RNA–Protein interactions for RNA: ENST00000308077.9

PTCD2-201, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 1 (best)

Gene PTCD2, Length 2,195 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-201ENST00000308077 MAN2C1Q9NTJ4 1040 aa6.42□□□□□ -1.38
PTCD2-201ENST00000308077 COPS7AQ9UBW8 275 aa6.42□□□□□ -1.38
PTCD2-201ENST00000308077 CFL2Q9Y281 166 aa6.42□□□□□ -1.38
PTCD2-201ENST00000308077 PTRH2Q9Y3E5 179 aaKnown RBP6.42□□□□□ -1.38
PTCD2-201ENST00000308077 FAM32AQ9Y421 112 aaKnown RBP6.42□□□□□ -1.38
PTCD2-201ENST00000308077 PCDHGA3Q9Y5H0 932 aa6.42□□□□□ -1.38
PTCD2-201ENST00000308077 PCSK5Q92824 1860 aa6.42□□□□□ -1.38
PTCD2-201ENST00000308077 CDHR4A6H8M9 788 aa6.41□□□□□ -1.38
PTCD2-201ENST00000308077 OR6C76A6NM76 312 aa6.41□□□□□ -1.38
PTCD2-201ENST00000308077 C9J4A7 227 aa6.41□□□□□ -1.38
PTCD2-201ENST00000308077 TO15178 435 aa6.41□□□□□ -1.38
PTCD2-201ENST00000308077 HS6ST1O60243 411 aa6.41□□□□□ -1.38
PTCD2-201ENST00000308077 GADD45GO95257 159 aa6.41□□□□□ -1.38
PTCD2-201ENST00000308077 NTN1O95631 604 aa6.41□□□□□ -1.38
PTCD2-201ENST00000308077 IL33O95760 270 aa6.41□□□□□ -1.38
PTCD2-201ENST00000308077 THY1P04216 161 aa6.41□□□□□ -1.38
PTCD2-201ENST00000308077 GNAO1P09471 354 aa6.41□□□□□ -1.38
PTCD2-201ENST00000308077 GKN3PP0CG01 181 aa6.41□□□□□ -1.38
PTCD2-201ENST00000308077 PRG2P13727 222 aa6.41□□□□□ -1.38
PTCD2-201ENST00000308077 NR0B1P51843 470 aaKnown RBP6.41□□□□□ -1.38
PTCD2-201ENST00000308077 RGS8P57771 180 aaPredicted RBP6.41□□□□□ -1.38
PTCD2-201ENST00000308077 RNF4P78317 190 aa6.41□□□□□ -1.38
PTCD2-201ENST00000308077 ADARB1P78563 741 aaKnown RBP6.41□□□□□ -1.38
PTCD2-201ENST00000308077 EIF3IQ13347 325 aaKnown RBP6.41□□□□□ -1.38
PTCD2-201ENST00000308077 SEC23BQ15437 767 aa6.41□□□□□ -1.38
PTCD2-201ENST00000308077 MICAQ29983 383 aa6.41□□□□□ -1.38
PTCD2-201ENST00000308077 SLC36A3Q495N2 470 aa6.41□□□□□ -1.38
PTCD2-201ENST00000308077 EIPR1Q53HC9 387 aa6.41□□□□□ -1.38
PTCD2-201ENST00000308077 FAHD1Q6P587 224 aa6.41□□□□□ -1.38
PTCD2-201ENST00000308077 SLC29A4Q7RTT9 530 aa6.41□□□□□ -1.38
PTCD2-201ENST00000308077 MARVELD2Q8N4S9 558 aa6.41□□□□□ -1.38
PTCD2-201ENST00000308077 PIK3C3Q8NEB9 887 aa6.41□□□□□ -1.38
PTCD2-201ENST00000308077 OR9Q2Q8NGE9 314 aa6.41□□□□□ -1.38
PTCD2-201ENST00000308077 OR2Y1Q8NGV0 311 aa6.41□□□□□ -1.38
PTCD2-201ENST00000308077 OR4C3Q8NH37 302 aa6.41□□□□□ -1.38
PTCD2-201ENST00000308077 WDR36Q8NI36 951 aaKnown RBP6.41□□□□□ -1.38
PTCD2-201ENST00000308077 GIPC3Q8TF64 312 aa6.41□□□□□ -1.38
PTCD2-201ENST00000308077 CT55Q8WUE5 264 aa6.41□□□□□ -1.38
PTCD2-201ENST00000308077 DIO2Q92813 273 aa6.41□□□□□ -1.38
PTCD2-201ENST00000308077 PRRC1Q96M27 445 aa6.41□□□□□ -1.38
PTCD2-201ENST00000308077 G6PC3Q9BUM1 346 aa6.41□□□□□ -1.38
PTCD2-201ENST00000308077 TOR3AQ9H497 397 aa6.41□□□□□ -1.38
PTCD2-201ENST00000308077 TRIM45Q9H8W5 580 aaPredicted RBP6.41□□□□□ -1.38
PTCD2-201ENST00000308077 ZNF232Q9UNY5 417 aa6.41□□□□□ -1.38
PTCD2-201ENST00000308077 DNHD1Q96M86 4753 aa6.41□□□□□ -1.38
PTCD2-201ENST00000308077 PTPRBP23467 1997 aa6.41□□□□□ -1.38
PTCD2-201ENST00000308077 LOC102723996A0A087X1L8 192 aa6.41□□□□□ -1.38
PTCD2-201ENST00000308077 TMEM200CA6NKL6 621 aa6.41□□□□□ -1.38
PTCD2-201ENST00000308077 CPSF4LA6NMK7 179 aaKnown RBP6.41□□□□□ -1.38
PTCD2-201ENST00000308077 ZNF354AO60765 605 aaPredicted RBP6.41□□□□□ -1.38
PTCD2-201ENST00000308077 ADAM11O75078 769 aa6.41□□□□□ -1.38
PTCD2-201ENST00000308077 CLIC3O95833 236 aa6.41□□□□□ -1.38
PTCD2-201ENST00000308077 H1F0P07305 194 aaKnown RBP6.41□□□□□ -1.38
PTCD2-201ENST00000308077 IGFBP5P24593 272 aa6.41□□□□□ -1.38
PTCD2-201ENST00000308077 HTR2AP28223 471 aa6.41□□□□□ -1.38
PTCD2-201ENST00000308077 ARHGDIAP52565 204 aa6.41□□□□□ -1.38
PTCD2-201ENST00000308077 LIMK1P53667 647 aa6.41□□□□□ -1.38
PTCD2-201ENST00000308077 ATP12AP54707 1039 aa6.41□□□□□ -1.38
PTCD2-201ENST00000308077 SLC26A5P58743 744 aa6.41□□□□□ -1.38
PTCD2-201ENST00000308077 DCAF7P61962 342 aa6.41□□□□□ -1.38
PTCD2-201ENST00000308077 RPS18P62269 152 aaKnown RBP6.41□□□□□ -1.38
PTCD2-201ENST00000308077 MED21Q13503 144 aa6.41□□□□□ -1.38
PTCD2-201ENST00000308077 FGFBP1Q14512 234 aa6.41□□□□□ -1.38
PTCD2-201ENST00000308077 DECR1Q16698 335 aa6.41□□□□□ -1.38
PTCD2-201ENST00000308077 ZNF770Q6IQ21 691 aaPredicted RBP6.41□□□□□ -1.38
PTCD2-201ENST00000308077 C16orf47Q6ZP98 133 aaPredicted RBP6.41□□□□□ -1.38
PTCD2-201ENST00000308077 GALNT5Q7Z7M9 940 aa6.41□□□□□ -1.38
PTCD2-201ENST00000308077 SLC5A8Q8N695 610 aa6.41□□□□□ -1.38
PTCD2-201ENST00000308077 ZNF614Q8N883 585 aa6.41□□□□□ -1.38
PTCD2-201ENST00000308077 OR10G2Q8NGC3 310 aa6.41□□□□□ -1.38
PTCD2-201ENST00000308077 CYGBQ8WWM9 190 aa6.41□□□□□ -1.38
PTCD2-201ENST00000308077 CNOT9Q92600 299 aaKnown RBP6.41□□□□□ -1.38
PTCD2-201ENST00000308077 CNBD2Q96M20 576 aa6.41□□□□□ -1.38
PTCD2-201ENST00000308077 ALPK1Q96QP1 1244 aa6.41□□□□□ -1.38
PTCD2-201ENST00000308077 FEVQ99581 238 aa6.41□□□□□ -1.38
PTCD2-201ENST00000308077 LPAR4Q99677 370 aa6.41□□□□□ -1.38
PTCD2-201ENST00000308077 NIPSNAP1Q9BPW8 284 aa6.41□□□□□ -1.38
PTCD2-201ENST00000308077 PSD2Q9BQI7 771 aa6.41□□□□□ -1.38
PTCD2-201ENST00000308077 ANKRD60Q9BZ19 345 aa6.41□□□□□ -1.38
PTCD2-201ENST00000308077 CACYBPQ9HB71 228 aaKnown RBP6.41□□□□□ -1.38
PTCD2-201ENST00000308077 KLHL28Q9NXS3 571 aa6.41□□□□□ -1.38
PTCD2-201ENST00000308077 DNAJB12Q9NXW2 375 aaKnown RBP6.41□□□□□ -1.38
PTCD2-201ENST00000308077 C19orf25Q9UFG5 118 aaPredicted RBP6.41□□□□□ -1.38
PTCD2-201ENST00000308077 SLC13A4Q9UKG4 626 aa6.41□□□□□ -1.38
PTCD2-201ENST00000308077 PADI1Q9ULC6 663 aa6.41□□□□□ -1.38
PTCD2-201ENST00000308077 HS3ST3B1Q9Y662 390 aa6.41□□□□□ -1.38
PTCD2-201ENST00000308077 IGHV1-45A0A0A0MS14 117 aa6.4□□□□□ -1.38
PTCD2-201ENST00000308077 TRBV11-1A0A0K0K1C0 115 aa6.4□□□□□ -1.38
PTCD2-201ENST00000308077 A0A1W2PRQ8 180 aa6.4□□□□□ -1.38
PTCD2-201ENST00000308077 SOCS6O14544 535 aa6.4□□□□□ -1.38
PTCD2-201ENST00000308077 TM4SF5O14894 197 aa6.4□□□□□ -1.38
PTCD2-201ENST00000308077 TSPAN2O60636 221 aa6.4□□□□□ -1.38
PTCD2-201ENST00000308077 CCNB2O95067 398 aa6.4□□□□□ -1.38
PTCD2-201ENST00000308077 UTS2O95399 124 aa6.4□□□□□ -1.38
PTCD2-201ENST00000308077 OXSR1O95747 527 aaPredicted RBP6.4□□□□□ -1.38
PTCD2-201ENST00000308077 CCNYL3P0C7X3 344 aa6.4□□□□□ -1.38
PTCD2-201ENST00000308077 CDK4P11802 303 aa6.4□□□□□ -1.38
PTCD2-201ENST00000308077 COX6A1P12074 109 aa6.4□□□□□ -1.38
PTCD2-201ENST00000308077 CYP4B1P13584 511 aa6.4□□□□□ -1.38
PTCD2-201ENST00000308077 ABCD3P28288 659 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms