RNA–Protein interactions for RNA: ENST00000351948.8

SMC6-201, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,173 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-201ENST00000351948 TVP23AA6NH52 213 aa12.81□□□□□ -0.36
SMC6-201ENST00000351948 METTL12A8MUP2 240 aa12.81□□□□□ -0.36
SMC6-201ENST00000351948 F13BP05160 661 aa12.81□□□□□ -0.36
SMC6-201ENST00000351948 PGAM2P15259 253 aa12.81□□□□□ -0.36
SMC6-201ENST00000351948 SLC6A12P48065 614 aa12.81□□□□□ -0.36
SMC6-201ENST00000351948 CCR5P51681 352 aa12.81□□□□□ -0.36
SMC6-201ENST00000351948 SCRN3Q0VDG4 424 aa12.81□□□□□ -0.36
SMC6-201ENST00000351948 OR1Q1Q15612 314 aa12.81□□□□□ -0.36
SMC6-201ENST00000351948 C9orf135Q5VTT2 229 aa12.81□□□□□ -0.36
SMC6-201ENST00000351948 PLEKHG7Q6ZR37 379 aa12.81□□□□□ -0.36
SMC6-201ENST00000351948 PJA1Q8NG27 643 aa12.81□□□□□ -0.36
SMC6-201ENST00000351948 CEP76Q8TAP6 659 aa12.81□□□□□ -0.36
SMC6-201ENST00000351948 NEIL3Q8TAT5 605 aa12.81□□□□□ -0.36
SMC6-201ENST00000351948 ZFP90Q8TF47 636 aa12.81□□□□□ -0.36
SMC6-201ENST00000351948 C8orf44Q96CB5 159 aa12.81□□□□□ -0.36
SMC6-201ENST00000351948 TMEM41AQ96HV5 264 aa12.81□□□□□ -0.36
SMC6-201ENST00000351948 MTCH2Q9Y6C9 303 aa12.81□□□□□ -0.36
SMC6-201ENST00000351948 A0A1W2PQ72 361 aa12.81□□□□□ -0.36
SMC6-201ENST00000351948 PSKH1P11801 424 aa12.81□□□□□ -0.36
SMC6-201ENST00000351948 GLULP15104 373 aa12.81□□□□□ -0.36
SMC6-201ENST00000351948 GAB1Q13480 694 aa12.81□□□□□ -0.36
SMC6-201ENST00000351948 TBPL2Q6SJ96 375 aa12.81□□□□□ -0.36
SMC6-201ENST00000351948 RADILQ96JH8 1075 aa12.81□□□□□ -0.36
SMC6-201ENST00000351948 SNX11Q9Y5W9 270 aa12.81□□□□□ -0.36
SMC6-201ENST00000351948 A0A1W2PR48 441 aa12.81□□□□□ -0.36
SMC6-201ENST00000351948 SLC22A31A6NKX4 558 aa12.81□□□□□ -0.36
SMC6-201ENST00000351948 S100GP29377 79 aa12.81□□□□□ -0.36
SMC6-201ENST00000351948 KLHL26Q53HC5 615 aa12.81□□□□□ -0.36
SMC6-201ENST00000351948 MED25Q71SY5 747 aa12.81□□□□□ -0.36
SMC6-201ENST00000351948 ETFBKMTQ8IXQ9 262 aa12.81□□□□□ -0.36
SMC6-201ENST00000351948 GOLM1Q8NBJ4 401 aa12.81□□□□□ -0.36
SMC6-201ENST00000351948 DNAJA4Q8WW22 397 aaPredicted RBP12.81□□□□□ -0.36
SMC6-201ENST00000351948 SENP5Q96HI0 755 aaPredicted RBP12.81□□□□□ -0.36
SMC6-201ENST00000351948 TEX101Q9BY14 249 aa12.81□□□□□ -0.36
SMC6-201ENST00000351948 GORASP2Q9H8Y8 452 aa12.81□□□□□ -0.36
SMC6-201ENST00000351948 AGPAT4Q9NRZ5 378 aa12.81□□□□□ -0.36
SMC6-201ENST00000351948 POU2F3Q9UKI9 436 aa12.81□□□□□ -0.36
SMC6-201ENST00000351948 SPTY2D1-AS1A0A0U1RR47 76 aa12.8□□□□□ -0.36
SMC6-201ENST00000351948 CASC3O15234 703 aaKnown RBP12.8□□□□□ -0.36
SMC6-201ENST00000351948 ENTPD6O75354 484 aa12.8□□□□□ -0.36
SMC6-201ENST00000351948 DCKP27707 260 aa12.8□□□□□ -0.36
SMC6-201ENST00000351948 SNU13P55769 128 aaKnown RBP12.8□□□□□ -0.36
SMC6-201ENST00000351948 ANKDD1AQ495B1 522 aa12.8□□□□□ -0.36
SMC6-201ENST00000351948 B3GLCTQ6Y288 498 aa12.8□□□□□ -0.36
SMC6-201ENST00000351948 NXPE2Q96DL1 559 aa12.8□□□□□ -0.36
SMC6-201ENST00000351948 PRRC1Q96M27 445 aa12.8□□□□□ -0.36
SMC6-201ENST00000351948 CNN2Q99439 309 aaKnown RBP12.8□□□□□ -0.36
SMC6-201ENST00000351948 R4GN57 208 aa12.8□□□□□ -0.36
SMC6-201ENST00000351948 EEF1A1P68104 462 aaKnown RBP12.8□□□□□ -0.36
SMC6-201ENST00000351948 CBFBQ13951 182 aa12.8□□□□□ -0.36
SMC6-201ENST00000351948 SCGB2B2Q4G0G5 96 aa12.8□□□□□ -0.36
SMC6-201ENST00000351948 FAM71E1Q6IPT2 247 aa12.8□□□□□ -0.36
SMC6-201ENST00000351948 PAMR1Q6UXH9 720 aa12.8□□□□□ -0.36
SMC6-201ENST00000351948 ALDH16A1Q8IZ83 802 aa12.8□□□□□ -0.36
SMC6-201ENST00000351948 ANKK1Q8NFD2 765 aa12.8□□□□□ -0.36
SMC6-201ENST00000351948 NRTNQ99748 197 aa12.8□□□□□ -0.36
SMC6-201ENST00000351948 LRRC61Q9BV99 259 aa12.8□□□□□ -0.36
SMC6-201ENST00000351948 TIMMDC1Q9NPL8 285 aa12.8□□□□□ -0.36
SMC6-201ENST00000351948 EP300Q09472 2414 aaPredicted RBP12.8□□□□□ -0.36
SMC6-201ENST00000351948 TRBV4-1A0A0J9YWV2 114 aa12.8□□□□□ -0.36
SMC6-201ENST00000351948 SLC2A2P11168 524 aaPredicted RBP12.8□□□□□ -0.36
SMC6-201ENST00000351948 DRD3P35462 400 aa12.8□□□□□ -0.36
SMC6-201ENST00000351948 DPP6P42658 865 aa12.8□□□□□ -0.36
SMC6-201ENST00000351948 NKAIN1Q4KMZ8 207 aa12.8□□□□□ -0.36
SMC6-201ENST00000351948 ARMC10Q8N2F6 343 aa12.8□□□□□ -0.36
SMC6-201ENST00000351948 SFXN5Q8TD22 340 aa12.8□□□□□ -0.36
SMC6-201ENST00000351948 PGAM5Q96HS1 289 aa12.8□□□□□ -0.36
SMC6-201ENST00000351948 OR51B6Q9H340 312 aa12.8□□□□□ -0.36
SMC6-201ENST00000351948 ZNFX1Q9P2E3 1918 aaKnown RBP12.8□□□□□ -0.36
SMC6-201ENST00000351948 ZNF878C9JN71 531 aa12.8□□□□□ -0.36
SMC6-201ENST00000351948 KCNK5O95279 499 aa12.8□□□□□ -0.36
SMC6-201ENST00000351948 LCKP06239 509 aa12.8□□□□□ -0.36
SMC6-201ENST00000351948 BTG2P78543 158 aa12.8□□□□□ -0.36
SMC6-201ENST00000351948 PELI3Q8N2H9 469 aa12.8□□□□□ -0.36
SMC6-201ENST00000351948 OR2T4Q8NH00 348 aa12.8□□□□□ -0.36
SMC6-201ENST00000351948 NARS2Q96I59 477 aaKnown RBP12.8□□□□□ -0.36
SMC6-201ENST00000351948 TCRBV3S1A0A5B6 114 aa12.79□□□□□ -0.36
SMC6-201ENST00000351948 GRXCR2A6NFK2 248 aa12.79□□□□□ -0.36
SMC6-201ENST00000351948 F8A1P23610 371 aa12.79□□□□□ -0.36
SMC6-201ENST00000351948 GK3PQ14409 553 aa12.79□□□□□ -0.36
SMC6-201ENST00000351948 XKR7Q5GH72 579 aa12.79□□□□□ -0.36
SMC6-201ENST00000351948 PRAMEF17Q5VTA0 474 aa12.79□□□□□ -0.36
SMC6-201ENST00000351948 FRMPD2BQ6IN97 320 aa12.79□□□□□ -0.36
SMC6-201ENST00000351948 TMPPEQ6ZT21 453 aa12.79□□□□□ -0.36
SMC6-201ENST00000351948 TSPYL5Q86VY4 417 aaPredicted RBP12.79□□□□□ -0.36
SMC6-201ENST00000351948 ELP4Q96EB1 424 aa12.79□□□□□ -0.36
SMC6-201ENST00000351948 FOLH1BQ9HBA9 442 aa12.79□□□□□ -0.36
SMC6-201ENST00000351948 TMEM45AQ9NWC5 275 aa12.79□□□□□ -0.36
SMC6-201ENST00000351948 SPAG17Q6Q759 2223 aa12.79□□□□□ -0.36
SMC6-201ENST00000351948 A0A1B0GX78 115 aa12.79□□□□□ -0.36
SMC6-201ENST00000351948 C12orf71A8MTZ7 269 aa12.79□□□□□ -0.36
SMC6-201ENST00000351948 FLRT2O43155 660 aa12.79□□□□□ -0.36
SMC6-201ENST00000351948 GGT2P36268 569 aa12.79□□□□□ -0.36
SMC6-201ENST00000351948 GALNT15Q8N3T1 639 aa12.79□□□□□ -0.36
SMC6-201ENST00000351948 MARVELD2Q8N4S9 558 aa12.79□□□□□ -0.36
SMC6-201ENST00000351948 ZNF611Q8N823 705 aa12.79□□□□□ -0.36
SMC6-201ENST00000351948 GALNT6Q8NCL4 622 aa12.79□□□□□ -0.36
SMC6-201ENST00000351948 DAPP1Q9UN19 280 aa12.79□□□□□ -0.36
SMC6-201ENST00000351948 TET1Q8NFU7 2136 aa12.79□□□□□ -0.36
SMC6-201ENST00000351948 MOSPD3O75425 235 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms