RNA–Protein interactions for RNA: ENST00000337299.6

COL2A1-201, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL2A1, Length 4,257 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-201ENST00000337299 FATE1Q969F0 183 aa12.46□□□□□ -0.41
COL2A1-201ENST00000337299 RGMAQ96B86 450 aa12.46□□□□□ -0.41
COL2A1-201ENST00000337299 TRMT61AQ96FX7 289 aaKnown RBP12.46□□□□□ -0.41
COL2A1-201ENST00000337299 MRPS30Q9NP92 439 aaKnown RBP12.46□□□□□ -0.41
COL2A1-201ENST00000337299 PRELID3BQ9Y3B1 194 aa12.46□□□□□ -0.41
COL2A1-201ENST00000337299 THEGLP0DJG4 465 aa12.46□□□□□ -0.42
COL2A1-201ENST00000337299 DDX6P26196 483 aaKnown RBP eCLIP12.46□□□□□ -0.42
COL2A1-201ENST00000337299 OR3A2P47893 321 aa12.46□□□□□ -0.42
COL2A1-201ENST00000337299 LSSP48449 732 aa12.46□□□□□ -0.42
COL2A1-201ENST00000337299 OR10A3P58181 314 aa12.46□□□□□ -0.42
COL2A1-201ENST00000337299 LRIF1Q5T3J3 769 aa12.46□□□□□ -0.42
COL2A1-201ENST00000337299 ALG1LQ6GMV1 187 aa12.46□□□□□ -0.42
COL2A1-201ENST00000337299 ACSM5Q6NUN0 579 aa12.46□□□□□ -0.42
COL2A1-201ENST00000337299 TMUB2Q71RG4 321 aa12.46□□□□□ -0.42
COL2A1-201ENST00000337299 C10orf111Q8N326 155 aa12.46□□□□□ -0.42
COL2A1-201ENST00000337299 BRIX1Q8TDN6 353 aaKnown RBP12.46□□□□□ -0.42
COL2A1-201ENST00000337299 PPP1R14AQ96A00 147 aa12.46□□□□□ -0.42
COL2A1-201ENST00000337299 MICU1Q9BPX6 476 aa12.46□□□□□ -0.42
COL2A1-201ENST00000337299 DZANK1Q9NVP4 752 aa12.46□□□□□ -0.42
COL2A1-201ENST00000337299 FEZF1A0PJY2 475 aa12.45□□□□□ -0.42
COL2A1-201ENST00000337299 SLC22A31A6NKX4 558 aa12.45□□□□□ -0.42
COL2A1-201ENST00000337299 D6RAR5 112 aa12.45□□□□□ -0.42
COL2A1-201ENST00000337299 SNAPINO95295 136 aa12.45□□□□□ -0.42
COL2A1-201ENST00000337299 EOMESO95936 686 aa12.45□□□□□ -0.42
COL2A1-201ENST00000337299 PDZK1IP1Q13113 114 aa12.45□□□□□ -0.42
COL2A1-201ENST00000337299 GFOD2Q3B7J2 385 aa12.45□□□□□ -0.42
COL2A1-201ENST00000337299 CDNFQ49AH0 187 aa12.45□□□□□ -0.42
COL2A1-201ENST00000337299 TMEM107Q6UX40 140 aa12.45□□□□□ -0.42
COL2A1-201ENST00000337299 LHFPL5Q8TAF8 219 aa12.45□□□□□ -0.42
COL2A1-201ENST00000337299 SYNPRQ8TBG9 265 aa12.45□□□□□ -0.42
COL2A1-201ENST00000337299 SLC38A3Q99624 504 aa12.45□□□□□ -0.42
COL2A1-201ENST00000337299 SLC12A9Q9BXP2 914 aa12.45□□□□□ -0.42
COL2A1-201ENST00000337299 LRIT2A6NDA9 550 aa12.45□□□□□ -0.42
COL2A1-201ENST00000337299 ACOD1A6NK06 481 aa12.45□□□□□ -0.42
COL2A1-201ENST00000337299 SIGLEC5O15389 551 aa12.45□□□□□ -0.42
COL2A1-201ENST00000337299 PLA2G10O15496 165 aa12.45□□□□□ -0.42
COL2A1-201ENST00000337299 UBBP0CG47 229 aa12.45□□□□□ -0.42
COL2A1-201ENST00000337299 UBCP0CG48 685 aaKnown RBP12.45□□□□□ -0.42
COL2A1-201ENST00000337299 CSNK1DP48730 415 aa12.45□□□□□ -0.42
COL2A1-201ENST00000337299 SIGLEC14Q08ET2 396 aa12.45□□□□□ -0.42
COL2A1-201ENST00000337299 ZNF79Q15937 498 aa12.45□□□□□ -0.42
COL2A1-201ENST00000337299 UPP1Q16831 310 aa12.45□□□□□ -0.42
COL2A1-201ENST00000337299 C3orf38Q5JPI3 329 aa12.45□□□□□ -0.42
COL2A1-201ENST00000337299 CST9Q5W186 159 aa12.45□□□□□ -0.42
COL2A1-201ENST00000337299 TXNDC8Q6A555 127 aa12.45□□□□□ -0.42
COL2A1-201ENST00000337299 HEPHL1Q6MZM0 1159 aa12.45□□□□□ -0.42
COL2A1-201ENST00000337299 SSX9Q7RTT3 188 aa12.45□□□□□ -0.42
COL2A1-201ENST00000337299 PTOV1Q86YD1 416 aa12.45□□□□□ -0.42
COL2A1-201ENST00000337299 NPAS4Q8IUM7 802 aa12.45□□□□□ -0.42
COL2A1-201ENST00000337299 OR52E2Q8NGJ4 325 aa12.45□□□□□ -0.42
COL2A1-201ENST00000337299 OR10R2Q8NGX6 335 aa12.45□□□□□ -0.42
COL2A1-201ENST00000337299 C15orf40Q8WUR7 153 aa12.45□□□□□ -0.42
COL2A1-201ENST00000337299 NSMAFQ92636 917 aa12.45□□□□□ -0.42
COL2A1-201ENST00000337299 NEIL2Q969S2 332 aa12.45□□□□□ -0.42
COL2A1-201ENST00000337299 ARL5BQ96KC2 179 aa12.45□□□□□ -0.42
COL2A1-201ENST00000337299 SLC6A20Q9NP91 592 aa12.45□□□□□ -0.42
COL2A1-201ENST00000337299 TLR9Q9NR96 1032 aa12.45□□□□□ -0.42
COL2A1-201ENST00000337299 CREBZFQ9NS37 354 aa12.45□□□□□ -0.42
COL2A1-201ENST00000337299 SPATA6Q9NWH7 488 aaPredicted RBP12.45□□□□□ -0.42
COL2A1-201ENST00000337299 SLC6A14Q9UN76 642 aa12.45□□□□□ -0.42
COL2A1-201ENST00000337299 CCL16O15467 120 aa12.45□□□□□ -0.42
COL2A1-201ENST00000337299 UBXN7O94888 489 aa12.45□□□□□ -0.42
COL2A1-201ENST00000337299 CXCL3P19876 107 aa12.45□□□□□ -0.42
COL2A1-201ENST00000337299 Q5BKY6 102 aa12.45□□□□□ -0.42
COL2A1-201ENST00000337299 ZER1Q7Z7L7 766 aa12.45□□□□□ -0.42
COL2A1-201ENST00000337299 CMTM8Q8IZV2 173 aa12.45□□□□□ -0.42
COL2A1-201ENST00000337299 OR5M3Q8NGP4 307 aa12.45□□□□□ -0.42
COL2A1-201ENST00000337299 SLC7A13Q8TCU3 470 aa12.45□□□□□ -0.42
COL2A1-201ENST00000337299 THAP4Q8WY91 577 aa12.45□□□□□ -0.42
COL2A1-201ENST00000337299 BARHL1Q9BZE3 327 aa12.45□□□□□ -0.42
COL2A1-201ENST00000337299 RPH3AQ9Y2J0 694 aaPredicted RBP12.45□□□□□ -0.42
COL2A1-201ENST00000337299 EVPLQ92817 2033 aa12.45□□□□□ -0.42
COL2A1-201ENST00000337299 PTPRZ1P23471 2315 aaPredicted RBP12.45□□□□□ -0.42
COL2A1-201ENST00000337299 MARF1Q9Y4F3 1742 aaKnown RBP12.45□□□□□ -0.42
COL2A1-201ENST00000337299 TRDV1A0A1B0GX56 115 aa12.45□□□□□ -0.42
COL2A1-201ENST00000337299 RNASET2O00584 256 aaKnown RBP12.45□□□□□ -0.42
COL2A1-201ENST00000337299 RNF13O43567 381 aa12.45□□□□□ -0.42
COL2A1-201ENST00000337299 ELAVL4P26378 380 aaKnown RBP12.45□□□□□ -0.42
COL2A1-201ENST00000337299 AOAHP28039 575 aa12.45□□□□□ -0.42
COL2A1-201ENST00000337299 S100A12P80511 92 aa12.45□□□□□ -0.42
COL2A1-201ENST00000337299 LAIR1Q6GTX8 287 aa12.45□□□□□ -0.42
COL2A1-201ENST00000337299 TSSK4Q6SA08 328 aa12.45□□□□□ -0.42
COL2A1-201ENST00000337299 TMCO2Q7Z6W1 182 aaPredicted RBP12.45□□□□□ -0.42
COL2A1-201ENST00000337299 SLC38A5Q8WUX1 472 aa12.45□□□□□ -0.42
COL2A1-201ENST00000337299 DCUN1D4Q92564 292 aa12.45□□□□□ -0.42
COL2A1-201ENST00000337299 SSX3Q99909 188 aa12.45□□□□□ -0.42
COL2A1-201ENST00000337299 V9GYH0 126 aa12.45□□□□□ -0.42
COL2A1-201ENST00000337299 UNC119BA6NIH7 251 aa12.44□□□□□ -0.42
COL2A1-201ENST00000337299 XKRYO14609 159 aa12.44□□□□□ -0.42
COL2A1-201ENST00000337299 HBQ1P09105 142 aa12.44□□□□□ -0.42
COL2A1-201ENST00000337299 TACSTD2P09758 323 aa12.44□□□□□ -0.42
COL2A1-201ENST00000337299 CTRB1P17538 263 aa12.44□□□□□ -0.42
COL2A1-201ENST00000337299 IRF3Q14653 427 aa12.44□□□□□ -0.42
COL2A1-201ENST00000337299 FAM69AQ5T7M9 428 aa12.44□□□□□ -0.42
COL2A1-201ENST00000337299 CTRB2Q6GPI1 263 aa12.44□□□□□ -0.42
COL2A1-201ENST00000337299 SLC8B1Q6J4K2 584 aa12.44□□□□□ -0.42
COL2A1-201ENST00000337299 ARMC6Q6NXE6 501 aa12.44□□□□□ -0.42
COL2A1-201ENST00000337299 NDUFAF7Q7L592 441 aa12.44□□□□□ -0.42
COL2A1-201ENST00000337299 OR2L5Q8NG80 312 aa12.44□□□□□ -0.42
COL2A1-201ENST00000337299 OR5T2Q8NGG2 359 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms