RNA–Protein interactions for RNA: ENST00000349225.2

RLIM-202, Transcript of ring finger protein, LIM domain interacting, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RLIM, Length 3,478 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RLIM-202ENST00000349225 OR5M1Q8NGP8 315 aa13.3□□□□□ -0.28
RLIM-202ENST00000349225 CLP1Q92989 425 aaKnown RBP13.3□□□□□ -0.28
RLIM-202ENST00000349225 SEPT5Q99719 369 aaPredicted RBP13.3□□□□□ -0.28
RLIM-202ENST00000349225 LRRN3Q9H3W5 708 aa13.3□□□□□ -0.28
RLIM-202ENST00000349225 MYNNQ9NPC7 610 aa13.3□□□□□ -0.28
RLIM-202ENST00000349225 SIRT3Q9NTG7 399 aaPredicted RBP13.3□□□□□ -0.28
RLIM-202ENST00000349225 RNF181Q9P0P0 153 aa13.3□□□□□ -0.28
RLIM-202ENST00000349225 ZMIZ1Q9ULJ6 1067 aa13.3□□□□□ -0.28
RLIM-202ENST00000349225 GPR31O00270 319 aa13.3□□□□□ -0.28
RLIM-202ENST00000349225 PTHLHP12272 177 aa13.3□□□□□ -0.28
RLIM-202ENST00000349225 PSMA6P60900 246 aaKnown RBP13.3□□□□□ -0.28
RLIM-202ENST00000349225 MC2RQ01718 297 aa13.3□□□□□ -0.28
RLIM-202ENST00000349225 SCRN3Q0VDG4 424 aa13.3□□□□□ -0.28
RLIM-202ENST00000349225 STPG1Q5TH74 334 aa13.3□□□□□ -0.28
RLIM-202ENST00000349225 NAXDQ8IW45 347 aa13.3□□□□□ -0.28
RLIM-202ENST00000349225 SLITRK4Q8IW52 837 aa13.3□□□□□ -0.28
RLIM-202ENST00000349225 MED20Q9H944 212 aa13.3□□□□□ -0.28
RLIM-202ENST00000349225 KLK11Q9UBX7 282 aa13.3□□□□□ -0.28
RLIM-202ENST00000349225 PRKAG2Q9UGJ0 569 aa13.3□□□□□ -0.28
RLIM-202ENST00000349225 OR51B4Q9Y5P0 310 aa13.3□□□□□ -0.28
RLIM-202ENST00000349225 DOCK3Q8IZD9 2030 aa13.3□□□□□ -0.28
RLIM-202ENST00000349225 GSTZ1O43708 216 aaPredicted RBP13.3□□□□□ -0.28
RLIM-202ENST00000349225 ATG12O94817 140 aa13.3□□□□□ -0.28
RLIM-202ENST00000349225 PPP3CBP16298 524 aa13.3□□□□□ -0.28
RLIM-202ENST00000349225 CTSOP43234 321 aaPredicted RBP13.3□□□□□ -0.28
RLIM-202ENST00000349225 SMAD2Q15796 467 aaKnown RBP13.3□□□□□ -0.28
RLIM-202ENST00000349225 METTL11BQ5VVY1 283 aa13.3□□□□□ -0.28
RLIM-202ENST00000349225 ZNF740Q8NDX6 193 aa13.3□□□□□ -0.28
RLIM-202ENST00000349225 STK35Q8TDR2 534 aa13.3□□□□□ -0.28
RLIM-202ENST00000349225 THEM6Q8WUY1 208 aa13.3□□□□□ -0.28
RLIM-202ENST00000349225 SORCS1Q8WY21 1168 aa13.3□□□□□ -0.28
RLIM-202ENST00000349225 YIPF4Q9BSR8 244 aa13.3□□□□□ -0.28
RLIM-202ENST00000349225 HCAR1Q9BXC0 346 aa13.3□□□□□ -0.28
RLIM-202ENST00000349225 QRSL1Q9H0R6 528 aaKnown RBP13.3□□□□□ -0.28
RLIM-202ENST00000349225 MTG2Q9H4K7 406 aa13.3□□□□□ -0.28
RLIM-202ENST00000349225 BRD9Q9H8M2 597 aa13.3□□□□□ -0.28
RLIM-202ENST00000349225 ADARB2Q9NS39 739 aaKnown RBP13.3□□□□□ -0.28
RLIM-202ENST00000349225 EMC3Q9P0I2 261 aa13.3□□□□□ -0.28
RLIM-202ENST00000349225 NUP210Q8TEM1 1887 aaPredicted RBP13.3□□□□□ -0.28
RLIM-202ENST00000349225 FRS3O43559 492 aa13.29□□□□□ -0.28
RLIM-202ENST00000349225 CPN1P15169 458 aa13.29□□□□□ -0.28
RLIM-202ENST00000349225 HTR1FP30939 366 aa13.29□□□□□ -0.28
RLIM-202ENST00000349225 CORO1AP31146 461 aaKnown RBP13.29□□□□□ -0.28
RLIM-202ENST00000349225 UBE2MP61081 183 aaKnown RBP13.29□□□□□ -0.28
RLIM-202ENST00000349225 SLC3A1Q07837 685 aa13.29□□□□□ -0.28
RLIM-202ENST00000349225 SLC9B2Q86UD5 537 aa13.29□□□□□ -0.28
RLIM-202ENST00000349225 CBLN2Q8IUK8 224 aa13.29□□□□□ -0.28
RLIM-202ENST00000349225 OR4D10Q8NGI6 311 aa13.29□□□□□ -0.28
RLIM-202ENST00000349225 OR5W2Q8NH69 310 aa13.29□□□□□ -0.28
RLIM-202ENST00000349225 BBS10Q8TAM1 723 aa13.29□□□□□ -0.28
RLIM-202ENST00000349225 ABHD4Q8TB40 342 aa13.29□□□□□ -0.28
RLIM-202ENST00000349225 GANCQ8TET4 914 aa13.29□□□□□ -0.28
RLIM-202ENST00000349225 KAT2AQ92830 837 aa13.29□□□□□ -0.28
RLIM-202ENST00000349225 PGLYRP3Q96LB9 341 aa13.29□□□□□ -0.28
RLIM-202ENST00000349225 ALG8Q9BVK2 526 aa13.29□□□□□ -0.28
RLIM-202ENST00000349225 OR51I1Q9H343 314 aa13.29□□□□□ -0.28
RLIM-202ENST00000349225 DMRT3Q9NQL9 472 aa13.29□□□□□ -0.28
RLIM-202ENST00000349225 ZNF275Q9NSD4 429 aaPredicted RBP13.29□□□□□ -0.28
RLIM-202ENST00000349225 MLXQ9UH92 298 aa13.29□□□□□ -0.28
RLIM-202ENST00000349225 OPN4Q9UHM6 478 aa13.29□□□□□ -0.28
RLIM-202ENST00000349225 TINAGQ9UJW2 476 aa13.29□□□□□ -0.28
RLIM-202ENST00000349225 SLC16A5O15375 505 aa13.29□□□□□ -0.28
RLIM-202ENST00000349225 APOC1P02654 83 aa13.29□□□□□ -0.28
RLIM-202ENST00000349225 RAP2BP61225 183 aa13.29□□□□□ -0.28
RLIM-202ENST00000349225 LINC00303Q3SY05 128 aa13.29□□□□□ -0.28
RLIM-202ENST00000349225 DCAF12L2Q5VW00 463 aa13.29□□□□□ -0.28
RLIM-202ENST00000349225 ZC3H14Q6PJT7 736 aaKnown RBP13.29□□□□□ -0.28
RLIM-202ENST00000349225 CBARPQ8N350 705 aaPredicted RBP13.29□□□□□ -0.28
RLIM-202ENST00000349225 HDDC3Q8N4P3 179 aa13.29□□□□□ -0.28
RLIM-202ENST00000349225 PBX4Q9BYU1 374 aa13.29□□□□□ -0.28
RLIM-202ENST00000349225 ENKD1Q9H0I2 346 aa13.29□□□□□ -0.28
RLIM-202ENST00000349225 ELAC1Q9H777 363 aaKnown RBP13.29□□□□□ -0.28
RLIM-202ENST00000349225 NDRG3Q9UGV2 375 aa13.29□□□□□ -0.28
RLIM-202ENST00000349225 H7C2Y5 167 aa13.29□□□□□ -0.28
RLIM-202ENST00000349225 STC2O76061 302 aa13.29□□□□□ -0.28
RLIM-202ENST00000349225 IRF1P10914 325 aa13.29□□□□□ -0.28
RLIM-202ENST00000349225 IFNGR1P15260 489 aa13.29□□□□□ -0.28
RLIM-202ENST00000349225 AHRP35869 848 aa13.29□□□□□ -0.28
RLIM-202ENST00000349225 KCNJ3P48549 501 aa13.29□□□□□ -0.28
RLIM-202ENST00000349225 SLC11A2P49281 568 aa13.29□□□□□ -0.28
RLIM-202ENST00000349225 ZNF626Q68DY1 528 aa13.29□□□□□ -0.28
RLIM-202ENST00000349225 IKBIPQ70UQ0 350 aa13.29□□□□□ -0.28
RLIM-202ENST00000349225 C6orf120Q7Z4R8 191 aa13.29□□□□□ -0.28
RLIM-202ENST00000349225 LDLRAD3Q86YD5 345 aa13.29□□□□□ -0.28
RLIM-202ENST00000349225 CPOQ8IVL8 374 aa13.29□□□□□ -0.28
RLIM-202ENST00000349225 BOLLQ8N9W6 283 aaKnown RBP13.29□□□□□ -0.28
RLIM-202ENST00000349225 TMEM169Q96HH4 297 aa13.29□□□□□ -0.28
RLIM-202ENST00000349225 C7orf50Q9BRJ6 194 aaKnown RBP13.29□□□□□ -0.28
RLIM-202ENST00000349225 PIM2Q9P1W9 311 aa13.29□□□□□ -0.28
RLIM-202ENST00000349225 TRPV2Q9Y5S1 764 aa13.29□□□□□ -0.28
RLIM-202ENST00000349225 PQLC2LA1A4F0 135 aa13.28□□□□□ -0.28
RLIM-202ENST00000349225 NDUFS6O75380 124 aaKnown RBP13.28□□□□□ -0.28
RLIM-202ENST00000349225 ZNF821O75541 412 aaPredicted RBP13.28□□□□□ -0.28
RLIM-202ENST00000349225 ACVR1BP36896 505 aa13.28□□□□□ -0.28
RLIM-202ENST00000349225 OMPP47874 163 aa13.28□□□□□ -0.28
RLIM-202ENST00000349225 PREPP48147 710 aa13.28□□□□□ -0.28
RLIM-202ENST00000349225 SMIM11AP58511 58 aa13.28□□□□□ -0.28
RLIM-202ENST00000349225 HSPB3Q12988 150 aa13.28□□□□□ -0.28
RLIM-202ENST00000349225 C18orf63Q68DL7 685 aa13.28□□□□□ -0.28
RLIM-202ENST00000349225 MED27Q6P2C8 311 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms