12.22□□□□□ -0.45
SQSTM1-201ENST00000360718 XAGE5Q8WWM1 108 aa12.22□□□□□ -0.45
SQSTM1-201ENST00000360718 RASSF5Q8WWW0 418 aa12.22□□□□□ -0.45
SQSTM1-201ENST00000360718 OR1F2PQ96R84 312 aa12.22□□□□□ -0.45
SQSTM1-201ENST00000360718 ACTRT3Q9BYD9 372 aa12.22□□□□□ -0.45
SQSTM1-201ENST00000360718 UCK2Q9BZX2 261 aa12.22□□□□□ -0.45
SQSTM1-201ENST00000360718 EQTNQ9NQ60 294 aa12.22□□□□□ -0.45
SQSTM1-201ENST00000360718 OCIAD1Q9NX40 245 aa12.22□□□□□ -0.45
SQSTM1-201ENST00000360718 NTMQ9P121 344 aa12.22□□□□□ -0.45
SQSTM1-201ENST00000360718 ZNF232Q9UNY5 417 aa12.22□□□□□ -0.45
SQSTM1-201ENST00000360718 PCDHGB6Q9Y5F9 930 aa12.22□□□□□ -0.45
SQSTM1-201ENST00000360718 CLDN16Q9Y5I7 305 aa12.22□□□□□ -0.45
SQSTM1-201ENST00000360718 A0A087WV62 115 aa12.22□□□□□ -0.45
SQSTM1-201ENST00000360718 DUXAA6NLW8 204 aa12.22□□□□□ -0.45
SQSTM1-201ENST00000360718 BCHEP06276 602 aa12.22□□□□□ -0.45
SQSTM1-201ENST00000360718 IFI6P09912 130 aa12.22□□□□□ -0.45
SQSTM1-201ENST00000360718 NR2F1P10589 423 aa12.22□□□□□ -0.45
SQSTM1-201ENST00000360718 POU1F1P28069 291 aa12.22□□□□□ -0.45
SQSTM1-201ENST00000360718 PCYT1AP49585 367 aa12.22□□□□□ -0.45
SQSTM1-201ENST00000360718 RHAGQ02094 409 aa12.22□□□□□ -0.45
SQSTM1-201ENST00000360718 SELENBP1Q13228 472 aa12.22□□□□□ -0.45
SQSTM1-201ENST00000360718 ILKQ13418 452 aa12.22□□□□□ -0.45
SQSTM1-201ENST00000360718 DSG2Q14126 1118 aa12.22□□□□□ -0.45
SQSTM1-201ENST00000360718 NCF4Q15080 339 aa12.22□□□□□ -0.45
SQSTM1-201ENST00000360718 ZNF628Q5EBL2 1059 aa12.22□□□□□ -0.45
SQSTM1-201ENST00000360718 ATAD3BQ5T9A4 648 aa12.22□□□□□ -0.45
SQSTM1-201ENST00000360718 BPHLQ86WA6 291 aaPredicted RBP12.22□□□□□ -0.45
SQSTM1-201ENST00000360718 NAXDQ8IW45 347 aa12.22□□□□□ -0.45
SQSTM1-201ENST00000360718 SLC38A9Q8NBW4 561 aa12.22□□□□□ -0.45
SQSTM1-201ENST00000360718 C7orf57Q8NEG2 295 aa12.22□□□□□ -0.45
SQSTM1-201ENST00000360718 OR7G2Q8NG99 324 aa12.22□□□□□ -0.45
SQSTM1-201ENST00000360718 SLC38A5Q8WUX1 472 aa12.22□□□□□ -0.45
SQSTM1-201ENST00000360718 PRRX2Q99811 253 aa12.22□□□□□ -0.45
SQSTM1-201ENST00000360718 CCDC32Q9BV29 185 aa12.22□□□□□ -0.45
SQSTM1-201ENST00000360718 SIAEQ9HAT2 523 aa12.22□□□□□ -0.45
SQSTM1-201ENST00000360718 APMAPQ9HDC9 416 aa12.22□□□□□ -0.45
SQSTM1-201ENST00000360718 TMEM9BQ9NQ34 198 aa12.22□□□□□ -0.45
SQSTM1-201ENST00000360718 SLC28A2O43868 658 aa12.21□□□□□ -0.45
SQSTM1-201ENST00000360718 AGR2O95994 175 aa12.21□□□□□ -0.45
SQSTM1-201ENST00000360718 HBQ1P09105 142 aa12.21□□□□□ -0.45
SQSTM1-201ENST00000360718 GTF2E2P29084 291 aaKnown RBP12.21□□□□□ -0.45
SQSTM1-201ENST00000360718 SLC15A1P46059 708 aa12.21□□□□□ -0.45
SQSTM1-201ENST00000360718 BTG2P78543 158 aa12.21□□□□□ -0.45
SQSTM1-201ENST00000360718 ZFP36L1Q07352 338 aaKnown RBP12.21□□□□□ -0.45
SQSTM1-201ENST00000360718 SERTAD2Q14140 314 aa12.21□□□□□ -0.45
SQSTM1-201ENST00000360718 DUSP7Q16829 419 aa12.21□□□□□ -0.45
SQSTM1-201ENST00000360718 DCST1Q5T197 706 aa12.21□□□□□ -0.45
SQSTM1-201ENST00000360718 MFSD4BQ5TF39 518 aa12.21□□□□□ -0.45
SQSTM1-201ENST00000360718 ARHGAP40Q5TG30 622 aa12.21□□□□□ -0.45
SQSTM1-201ENST00000360718 C1orf189Q5VU69 101 aa12.21□□□□□ -0.45
SQSTM1-201ENST00000360718 ZNF770Q6IQ21 691 aaPredicted RBP12.21□□□□□ -0.45
SQSTM1-201ENST00000360718 DGAT2L6Q6ZPD8 337 aa12.21□□□□□ -0.45
SQSTM1-201ENST00000360718 OR2L13Q8N349 312 aa12.21□□□□□ -0.45
SQSTM1-201ENST00000360718 AGBL5Q8NDL9 886 aa12.21□□□□□ -0.45
SQSTM1-201ENST00000360718 OR5D16Q8NGK9 328 aa12.21□□□□□ -0.45
SQSTM1-201ENST00000360718 ADAMTS15Q8TE58 950 aa12.21□□□□□ -0.45
SQSTM1-201ENST00000360718 DGAT2Q96PD7 388 aa12.21□□□□□ -0.45
SQSTM1-201ENST00000360718 PELOQ9BRX2 385 aaKnown RBP12.21□□□□□ -0.45
SQSTM1-201ENST00000360718 YIPF4Q9BSR8 244 aa12.21□□□□□ -0.45
SQSTM1-201ENST00000360718 MMACHCQ9Y4U1 282 aa12.21□□□□□ -0.45
SQSTM1-201ENST00000360718 ZNF292O60281 2723 aa12.21□□□□□ -0.45
SQSTM1-201ENST00000360718 C4orf47A7E2U8 309 aa12.21□□□□□ -0.46
SQSTM1-201ENST00000360718 FAAHO00519 579 aa12.21□□□□□ -0.46
SQSTM1-201ENST00000360718 PLOD3O60568 738 aa12.21□□□□□ -0.46
SQSTM1-201ENST00000360718 SCRG1O75711 98 aa12.21□□□□□ -0.46
SQSTM1-201ENST00000360718 EFNA3P52797 238 aa12.21□□□□□ -0.46
SQSTM1-201ENST00000360718 CLDN6P56747 220 aa12.21□□□□□ -0.46
SQSTM1-201ENST00000360718 KCNJ8Q15842 424 aa12.21□□□□□ -0.46
SQSTM1-201ENST00000360718 PRICKLE4Q2TBC4 344 aa12.21□□□□□ -0.46
SQSTM1-201ENST00000360718 RHBDD2Q6NTF9 364 aa12.21□□□□□ -0.46
SQSTM1-201ENST00000360718 TMEM53Q6P2H8 277 aa12.21□□□□□ -0.46
SQSTM1-201ENST00000360718 FAM111BQ6SJ93 734 aa12.21□□□□□ -0.46
SQSTM1-201ENST00000360718 CASP12Q6UXS9 341 aa12.21□□□□□ -0.46
SQSTM1-201ENST00000360718 CCDC190Q86UF4 302 aa12.21□□□□□ -0.46
SQSTM1-201ENST00000360718 PPP1R3BQ86XI6 285 aa12.21□□□□□ -0.46
SQSTM1-201ENST00000360718 TMEM151BQ8IW70 566 aa12.21□□□□□ -0.46
SQSTM1-201ENST00000360718 CYP4Z2PQ8N1L4 340 aa12.21□□□□□ -0.46
SQSTM1-201ENST00000360718 FAM83FQ8NEG4 500 aaPredicted RBP12.21□□□□□ -0.46
SQSTM1-201ENST00000360718 CHAC2Q8WUX2 184 aa12.21□□□□□ -0.46
SQSTM1-201ENST00000360718 RIT1Q92963 219 aa12.21□□□□□ -0.46
SQSTM1-201ENST00000360718 CLIP3Q96DZ5 547 aa12.21□□□□□ -0.46
SQSTM1-201ENST00000360718 OTUB1Q96FW1 271 aaPredicted RBP12.21□□□□□ -0.46
SQSTM1-201ENST00000360718 TMEM80Q96HE8 168 aa12.21□□□□□ -0.46
SQSTM1-201ENST00000360718 TMEM19Q96HH6 336 aa12.21□□□□□ -0.46
SQSTM1-201ENST00000360718 OR7D2Q96RA2 312 aa12.21□□□□□ -0.46
SQSTM1-201ENST00000360718 OR5M11Q96RB7 305 aa12.21□□□□□ -0.46
SQSTM1-201ENST00000360718 ZNF607Q96SK3 696 aa12.21□□□□□ -0.46
SQSTM1-201ENST00000360718 RNF167Q9H6Y7 350 aa12.21□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms