RNA–Protein interactions for RNA: ENST00000355560.4

CLK2-201, Transcript of CDC like kinase 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CLK2, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2-201ENST00000355560 MAN1A2O60476 641 aa23.72■■□□□ 1.39
CLK2-201ENST00000355560 TIAF1O95411 115 aa23.72■■□□□ 1.39
CLK2-201ENST00000355560 CKMT1AP12532 417 aa23.72■■□□□ 1.39
CLK2-201ENST00000355560 GP2P55259 537 aaKnown RBP23.72■■□□□ 1.39
CLK2-201ENST00000355560 COX15Q7KZN9 410 aa23.72■■□□□ 1.39
CLK2-201ENST00000355560 ALDH16A1Q8IZ83 802 aa23.72■■□□□ 1.39
CLK2-201ENST00000355560 ZSCAN1Q8NBB4 408 aa23.72■■□□□ 1.39
CLK2-201ENST00000355560 LMF1Q96S06 567 aa23.72■■□□□ 1.39
CLK2-201ENST00000355560 PRSS27Q9BQR3 290 aa23.72■■□□□ 1.39
CLK2-201ENST00000355560 DSN1Q9H410 356 aa23.72■■□□□ 1.39
CLK2-201ENST00000355560 C14orf105Q9NVL8 296 aa23.72■■□□□ 1.39
CLK2-201ENST00000355560 FKBP14Q9NWM8 211 aa23.72■■□□□ 1.39
CLK2-201ENST00000355560 DNAJB12Q9NXW2 375 aaKnown RBP23.72■■□□□ 1.39
CLK2-201ENST00000355560 WARS2Q9UGM6 360 aaKnown RBP23.72■■□□□ 1.39
CLK2-201ENST00000355560 DDAH2O95865 285 aa23.72■■□□□ 1.39
CLK2-201ENST00000355560 IGKV3-11P04433 115 aa23.72■■□□□ 1.39
CLK2-201ENST00000355560 GPR4P46093 362 aa23.72■■□□□ 1.39
CLK2-201ENST00000355560 ATP12AP54707 1039 aa23.72■■□□□ 1.39
CLK2-201ENST00000355560 FGFBP1Q14512 234 aa23.72■■□□□ 1.39
CLK2-201ENST00000355560 LSRQ86X29 649 aaPredicted RBP23.72■■□□□ 1.39
CLK2-201ENST00000355560 GRAMD2AQ8IUY3 354 aa23.72■■□□□ 1.39
CLK2-201ENST00000355560 RNF217Q8TC41 542 aa23.72■■□□□ 1.39
CLK2-201ENST00000355560 MYDGFQ969H8 173 aa23.72■■□□□ 1.39
CLK2-201ENST00000355560 MPP4Q96JB8 637 aa23.72■■□□□ 1.39
CLK2-201ENST00000355560 SLC46A1Q96NT5 459 aa23.72■■□□□ 1.39
CLK2-201ENST00000355560 ACOT13Q9NPJ3 140 aa23.72■■□□□ 1.39
CLK2-201ENST00000355560 SLC22A11Q9NSA0 550 aa23.72■■□□□ 1.39
CLK2-201ENST00000355560 ST6GALNAC1Q9NSC7 600 aaPredicted RBP23.72■■□□□ 1.39
CLK2-201ENST00000355560 RARRES3Q9UL19 164 aa23.72■■□□□ 1.39
CLK2-201ENST00000355560 SH3D21A4FU49 640 aa23.71■■□□□ 1.39
CLK2-201ENST00000355560 H3BMQ9 156 aa23.71■■□□□ 1.39
CLK2-201ENST00000355560 SYPP08247 313 aa23.71■■□□□ 1.39
CLK2-201ENST00000355560 FPR3P25089 353 aa23.71■■□□□ 1.39
CLK2-201ENST00000355560 C21orf33P30042 268 aaPredicted RBP23.71■■□□□ 1.39
CLK2-201ENST00000355560 RORAP35398 523 aa23.71■■□□□ 1.39
CLK2-201ENST00000355560 GIPRP48546 466 aa23.71■■□□□ 1.39
CLK2-201ENST00000355560 SNRPGP62308 76 aaKnown RBP23.71■■□□□ 1.39
CLK2-201ENST00000355560 MVKQ03426 396 aa23.71■■□□□ 1.39
CLK2-201ENST00000355560 GINS1Q14691 196 aa23.71■■□□□ 1.39
CLK2-201ENST00000355560 CPEB4Q17RY0 729 aaKnown RBP eCLIP23.71■■□□□ 1.39
CLK2-201ENST00000355560 WDR88Q6ZMY6 472 aa23.71■■□□□ 1.39
CLK2-201ENST00000355560 SLC38A9Q8NBW4 561 aa23.71■■□□□ 1.39
CLK2-201ENST00000355560 TEX47Q8TBZ9 253 aa23.71■■□□□ 1.39
CLK2-201ENST00000355560 ZNF721Q8TF20 911 aa23.71■■□□□ 1.39
CLK2-201ENST00000355560 EFHD2Q96C19 240 aaPredicted RBP23.71■■□□□ 1.39
CLK2-201ENST00000355560 COG8Q96MW5 612 aa23.71■■□□□ 1.39
CLK2-201ENST00000355560 DOK1Q99704 481 aa23.71■■□□□ 1.39
CLK2-201ENST00000355560 EVA1AQ9H8M9 152 aa23.71■■□□□ 1.39
CLK2-201ENST00000355560 TVP23BQ9NYZ1 205 aa23.71■■□□□ 1.39
CLK2-201ENST00000355560 ENO4A6NNW6 628 aa23.71■■□□□ 1.39
CLK2-201ENST00000355560 POLR1CO15160 346 aaPredicted RBP23.71■■□□□ 1.39
CLK2-201ENST00000355560 TRMUO75648 421 aaKnown RBP23.71■■□□□ 1.39
CLK2-201ENST00000355560 PSMD4P55036 377 aaKnown RBP23.71■■□□□ 1.39
CLK2-201ENST00000355560 RASSF6Q6ZTQ3 369 aa23.71■■□□□ 1.39
CLK2-201ENST00000355560 C7orf57Q8NEG2 295 aa23.71■■□□□ 1.39
CLK2-201ENST00000355560 OR8J1Q8NGP2 316 aa23.71■■□□□ 1.39
CLK2-201ENST00000355560 TRUB1Q8WWH5 349 aaKnown RBP23.71■■□□□ 1.39
CLK2-201ENST00000355560 ZNF559Q9BR84 538 aa23.71■■□□□ 1.39
CLK2-201ENST00000355560 SMOC1Q9H4F8 434 aa23.71■■□□□ 1.39
CLK2-201ENST00000355560 KRCC1Q9NPI7 259 aaPredicted RBP23.71■■□□□ 1.39
CLK2-201ENST00000355560 SELENONQ9NZV5 590 aa23.71■■□□□ 1.39
CLK2-201ENST00000355560 CFL2Q9Y281 166 aa23.71■■□□□ 1.39
CLK2-201ENST00000355560 COL5A1P20908 1838 aaPredicted RBP23.7■■□□□ 1.39
CLK2-201ENST00000355560 NOL3O60936 208 aaKnown RBP23.7■■□□□ 1.38
CLK2-201ENST00000355560 ADAM11O75078 769 aa23.7■■□□□ 1.38
CLK2-201ENST00000355560 SCRG1O75711 98 aa23.7■■□□□ 1.38
CLK2-201ENST00000355560 CDK5Q00535 292 aa23.7■■□□□ 1.38
CLK2-201ENST00000355560 SHISA6Q6ZSJ9 500 aa23.7■■□□□ 1.38
CLK2-201ENST00000355560 TCEANCQ8N8B7 351 aa23.7■■□□□ 1.38
CLK2-201ENST00000355560 OR4C3Q8NH37 302 aa23.7■■□□□ 1.38
CLK2-201ENST00000355560 NXF5Q9H1B4 397 aaKnown RBP23.7■■□□□ 1.38
CLK2-201ENST00000355560 TMEM27Q9HBJ8 222 aa23.7■■□□□ 1.38
CLK2-201ENST00000355560 CDK1P06493 297 aa23.69■■□□□ 1.38
CLK2-201ENST00000355560 PPICP45877 212 aa23.69■■□□□ 1.38
CLK2-201ENST00000355560 SMSP52788 366 aa23.69■■□□□ 1.38
CLK2-201ENST00000355560 PHF19Q5T6S3 580 aa23.69■■□□□ 1.38
CLK2-201ENST00000355560 PWWP2BQ6NUJ5 590 aa23.69■■□□□ 1.38
CLK2-201ENST00000355560 ACSM5Q6NUN0 579 aa23.69■■□□□ 1.38
CLK2-201ENST00000355560 ZNF613Q6PF04 617 aa23.69■■□□□ 1.38
CLK2-201ENST00000355560 POGLUT1Q8NBL1 392 aa23.69■■□□□ 1.38
CLK2-201ENST00000355560 B3GNT7Q8NFL0 401 aa23.69■■□□□ 1.38
CLK2-201ENST00000355560 GRHL3Q8TE85 626 aa23.69■■□□□ 1.38
CLK2-201ENST00000355560 DAZLQ92904 295 aaKnown RBP23.69■■□□□ 1.38
CLK2-201ENST00000355560 KLF4O43474 513 aa23.69■■□□□ 1.38
CLK2-201ENST00000355560 AHCYL1O43865 530 aa23.69■■□□□ 1.38
CLK2-201ENST00000355560 ENTPD6O75354 484 aa23.69■■□□□ 1.38
CLK2-201ENST00000355560 LYPD3O95274 346 aa23.69■■□□□ 1.38
CLK2-201ENST00000355560 SH3BGRP55822 239 aaPredicted RBP23.69■■□□□ 1.38
CLK2-201ENST00000355560 FOXL2P58012 376 aa23.69■■□□□ 1.38
CLK2-201ENST00000355560 LSAMPQ13449 338 aa23.69■■□□□ 1.38
CLK2-201ENST00000355560 ZBTB44Q8NCP5 570 aa23.69■■□□□ 1.38
CLK2-201ENST00000355560 OR8D4Q8NGM9 314 aa23.69■■□□□ 1.38
CLK2-201ENST00000355560 OR14A16Q8NHC5 309 aa23.69■■□□□ 1.38
CLK2-201ENST00000355560 STT3BQ8TCJ2 826 aa23.69■■□□□ 1.38
CLK2-201ENST00000355560 TMEM239Q8WW34 195 aa23.69■■□□□ 1.38
CLK2-201ENST00000355560 GAL3ST4Q96RP7 486 aa23.69■■□□□ 1.38
CLK2-201ENST00000355560 GFM1Q96RP9 751 aaKnown RBP23.69■■□□□ 1.38
CLK2-201ENST00000355560 SIDT1Q9NXL6 827 aaKnown RBP23.69■■□□□ 1.38
CLK2-201ENST00000355560 DNAJC27Q9NZQ0 273 aa23.69■■□□□ 1.38
CLK2-201ENST00000355560 ACAA2P42765 397 aaKnown RBP23.68■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms