RNA–Protein interactions for RNA: ENST00000355766.5

VPS13A-201, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 3

Gene VPS13A, Length 753 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-201ENST00000355766 PSPHP78330 225 aa6.43□□□□□ -1.38
VPS13A-201ENST00000355766 HSD11B2P80365 405 aa6.43□□□□□ -1.38
VPS13A-201ENST00000355766 CHRNB3Q05901 458 aa6.43□□□□□ -1.38
VPS13A-201ENST00000355766 SLAMF1Q13291 335 aa6.43□□□□□ -1.38
VPS13A-201ENST00000355766 SELPLGQ14242 412 aa6.43□□□□□ -1.38
VPS13A-201ENST00000355766 TRIP10Q15642 601 aa6.43□□□□□ -1.38
VPS13A-201ENST00000355766 GPR19Q15760 415 aa6.43□□□□□ -1.38
VPS13A-201ENST00000355766 ADRM1Q16186 407 aa6.43□□□□□ -1.38
VPS13A-201ENST00000355766 MPEG1Q2M385 716 aa6.43□□□□□ -1.38
VPS13A-201ENST00000355766 TMTC4Q5T4D3 741 aa6.43□□□□□ -1.38
VPS13A-201ENST00000355766 B3GNTL1Q67FW5 361 aaPredicted RBP6.43□□□□□ -1.38
VPS13A-201ENST00000355766 MTFR2Q6P444 385 aa6.43□□□□□ -1.38
VPS13A-201ENST00000355766 ZCCHC12Q6PEW1 402 aa6.43□□□□□ -1.38
VPS13A-201ENST00000355766 FAM180AQ6UWF9 173 aa6.43□□□□□ -1.38
VPS13A-201ENST00000355766 PIWIL3Q7Z3Z3 882 aaKnown RBP6.43□□□□□ -1.38
VPS13A-201ENST00000355766 PATL1Q86TB9 770 aaKnown RBP6.43□□□□□ -1.38
VPS13A-201ENST00000355766 PLD3Q8IV08 490 aa6.43□□□□□ -1.38
VPS13A-201ENST00000355766 ZC3H7AQ8IWR0 971 aaKnown RBP6.43□□□□□ -1.38
VPS13A-201ENST00000355766 ZZZ3Q8IYH5 903 aa6.43□□□□□ -1.38
VPS13A-201ENST00000355766 CLECL1Q8IZS7 167 aa6.43□□□□□ -1.38
VPS13A-201ENST00000355766 Q8N1X5 172 aa6.43□□□□□ -1.38
VPS13A-201ENST00000355766 LRRC25Q8N386 305 aaPredicted RBP6.43□□□□□ -1.38
VPS13A-201ENST00000355766 SVOPLQ8N434 492 aa6.43□□□□□ -1.38
VPS13A-201ENST00000355766 D2HGDHQ8N465 521 aa6.43□□□□□ -1.38
VPS13A-201ENST00000355766 DNAJC22Q8N4W6 341 aa6.43□□□□□ -1.38
VPS13A-201ENST00000355766 FAM156AQ8NDB6 213 aa6.43□□□□□ -1.38
VPS13A-201ENST00000355766 NUDT10Q8NFP7 164 aa6.43□□□□□ -1.38
VPS13A-201ENST00000355766 CDC26Q8NHZ8 85 aa6.43□□□□□ -1.38
VPS13A-201ENST00000355766 ZNF675Q8TD23 568 aa6.43□□□□□ -1.38
VPS13A-201ENST00000355766 CANT1Q8WVQ1 401 aa6.43□□□□□ -1.38
VPS13A-201ENST00000355766 OIT3Q8WWZ8 545 aa6.43□□□□□ -1.38
VPS13A-201ENST00000355766 LZICQ8WZA0 190 aa6.43□□□□□ -1.38
VPS13A-201ENST00000355766 GFM2Q969S9 779 aaKnown RBP6.43□□□□□ -1.38
VPS13A-201ENST00000355766 FAM162AQ96A26 154 aa6.43□□□□□ -1.38
VPS13A-201ENST00000355766 SLCO4A1Q96BD0 722 aa6.43□□□□□ -1.38
VPS13A-201ENST00000355766 NUDT11Q96G61 164 aa6.43□□□□□ -1.38
VPS13A-201ENST00000355766 AMDHD1Q96NU7 426 aa6.43□□□□□ -1.38
VPS13A-201ENST00000355766 MAP3K3Q99759 626 aa6.43□□□□□ -1.38
VPS13A-201ENST00000355766 PELOQ9BRX2 385 aaKnown RBP6.43□□□□□ -1.38
VPS13A-201ENST00000355766 C9orf16Q9BUW7 83 aa6.43□□□□□ -1.38
VPS13A-201ENST00000355766 EPS8L2Q9H6S3 715 aa6.43□□□□□ -1.38
VPS13A-201ENST00000355766 ANKHQ9HCJ1 492 aa6.43□□□□□ -1.38
VPS13A-201ENST00000355766 SLC6A13Q9NSD5 602 aa6.43□□□□□ -1.38
VPS13A-201ENST00000355766 ADPRHL2Q9NX46 363 aa6.43□□□□□ -1.38
VPS13A-201ENST00000355766 TEX10Q9NXF1 929 aaPredicted RBP6.43□□□□□ -1.38
VPS13A-201ENST00000355766 KCMF1Q9P0J7 381 aa6.43□□□□□ -1.38
VPS13A-201ENST00000355766 PTGFRNQ9P2B2 879 aa6.43□□□□□ -1.38
VPS13A-201ENST00000355766 ZNF639Q9UID6 485 aa6.43□□□□□ -1.38
VPS13A-201ENST00000355766 CES1P1Q9UKY3 287 aa6.43□□□□□ -1.38
VPS13A-201ENST00000355766 FAF1Q9UNN5 650 aaPredicted RBP6.43□□□□□ -1.38
VPS13A-201ENST00000355766 ANGPT4Q9Y264 503 aa6.43□□□□□ -1.38
VPS13A-201ENST00000355766 MRPS33Q9Y291 106 aaKnown RBP6.43□□□□□ -1.38
VPS13A-201ENST00000355766 PADI2Q9Y2J8 665 aa6.43□□□□□ -1.38
VPS13A-201ENST00000355766 ZNF780BQ9Y6R6 833 aa6.43□□□□□ -1.38
VPS13A-201ENST00000355766 A0A0J9YVX5 310 aa6.42□□□□□ -1.38
VPS13A-201ENST00000355766 A0A1W2PR48 441 aa6.42□□□□□ -1.38
VPS13A-201ENST00000355766 HYKKA2RU49 373 aa6.42□□□□□ -1.38
VPS13A-201ENST00000355766 TMEM247A6NEH6 219 aa6.42□□□□□ -1.38
VPS13A-201ENST00000355766 DUXAA6NLW8 204 aa6.42□□□□□ -1.38
VPS13A-201ENST00000355766 WASHC1A8K0Z3 465 aa6.42□□□□□ -1.38
VPS13A-201ENST00000355766 C9J4A7 227 aa6.42□□□□□ -1.38
VPS13A-201ENST00000355766 RTCAO00442 366 aaKnown RBP6.42□□□□□ -1.38
VPS13A-201ENST00000355766 P2RX6O15547 441 aa6.42□□□□□ -1.38
VPS13A-201ENST00000355766 ZNF749O43361 778 aa6.42□□□□□ -1.38
VPS13A-201ENST00000355766 JRKO75564 520 aa6.42□□□□□ -1.38
VPS13A-201ENST00000355766 BAG2O95816 211 aa6.42□□□□□ -1.38
VPS13A-201ENST00000355766 AK1P00568 194 aa6.42□□□□□ -1.38
VPS13A-201ENST00000355766 HPRP00739 348 aa6.42□□□□□ -1.38
VPS13A-201ENST00000355766 GBAP04062 536 aa6.42□□□□□ -1.38
VPS13A-201ENST00000355766 SERPIND1P05546 499 aa6.42□□□□□ -1.38
VPS13A-201ENST00000355766 CD99P14209 185 aa6.42□□□□□ -1.38
VPS13A-201ENST00000355766 ST6GAL1P15907 406 aa6.42□□□□□ -1.38
VPS13A-201ENST00000355766 CHI3L1P36222 383 aaPredicted RBP6.42□□□□□ -1.38
VPS13A-201ENST00000355766 TDGF1P3P51864 188 aa6.42□□□□□ -1.38
VPS13A-201ENST00000355766 LIM2P55344 173 aa6.42□□□□□ -1.38
VPS13A-201ENST00000355766 SOX8P57073 446 aa6.42□□□□□ -1.38
VPS13A-201ENST00000355766 RAB38P57729 211 aa6.42□□□□□ -1.38
VPS13A-201ENST00000355766 BTN3A2P78410 334 aa6.42□□□□□ -1.38
VPS13A-201ENST00000355766 EEF1A2Q05639 463 aaKnown RBP6.42□□□□□ -1.38
VPS13A-201ENST00000355766 EPS8Q12929 822 aa6.42□□□□□ -1.38
VPS13A-201ENST00000355766 GRM7Q14831 915 aa6.42□□□□□ -1.38
VPS13A-201ENST00000355766 ZNF169Q14929 603 aaPredicted RBP6.42□□□□□ -1.38
VPS13A-201ENST00000355766 FAM214AQ32MH5 1076 aa6.42□□□□□ -1.38
VPS13A-201ENST00000355766 GTDC1Q4AE62 458 aa6.42□□□□□ -1.38
VPS13A-201ENST00000355766 PRAMEF17Q5VTA0 474 aa6.42□□□□□ -1.38
VPS13A-201ENST00000355766 AP1ARQ63HQ0 302 aa6.42□□□□□ -1.38
VPS13A-201ENST00000355766 TLDC1Q6P9B6 456 aa6.42□□□□□ -1.38
VPS13A-201ENST00000355766 IGFL2Q6UWQ7 119 aa6.42□□□□□ -1.38
VPS13A-201ENST00000355766 EIF3MQ7L2H7 374 aaKnown RBP6.42□□□□□ -1.38
VPS13A-201ENST00000355766 TRIM73Q86UV7 250 aa6.42□□□□□ -1.38
VPS13A-201ENST00000355766 IFNEQ86WN2 208 aa6.42□□□□□ -1.38
VPS13A-201ENST00000355766 PTOV1Q86YD1 416 aa6.42□□□□□ -1.38
VPS13A-201ENST00000355766 ZNF595Q8IYB9 648 aa6.42□□□□□ -1.38
VPS13A-201ENST00000355766 DTX3Q8N9I9 347 aa6.42□□□□□ -1.38
VPS13A-201ENST00000355766 ICA1LQ8NDH6 482 aa6.42□□□□□ -1.38
VPS13A-201ENST00000355766 HIPK4Q8NE63 616 aa6.42□□□□□ -1.38
VPS13A-201ENST00000355766 NRG4Q8WWG1 115 aa6.42□□□□□ -1.38
VPS13A-201ENST00000355766 FIG4Q92562 907 aa6.42□□□□□ -1.38
VPS13A-201ENST00000355766 CIDECQ96AQ7 238 aaPredicted RBP6.42□□□□□ -1.38
VPS13A-201ENST00000355766 EME1Q96AY2 570 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms