RNA–Protein interactions for RNA: ENST00000354547.7

COL13A1-201, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 3,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-201ENST00000354547 OR2M4Q96R27 311 aa18.21■□□□□ 0.51
COL13A1-201ENST00000354547 WACQ9BTA9 647 aa18.21■□□□□ 0.51
COL13A1-201ENST00000354547 MED18Q9BUE0 208 aa18.21■□□□□ 0.51
COL13A1-201ENST00000354547 LYARQ9NX58 379 aaKnown RBP18.21■□□□□ 0.51
COL13A1-201ENST00000354547 NLGN3Q9NZ94 848 aa18.21■□□□□ 0.51
COL13A1-201ENST00000354547 CDH10Q9Y6N8 788 aa18.21■□□□□ 0.51
COL13A1-201ENST00000354547 FGF9P31371 208 aaPredicted RBP18.2■□□□□ 0.5
COL13A1-201ENST00000354547 PPP3R1P63098 170 aa18.2■□□□□ 0.5
COL13A1-201ENST00000354547 PRRT3Q5FWE3 981 aa18.2■□□□□ 0.5
COL13A1-201ENST00000354547 ZNF322Q6U7Q0 402 aaPredicted RBP18.2■□□□□ 0.5
COL13A1-201ENST00000354547 OR5T3Q8NGG3 340 aa18.2■□□□□ 0.5
COL13A1-201ENST00000354547 SLC7A6Q92536 515 aa18.2■□□□□ 0.5
COL13A1-201ENST00000354547 GAL3ST3Q96A11 431 aa18.2■□□□□ 0.5
COL13A1-201ENST00000354547 SDF2Q99470 211 aa18.2■□□□□ 0.5
COL13A1-201ENST00000354547 YIPF2Q9BWQ6 316 aa18.2■□□□□ 0.5
COL13A1-201ENST00000354547 TMEM168Q9H0V1 697 aa18.2■□□□□ 0.5
COL13A1-201ENST00000354547 RWDD3Q9Y3V2 267 aa18.2■□□□□ 0.5
COL13A1-201ENST00000354547 DENND4AQ7Z401 1863 aa18.2■□□□□ 0.5
COL13A1-201ENST00000354547 RASGRP1O95267 797 aa18.2■□□□□ 0.5
COL13A1-201ENST00000354547 SAGP10523 405 aaPredicted RBP18.2■□□□□ 0.5
COL13A1-201ENST00000354547 HTR1FP30939 366 aa18.2■□□□□ 0.5
COL13A1-201ENST00000354547 ADPRHP54922 357 aa18.2■□□□□ 0.5
COL13A1-201ENST00000354547 TNFRSF17Q02223 184 aa18.2■□□□□ 0.5
COL13A1-201ENST00000354547 PRAMEF8Q5VWM4 474 aa18.2■□□□□ 0.5
COL13A1-201ENST00000354547 PRAMEF7Q5VXH5 474 aa18.2■□□□□ 0.5
COL13A1-201ENST00000354547 PPP2R2DQ66LE6 453 aa18.2■□□□□ 0.5
COL13A1-201ENST00000354547 ARL9Q6T311 187 aa18.2■□□□□ 0.5
COL13A1-201ENST00000354547 ARIH2OSQ8N7S6 290 aa18.2■□□□□ 0.5
COL13A1-201ENST00000354547 FAM181AQ8N9Y4 354 aa18.2■□□□□ 0.5
COL13A1-201ENST00000354547 ZNF784Q8NCA9 323 aaPredicted RBP18.2■□□□□ 0.5
COL13A1-201ENST00000354547 FANK1Q8TC84 345 aa18.2■□□□□ 0.5
COL13A1-201ENST00000354547 STARD5Q9NSY2 213 aa18.2■□□□□ 0.5
COL13A1-201ENST00000354547 SPEGQ15772 3267 aa18.2■□□□□ 0.5
COL13A1-201ENST00000354547 GYPBP06028 91 aa18.2■□□□□ 0.5
COL13A1-201ENST00000354547 CLUP10909 449 aa18.2■□□□□ 0.5
COL13A1-201ENST00000354547 NT5EP21589 574 aa18.2■□□□□ 0.5
COL13A1-201ENST00000354547 TBXA2RP21731 343 aa18.2■□□□□ 0.5
COL13A1-201ENST00000354547 HTR2AP28223 471 aa18.2■□□□□ 0.5
COL13A1-201ENST00000354547 DDOSTP39656 456 aa18.2■□□□□ 0.5
COL13A1-201ENST00000354547 MRPL2Q5T653 305 aaKnown RBP18.2■□□□□ 0.5
COL13A1-201ENST00000354547 VASNQ6EMK4 673 aa18.2■□□□□ 0.5
COL13A1-201ENST00000354547 TMEM91Q6ZNR0 172 aa18.2■□□□□ 0.5
COL13A1-201ENST00000354547 PATE1Q8WXA2 126 aa18.2■□□□□ 0.5
COL13A1-201ENST00000354547 ZNF649Q9BS31 505 aa18.2■□□□□ 0.5
COL13A1-201ENST00000354547 RNF32Q9H0A6 362 aa18.2■□□□□ 0.5
COL13A1-201ENST00000354547 SFXN1Q9H9B4 322 aa18.2■□□□□ 0.5
COL13A1-201ENST00000354547 GDE1Q9NZC3 331 aa18.2■□□□□ 0.5
COL13A1-201ENST00000354547 CLEC4AQ9UMR7 237 aa18.2■□□□□ 0.5
COL13A1-201ENST00000354547 FAM240BA0A1B0GVZ2 78 aa18.19■□□□□ 0.5
COL13A1-201ENST00000354547 UNC119BA6NIH7 251 aa18.19■□□□□ 0.5
COL13A1-201ENST00000354547 C5orf67F2Z3F1 127 aa18.19■□□□□ 0.5
COL13A1-201ENST00000354547 CHRNB1P11230 501 aa18.19■□□□□ 0.5
COL13A1-201ENST00000354547 TEAD1P28347 426 aa18.19■□□□□ 0.5
COL13A1-201ENST00000354547 MAP2K3P46734 347 aa18.19■□□□□ 0.5
COL13A1-201ENST00000354547 ZNF136P52737 540 aa18.19■□□□□ 0.5
COL13A1-201ENST00000354547 NUDT18Q6ZVK8 323 aa18.19■□□□□ 0.5
COL13A1-201ENST00000354547 IFT27Q9BW83 186 aa18.19■□□□□ 0.5
COL13A1-201ENST00000354547 MAT2BQ9NZL9 334 aa18.19■□□□□ 0.5
COL13A1-201ENST00000354547 USP36Q9P275 1121 aaKnown RBP18.19■□□□□ 0.5
COL13A1-201ENST00000354547 PRUNE2Q8WUY3 3088 aa18.19■□□□□ 0.5
COL13A1-201ENST00000354547 TRAV27A0A087WT01 109 aa18.19■□□□□ 0.5
COL13A1-201ENST00000354547 CHST10O43529 356 aa18.19■□□□□ 0.5
COL13A1-201ENST00000354547 OR5F1O95221 314 aa18.19■□□□□ 0.5
COL13A1-201ENST00000354547 BMP7P18075 431 aa18.19■□□□□ 0.5
COL13A1-201ENST00000354547 TATDN3Q17R31 274 aa18.19■□□□□ 0.5
COL13A1-201ENST00000354547 CD200R1LQ6Q8B3 271 aa18.19■□□□□ 0.5
COL13A1-201ENST00000354547 ASB18Q6ZVZ8 466 aa18.19■□□□□ 0.5
COL13A1-201ENST00000354547 SFTPA2Q8IWL1 248 aa18.19■□□□□ 0.5
COL13A1-201ENST00000354547 C7orf61Q8IZ16 206 aa18.19■□□□□ 0.5
COL13A1-201ENST00000354547 RDH10Q8IZV5 341 aa18.19■□□□□ 0.5
COL13A1-201ENST00000354547 OR13C2Q8NGS9 318 aa18.19■□□□□ 0.5
COL13A1-201ENST00000354547 ALG8Q9BVK2 526 aa18.19■□□□□ 0.5
COL13A1-201ENST00000354547 TMEM106CQ9BVX2 250 aa18.19■□□□□ 0.5
COL13A1-201ENST00000354547 SIDT1Q9NXL6 827 aaKnown RBP18.19■□□□□ 0.5
COL13A1-201ENST00000354547 OR6C2Q9NZP2 312 aa18.19■□□□□ 0.5
COL13A1-201ENST00000354547 KCMF1Q9P0J7 381 aa18.19■□□□□ 0.5
COL13A1-201ENST00000354547 MYO15AQ9UKN7 3530 aa18.18■□□□□ 0.5
COL13A1-201ENST00000354547 DAPL1A0PJW8 107 aa18.18■□□□□ 0.5
COL13A1-201ENST00000354547 OR6C70A6NIJ9 312 aa18.18■□□□□ 0.5
COL13A1-201ENST00000354547 GNB5O14775 395 aa18.18■□□□□ 0.5
COL13A1-201ENST00000354547 FXYD6P3P58550 94 aa18.18■□□□□ 0.5
COL13A1-201ENST00000354547 RPS15AP62244 130 aaKnown RBP18.18■□□□□ 0.5
COL13A1-201ENST00000354547 SLC3A1Q07837 685 aa18.18■□□□□ 0.5
COL13A1-201ENST00000354547 EOGTQ5NDL2 527 aa18.18■□□□□ 0.5
COL13A1-201ENST00000354547 HEPHL1Q6MZM0 1159 aa18.18■□□□□ 0.5
COL13A1-201ENST00000354547 NR2C2APQ86WQ0 139 aa18.18■□□□□ 0.5
COL13A1-201ENST00000354547 COX18Q8N8Q8 333 aa18.18■□□□□ 0.5
COL13A1-201ENST00000354547 OR52L1Q8NGH7 329 aa18.18■□□□□ 0.5
COL13A1-201ENST00000354547 CD180Q99467 661 aa18.18■□□□□ 0.5
COL13A1-201ENST00000354547 HDHD2Q9H0R4 259 aa18.18■□□□□ 0.5
COL13A1-201ENST00000354547 PPIL3Q9H2H8 161 aaKnown RBP18.18■□□□□ 0.5
COL13A1-201ENST00000354547 PPP1R3EQ9H7J1 279 aa18.18■□□□□ 0.5
COL13A1-201ENST00000354547 FBXL4Q9UKA2 621 aa18.18■□□□□ 0.5
COL13A1-201ENST00000354547 OR6C74A6NCV1 312 aa18.18■□□□□ 0.5
COL13A1-201ENST00000354547 B3GALT2O43825 422 aa18.18■□□□□ 0.5
COL13A1-201ENST00000354547 HMGN1P05114 100 aa18.18■□□□□ 0.5
COL13A1-201ENST00000354547 LAMP2P13473 410 aa18.18■□□□□ 0.5
COL13A1-201ENST00000354547 S100A1P23297 94 aa18.18■□□□□ 0.5
COL13A1-201ENST00000354547 TLX1P31314 330 aaPredicted RBP18.18■□□□□ 0.5
COL13A1-201ENST00000354547 EVX1P49640 407 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms