RNA–Protein interactions for RNA: ENST00000358511.10

COL6A6-201, Transcript of collagen type VI alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL6A6, Length 9,581 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-201ENST00000358511 TMEM82A0PJX8 343 aa8.29□□□□□ -1.08
COL6A6-201ENST00000358511 H7C1Q1 480 aa8.29□□□□□ -1.08
COL6A6-201ENST00000358511 SRPX2O60687 465 aaPredicted RBP8.29□□□□□ -1.08
COL6A6-201ENST00000358511 SYPP08247 313 aa8.29□□□□□ -1.08
COL6A6-201ENST00000358511 NKX3-2P78367 333 aa8.29□□□□□ -1.08
COL6A6-201ENST00000358511 TIGD5Q53EQ6 642 aa8.29□□□□□ -1.08
COL6A6-201ENST00000358511 TOR2AQ5JU69 321 aa8.29□□□□□ -1.08
COL6A6-201ENST00000358511 IL17RDQ8NFM7 739 aa8.29□□□□□ -1.08
COL6A6-201ENST00000358511 RCE1Q9Y256 329 aa8.29□□□□□ -1.08
COL6A6-201ENST00000358511 BHLHE40O14503 412 aa8.29□□□□□ -1.08
COL6A6-201ENST00000358511 LDB2O43679 373 aa8.29□□□□□ -1.08
COL6A6-201ENST00000358511 ATG12O94817 140 aa8.29□□□□□ -1.08
COL6A6-201ENST00000358511 PRKAR1BP31321 381 aa8.29□□□□□ -1.08
COL6A6-201ENST00000358511 HTR4Q13639 388 aa8.29□□□□□ -1.08
COL6A6-201ENST00000358511 ACSM3Q53FZ2 586 aa8.29□□□□□ -1.08
COL6A6-201ENST00000358511 C3orf38Q5JPI3 329 aa8.29□□□□□ -1.08
COL6A6-201ENST00000358511 KDELC1Q6UW63 502 aa8.29□□□□□ -1.08
COL6A6-201ENST00000358511 UNC5DQ6UXZ4 953 aa8.29□□□□□ -1.08
COL6A6-201ENST00000358511 CLECL1Q8IZS7 167 aa8.29□□□□□ -1.08
COL6A6-201ENST00000358511 WDTC1Q8N5D0 677 aa8.29□□□□□ -1.08
COL6A6-201ENST00000358511 OR2T4Q8NH00 348 aa8.29□□□□□ -1.08
COL6A6-201ENST00000358511 HRASLS5Q96KN8 279 aa8.29□□□□□ -1.08
COL6A6-201ENST00000358511 RBP7Q96R05 134 aa8.29□□□□□ -1.08
COL6A6-201ENST00000358511 CLMPQ9H6B4 373 aa8.29□□□□□ -1.08
COL6A6-201ENST00000358511 HMX1Q9NP08 348 aaPredicted RBP8.29□□□□□ -1.08
COL6A6-201ENST00000358511 B3GAT2Q9NPZ5 323 aa8.29□□□□□ -1.08
COL6A6-201ENST00000358511 GPRC5BQ9NZH0 403 aa8.29□□□□□ -1.08
COL6A6-201ENST00000358511 A0A0D9SEW6 157 aa8.29□□□□□ -1.08
COL6A6-201ENST00000358511 AK1P00568 194 aa8.29□□□□□ -1.08
COL6A6-201ENST00000358511 RHOP08100 348 aa8.29□□□□□ -1.08
COL6A6-201ENST00000358511 PREPP48147 710 aa8.29□□□□□ -1.08
COL6A6-201ENST00000358511 PRPS1P60891 318 aa8.29□□□□□ -1.08
COL6A6-201ENST00000358511 SOHLH1Q5JUK2 328 aa8.29□□□□□ -1.08
COL6A6-201ENST00000358511 PSRC1Q6PGN9 363 aaPredicted RBP8.29□□□□□ -1.08
COL6A6-201ENST00000358511 SLAIN1Q8ND83 568 aa8.29□□□□□ -1.08
COL6A6-201ENST00000358511 OR4E2Q8NGC2 313 aa8.29□□□□□ -1.08
COL6A6-201ENST00000358511 MARC2Q969Z3 335 aa8.29□□□□□ -1.08
COL6A6-201ENST00000358511 ZNF778Q96MU6 729 aa8.29□□□□□ -1.08
COL6A6-201ENST00000358511 TMEM121BQ9BXQ6 578 aaPredicted RBP8.29□□□□□ -1.08
COL6A6-201ENST00000358511 PITHD1Q9GZP4 211 aaPredicted RBP8.29□□□□□ -1.08
COL6A6-201ENST00000358511 TSPAN10Q9H1Z9 355 aaPredicted RBP8.29□□□□□ -1.08
COL6A6-201ENST00000358511 LDAHQ9H6V9 325 aa8.29□□□□□ -1.08
COL6A6-201ENST00000358511 ALDOCP09972 364 aaKnown RBP8.28□□□□□ -1.08
COL6A6-201ENST00000358511 DRD2P14416 443 aa8.28□□□□□ -1.08
COL6A6-201ENST00000358511 GPR50Q13585 617 aa8.28□□□□□ -1.08
COL6A6-201ENST00000358511 C17orf107Q6ZR85 190 aa8.28□□□□□ -1.08
COL6A6-201ENST00000358511 HIST2H3AQ71DI3 136 aa8.28□□□□□ -1.08
COL6A6-201ENST00000358511 NPWQ8N729 165 aa8.28□□□□□ -1.08
COL6A6-201ENST00000358511 TFGQ92734 400 aaPredicted RBP8.28□□□□□ -1.08
COL6A6-201ENST00000358511 ZBTB8AQ96BR9 441 aa8.28□□□□□ -1.08
COL6A6-201ENST00000358511 C14orf79Q96F83 325 aa8.28□□□□□ -1.08
COL6A6-201ENST00000358511 SUSD3Q96L08 255 aa8.28□□□□□ -1.08
COL6A6-201ENST00000358511 OSGIN1Q9UJX0 560 aa8.28□□□□□ -1.08
COL6A6-201ENST00000358511 MANSC4A6NHS7 340 aaPredicted RBP8.28□□□□□ -1.08
COL6A6-201ENST00000358511 RPS17P08708 135 aaKnown RBP8.28□□□□□ -1.08
COL6A6-201ENST00000358511 ELK1P19419 428 aa8.28□□□□□ -1.08
COL6A6-201ENST00000358511 CDK3Q00526 305 aa8.28□□□□□ -1.08
COL6A6-201ENST00000358511 ATPAF1Q5TC12 328 aaPredicted RBP8.28□□□□□ -1.08
COL6A6-201ENST00000358511 EID2Q8N6I1 236 aa8.28□□□□□ -1.08
COL6A6-201ENST00000358511 GPR150Q8NGU9 434 aa8.28□□□□□ -1.08
COL6A6-201ENST00000358511 C4orf36Q96KX1 117 aa8.28□□□□□ -1.08
COL6A6-201ENST00000358511 LMF1Q96S06 567 aa8.28□□□□□ -1.08
COL6A6-201ENST00000358511 TMEM39AQ9NV64 488 aa8.28□□□□□ -1.08
COL6A6-201ENST00000358511 CACNA1IQ9P0X4 2223 aa8.28□□□□□ -1.08
COL6A6-201ENST00000358511 ZNF623O75123 536 aa8.28□□□□□ -1.08
COL6A6-201ENST00000358511 EOMESO95936 686 aa8.28□□□□□ -1.08
COL6A6-201ENST00000358511 APODP05090 189 aa8.28□□□□□ -1.08
COL6A6-201ENST00000358511 MBTPS1Q14703 1052 aa8.28□□□□□ -1.08
COL6A6-201ENST00000358511 C15orf39Q6ZRI6 1047 aa8.28□□□□□ -1.08
COL6A6-201ENST00000358511 ARHGAP12Q8IWW6 846 aa8.28□□□□□ -1.08
COL6A6-201ENST00000358511 UMODL1-AS1Q8N2C9 162 aa8.28□□□□□ -1.08
COL6A6-201ENST00000358511 FBXO22Q8NEZ5 403 aa8.28□□□□□ -1.08
COL6A6-201ENST00000358511 SAT2Q96F10 170 aaPredicted RBP8.28□□□□□ -1.08
COL6A6-201ENST00000358511 PRRC1Q96M27 445 aa8.28□□□□□ -1.08
COL6A6-201ENST00000358511 IL21RQ9HBE5 538 aa8.28□□□□□ -1.08
COL6A6-201ENST00000358511 HIF1ANQ9NWT6 349 aa8.28□□□□□ -1.08
COL6A6-201ENST00000358511 ASB6Q9NWX5 421 aa8.28□□□□□ -1.08
COL6A6-201ENST00000358511 TNFRSF10BO14763 440 aa8.28□□□□□ -1.08
COL6A6-201ENST00000358511 KCNE1P15382 129 aa8.28□□□□□ -1.08
COL6A6-201ENST00000358511 RACK1P63244 317 aaKnown RBP8.28□□□□□ -1.08
COL6A6-201ENST00000358511 SORDQ00796 357 aa8.28□□□□□ -1.08
COL6A6-201ENST00000358511 CLPPQ16740 277 aaPredicted RBP8.28□□□□□ -1.08
COL6A6-201ENST00000358511 PRAMEF19Q5SWL8 479 aa8.28□□□□□ -1.08
COL6A6-201ENST00000358511 C1orf220Q5T0J3 134 aa8.28□□□□□ -1.08
COL6A6-201ENST00000358511 H3F3CQ6NXT2 135 aa8.28□□□□□ -1.08
COL6A6-201ENST00000358511 CCDC116Q8IYX3 515 aa8.28□□□□□ -1.08
COL6A6-201ENST00000358511 ZNF461Q8TAF7 563 aa8.28□□□□□ -1.08
COL6A6-201ENST00000358511 GPR148Q8TDV2 347 aa8.28□□□□□ -1.08
COL6A6-201ENST00000358511 DCLRE1CQ96SD1 692 aaKnown RBP8.28□□□□□ -1.08
COL6A6-201ENST00000358511 WIF1Q9Y5W5 379 aa8.28□□□□□ -1.08
COL6A6-201ENST00000358511 FAM72CH0Y354 149 aa8.28□□□□□ -1.08
COL6A6-201ENST00000358511 IMPA2O14732 288 aa8.28□□□□□ -1.08
COL6A6-201ENST00000358511 KNG1P01042 644 aa8.28□□□□□ -1.08
COL6A6-201ENST00000358511 HRGP04196 525 aa8.28□□□□□ -1.08
COL6A6-201ENST00000358511 GKP32189 559 aa8.28□□□□□ -1.08
COL6A6-201ENST00000358511 FOXA1P55317 472 aa8.28□□□□□ -1.08
COL6A6-201ENST00000358511 ERVK-21P61565 698 aa8.28□□□□□ -1.08
COL6A6-201ENST00000358511 FAM72AQ5TYM5 149 aa8.28□□□□□ -1.08
COL6A6-201ENST00000358511 FAM72DQ6L9T8 149 aa8.28□□□□□ -1.08
COL6A6-201ENST00000358511 COMMD6Q7Z4G1 85 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms