RNA–Protein interactions for RNA: ENST00000351808.9

IFT88-202, Transcript of intraflagellar transport 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IFT88, Length 2,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-202ENST00000351808 TMEM38AQ9H6F2 299 aa12.39□□□□□ -0.43
IFT88-202ENST00000351808 GPN1Q9HCN4 374 aaPredicted RBP12.39□□□□□ -0.43
IFT88-202ENST00000351808 VPS29Q9UBQ0 182 aa12.39□□□□□ -0.43
IFT88-202ENST00000351808 PIKFYVEQ9Y2I7 2098 aa12.39□□□□□ -0.43
IFT88-202ENST00000351808 C5orf58C9J3I9 102 aa12.39□□□□□ -0.43
IFT88-202ENST00000351808 CLN5O75503 358 aa12.39□□□□□ -0.43
IFT88-202ENST00000351808 SLC25A12O75746 678 aa12.39□□□□□ -0.43
IFT88-202ENST00000351808 DDX6P26196 483 aaKnown RBP eCLIP12.39□□□□□ -0.43
IFT88-202ENST00000351808 BDKRB2P30411 391 aa12.39□□□□□ -0.43
IFT88-202ENST00000351808 RPIAP49247 311 aa12.39□□□□□ -0.43
IFT88-202ENST00000351808 FZD5Q13467 585 aa12.39□□□□□ -0.43
IFT88-202ENST00000351808 PODNL1Q6PEZ8 512 aa12.39□□□□□ -0.43
IFT88-202ENST00000351808 ZNF322Q6U7Q0 402 aaPredicted RBP12.39□□□□□ -0.43
IFT88-202ENST00000351808 UQCC3Q6UW78 93 aa12.39□□□□□ -0.43
IFT88-202ENST00000351808 LINGO2Q7L985 606 aa12.39□□□□□ -0.43
IFT88-202ENST00000351808 SP7Q8TDD2 431 aaPredicted RBP12.39□□□□□ -0.43
IFT88-202ENST00000351808 TMEM41AQ96HV5 264 aa12.39□□□□□ -0.43
IFT88-202ENST00000351808 TEFMQ96QE5 360 aaKnown RBP12.39□□□□□ -0.43
IFT88-202ENST00000351808 R3HDMLQ9H3Y0 253 aa12.39□□□□□ -0.43
IFT88-202ENST00000351808 ANGPT4Q9Y264 503 aa12.39□□□□□ -0.43
IFT88-202ENST00000351808 DMRT1Q9Y5R6 373 aa12.39□□□□□ -0.43
IFT88-202ENST00000351808 DOCK4Q8N1I0 1966 aa12.38□□□□□ -0.43
IFT88-202ENST00000351808 ANKRD31Q8N7Z5 1873 aa12.38□□□□□ -0.43
IFT88-202ENST00000351808 CARNS1A5YM72 827 aa12.38□□□□□ -0.43
IFT88-202ENST00000351808 C1orf196B1AJZ1 125 aa12.38□□□□□ -0.43
IFT88-202ENST00000351808 WASH3PC4AMC7 463 aa12.38□□□□□ -0.43
IFT88-202ENST00000351808 EIF4E2O60573 245 aaKnown RBP12.38□□□□□ -0.43
IFT88-202ENST00000351808 CH25HO95992 272 aa12.38□□□□□ -0.43
IFT88-202ENST00000351808 PAK4O96013 591 aaPredicted RBP12.38□□□□□ -0.43
IFT88-202ENST00000351808 ANXA4P09525 319 aaPredicted RBP12.38□□□□□ -0.43
IFT88-202ENST00000351808 ZNF44P15621 663 aa12.38□□□□□ -0.43
IFT88-202ENST00000351808 NDUFB7P17568 137 aa12.38□□□□□ -0.43
IFT88-202ENST00000351808 TBXA2RP21731 343 aa12.38□□□□□ -0.43
IFT88-202ENST00000351808 SRSF3P84103 164 aaKnown RBP12.38□□□□□ -0.43
IFT88-202ENST00000351808 ZNF630Q2M218 657 aaPredicted RBP12.38□□□□□ -0.43
IFT88-202ENST00000351808 DEFB115Q30KQ5 88 aa12.38□□□□□ -0.43
IFT88-202ENST00000351808 MS4A13Q5J8X5 152 aa12.38□□□□□ -0.43
IFT88-202ENST00000351808 TMEM71Q6P5X7 295 aa12.38□□□□□ -0.43
IFT88-202ENST00000351808 OR2W3Q7Z3T1 314 aa12.38□□□□□ -0.43
IFT88-202ENST00000351808 MISPQ8IVT2 679 aa12.38□□□□□ -0.43
IFT88-202ENST00000351808 SKA3Q8IX90 412 aa12.38□□□□□ -0.43
IFT88-202ENST00000351808 ZNF683Q8IZ20 524 aa12.38□□□□□ -0.43
IFT88-202ENST00000351808 ZSCAN1Q8NBB4 408 aa12.38□□□□□ -0.43
IFT88-202ENST00000351808 CHST13Q8NET6 341 aa12.38□□□□□ -0.43
IFT88-202ENST00000351808 GPR32P1Q8NGA4 272 aa12.38□□□□□ -0.43
IFT88-202ENST00000351808 OR4D11Q8NGI4 311 aa12.38□□□□□ -0.43
IFT88-202ENST00000351808 ZNF75AQ96N20 296 aa12.38□□□□□ -0.43
IFT88-202ENST00000351808 TDP1Q9NUW8 608 aa12.38□□□□□ -0.43
IFT88-202ENST00000351808 ASF1BQ9NVP2 202 aa12.38□□□□□ -0.43
IFT88-202ENST00000351808 CAMK2AQ9UQM7 478 aa12.38□□□□□ -0.43
IFT88-202ENST00000351808 RUVBL1Q9Y265 456 aaKnown RBP12.38□□□□□ -0.43
IFT88-202ENST00000351808 SLC22A14Q9Y267 594 aa12.38□□□□□ -0.43
IFT88-202ENST00000351808 DBX1A6NMT0 343 aa12.38□□□□□ -0.43
IFT88-202ENST00000351808 COLCA2A8K830 154 aa12.38□□□□□ -0.43
IFT88-202ENST00000351808 E7EQ34 232 aa12.38□□□□□ -0.43
IFT88-202ENST00000351808 F5H5P2 479 aa12.38□□□□□ -0.43
IFT88-202ENST00000351808 GOSR2O14653 212 aa12.38□□□□□ -0.43
IFT88-202ENST00000351808 ZDHHC11BP0C7U3 371 aa12.38□□□□□ -0.43
IFT88-202ENST00000351808 UBBP0CG47 229 aa12.38□□□□□ -0.43
IFT88-202ENST00000351808 UBCP0CG48 685 aaKnown RBP12.38□□□□□ -0.43
IFT88-202ENST00000351808 ART1P52961 327 aa12.38□□□□□ -0.43
IFT88-202ENST00000351808 RPS27AP62979 156 aaKnown RBP12.38□□□□□ -0.43
IFT88-202ENST00000351808 UBA52P62987 128 aaKnown RBP12.38□□□□□ -0.43
IFT88-202ENST00000351808 RELQ04864 619 aaPredicted RBP12.38□□□□□ -0.43
IFT88-202ENST00000351808 CHIT1Q13231 466 aa12.38□□□□□ -0.43
IFT88-202ENST00000351808 CLEC12AQ5QGZ9 265 aa12.38□□□□□ -0.43
IFT88-202ENST00000351808 TRIM40Q6P9F5 258 aa12.38□□□□□ -0.43
IFT88-202ENST00000351808 ARL9Q6T311 187 aa12.38□□□□□ -0.43
IFT88-202ENST00000351808 CEACAM19Q7Z692 300 aa12.38□□□□□ -0.43
IFT88-202ENST00000351808 SLC9B2Q86UD5 537 aa12.38□□□□□ -0.43
IFT88-202ENST00000351808 APOBEC4Q8WW27 367 aaKnown RBP12.38□□□□□ -0.43
IFT88-202ENST00000351808 ECHDC3Q96DC8 303 aa12.38□□□□□ -0.43
IFT88-202ENST00000351808 RHOVQ96L33 236 aa12.38□□□□□ -0.43
IFT88-202ENST00000351808 C8orf33Q9H7E9 229 aaPredicted RBP12.38□□□□□ -0.43
IFT88-202ENST00000351808 RDH14Q9HBH5 336 aa12.38□□□□□ -0.43
IFT88-202ENST00000351808 CSNK1G1Q9HCP0 422 aa12.38□□□□□ -0.43
IFT88-202ENST00000351808 ACSS1Q9NUB1 689 aaPredicted RBP12.38□□□□□ -0.43
IFT88-202ENST00000351808 KLK11Q9UBX7 282 aa12.38□□□□□ -0.43
IFT88-202ENST00000351808 PCDHB1Q9Y5F3 818 aa12.38□□□□□ -0.43
IFT88-202ENST00000351808 MGAT4DA6NG13 374 aa12.37□□□□□ -0.43
IFT88-202ENST00000351808 OR6C76A6NM76 312 aa12.37□□□□□ -0.43
IFT88-202ENST00000351808 OR2T1O43869 369 aa12.37□□□□□ -0.43
IFT88-202ENST00000351808 FMO6PO60774 539 aa12.37□□□□□ -0.43
IFT88-202ENST00000351808 SFTPCP11686 197 aa12.37□□□□□ -0.43
IFT88-202ENST00000351808 OR1E1P30953 314 aa12.37□□□□□ -0.43
IFT88-202ENST00000351808 LUMP51884 338 aaPredicted RBP12.37□□□□□ -0.43
IFT88-202ENST00000351808 PPIAP62937 165 aaKnown RBP12.37□□□□□ -0.43
IFT88-202ENST00000351808 PEA15Q15121 130 aa12.37□□□□□ -0.43
IFT88-202ENST00000351808 FBXL22Q6P050 247 aa12.37□□□□□ -0.43
IFT88-202ENST00000351808 FAM180BQ6P0A1 224 aa12.37□□□□□ -0.43
IFT88-202ENST00000351808 SCD5Q86SK9 330 aa12.37□□□□□ -0.43
IFT88-202ENST00000351808 IQCHQ86VS3 1027 aa12.37□□□□□ -0.43
IFT88-202ENST00000351808 SPATA2LQ8IUW3 424 aaPredicted RBP12.37□□□□□ -0.43
IFT88-202ENST00000351808 DCUN1D3Q8IWE4 304 aa12.37□□□□□ -0.43
IFT88-202ENST00000351808 ZBTB2Q8N680 514 aa12.37□□□□□ -0.43
IFT88-202ENST00000351808 OR52I2Q8NH67 350 aa12.37□□□□□ -0.43
IFT88-202ENST00000351808 FAM117AQ9C073 453 aa12.37□□□□□ -0.43
IFT88-202ENST00000351808 POLE3Q9NRF9 147 aa12.37□□□□□ -0.43
IFT88-202ENST00000351808 C2orf42Q9NWW7 574 aa12.37□□□□□ -0.43
IFT88-202ENST00000351808 A0A1W2PPK0 400 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms