RNA–Protein interactions for RNA: ENST00000295225.9

KCNIP3-201, Transcript of potassium voltage-gated channel interacting protein 3, humanhuman

TSL 1 (best) BASIC

Gene KCNIP3, Length 2,940 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3-201ENST00000295225 PXNP49023 591 aaPredicted RBP12.41□□□□□ -0.42
KCNIP3-201ENST00000295225 SLC16A1P53985 500 aa12.41□□□□□ -0.42
KCNIP3-201ENST00000295225 ABATP80404 500 aa12.41□□□□□ -0.42
KCNIP3-201ENST00000295225 HSDL2Q6YN16 418 aa12.41□□□□□ -0.42
KCNIP3-201ENST00000295225 GALNT12Q8IXK2 581 aa12.41□□□□□ -0.42
KCNIP3-201ENST00000295225 OR2L2Q8NH16 312 aa12.41□□□□□ -0.42
KCNIP3-201ENST00000295225 CNRIP1Q96F85 164 aaPredicted RBP12.41□□□□□ -0.42
KCNIP3-201ENST00000295225 AHCYL2Q96HN2 611 aaKnown RBP12.41□□□□□ -0.42
KCNIP3-201ENST00000295225 MND1Q9BWT6 205 aa12.41□□□□□ -0.42
KCNIP3-201ENST00000295225 ENKD1Q9H0I2 346 aa12.41□□□□□ -0.42
KCNIP3-201ENST00000295225 ISG20L2Q9H9L3 353 aaKnown RBP12.41□□□□□ -0.42
KCNIP3-201ENST00000295225 SPHK1Q9NYA1 384 aa12.41□□□□□ -0.42
KCNIP3-201ENST00000295225 NLKQ9UBE8 527 aa12.41□□□□□ -0.42
KCNIP3-201ENST00000295225 A0A1W2PPV9 198 aa12.4□□□□□ -0.42
KCNIP3-201ENST00000295225 ZNF860A6NHJ4 632 aa12.4□□□□□ -0.42
KCNIP3-201ENST00000295225 ZNF670-ZNF695F2Z2N8 137 aa12.4□□□□□ -0.42
KCNIP3-201ENST00000295225 SOCS6O14544 535 aa12.4□□□□□ -0.42
KCNIP3-201ENST00000295225 CPNE3O75131 537 aaKnown RBP12.4□□□□□ -0.42
KCNIP3-201ENST00000295225 RNF224P0DH78 156 aa12.4□□□□□ -0.42
KCNIP3-201ENST00000295225 COX5BP10606 129 aa12.4□□□□□ -0.42
KCNIP3-201ENST00000295225 P2RY2P41231 377 aa12.4□□□□□ -0.42
KCNIP3-201ENST00000295225 IL12RB1P42701 662 aa12.4□□□□□ -0.42
KCNIP3-201ENST00000295225 PCBP4P57723 403 aaKnown RBP12.4□□□□□ -0.42
KCNIP3-201ENST00000295225 TAS2R41P59536 307 aa12.4□□□□□ -0.42
KCNIP3-201ENST00000295225 MLF2Q15773 248 aaPredicted RBP12.4□□□□□ -0.42
KCNIP3-201ENST00000295225 TMEM31Q5JXX7 168 aa12.4□□□□□ -0.42
KCNIP3-201ENST00000295225 C19orf48Q6RUI8 117 aa12.4□□□□□ -0.42
KCNIP3-201ENST00000295225 SYT9Q86SS6 491 aa12.4□□□□□ -0.42
KCNIP3-201ENST00000295225 RAB43Q86YS6 212 aa12.4□□□□□ -0.42
KCNIP3-201ENST00000295225 BMPERQ8N8U9 685 aa12.4□□□□□ -0.42
KCNIP3-201ENST00000295225 OR8J1Q8NGP2 316 aa12.4□□□□□ -0.42
KCNIP3-201ENST00000295225 METTL21AQ8WXB1 218 aa12.4□□□□□ -0.42
KCNIP3-201ENST00000295225 MAGEB10Q96LZ2 347 aaPredicted RBP12.4□□□□□ -0.42
KCNIP3-201ENST00000295225 AMDHD1Q96NU7 426 aa12.4□□□□□ -0.42
KCNIP3-201ENST00000295225 CNOT2Q9NZN8 540 aaKnown RBP12.4□□□□□ -0.42
KCNIP3-201ENST00000295225 CA5BQ9Y2D0 317 aa12.4□□□□□ -0.42
KCNIP3-201ENST00000295225 RPL36Q9Y3U8 105 aaKnown RBP12.4□□□□□ -0.42
KCNIP3-201ENST00000295225 SLC22A7Q9Y694 548 aa12.4□□□□□ -0.42
KCNIP3-201ENST00000295225 A0A1W2PR48 441 aa12.4□□□□□ -0.42
KCNIP3-201ENST00000295225 HYKKA2RU49 373 aa12.4□□□□□ -0.42
KCNIP3-201ENST00000295225 PLA2G10O15496 165 aa12.4□□□□□ -0.42
KCNIP3-201ENST00000295225 AKR7A2O43488 359 aa12.4□□□□□ -0.42
KCNIP3-201ENST00000295225 DPM1O60762 260 aa12.4□□□□□ -0.42
KCNIP3-201ENST00000295225 MRPL3P09001 348 aaKnown RBP12.4□□□□□ -0.42
KCNIP3-201ENST00000295225 AHRP35869 848 aa12.4□□□□□ -0.42
KCNIP3-201ENST00000295225 KRT33BQ14525 404 aa12.4□□□□□ -0.42
KCNIP3-201ENST00000295225 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.4□□□□□ -0.42
KCNIP3-201ENST00000295225 TIMM50Q3ZCQ8 353 aa12.4□□□□□ -0.42
KCNIP3-201ENST00000295225 GARNL3Q5VVW2 1013 aa12.4□□□□□ -0.42
KCNIP3-201ENST00000295225 C12orf73Q69YU5 71 aa12.4□□□□□ -0.42
KCNIP3-201ENST00000295225 C5orf46Q6UWT4 87 aa12.4□□□□□ -0.42
KCNIP3-201ENST00000295225 ASB18Q6ZVZ8 466 aa12.4□□□□□ -0.42
KCNIP3-201ENST00000295225 CREB3L4Q8TEY5 395 aa12.4□□□□□ -0.42
KCNIP3-201ENST00000295225 TMEM255BQ8WV15 326 aa12.4□□□□□ -0.42
KCNIP3-201ENST00000295225 OR5P2Q8WZ92 322 aa12.4□□□□□ -0.42
KCNIP3-201ENST00000295225 CITED4Q96RK1 184 aa12.4□□□□□ -0.42
KCNIP3-201ENST00000295225 INSM2Q96T92 566 aaPredicted RBP12.4□□□□□ -0.42
KCNIP3-201ENST00000295225 AIF1LQ9BQI0 150 aa12.4□□□□□ -0.42
KCNIP3-201ENST00000295225 B3GAT2Q9NPZ5 323 aa12.4□□□□□ -0.42
KCNIP3-201ENST00000295225 FREM2Q5SZK8 3169 aa12.4□□□□□ -0.42
KCNIP3-201ENST00000295225 CNTRLQ7Z7A1 2325 aa12.39□□□□□ -0.43
KCNIP3-201ENST00000295225 FAM170BA6NMN3 283 aa12.39□□□□□ -0.43
KCNIP3-201ENST00000295225 GMDSO60547 372 aa12.39□□□□□ -0.43
KCNIP3-201ENST00000295225 MRPS14O60783 128 aaKnown RBP12.39□□□□□ -0.43
KCNIP3-201ENST00000295225 LINC00271P0C7V0 271 aa12.39□□□□□ -0.43
KCNIP3-201ENST00000295225 GKN3PP0CG01 181 aa12.39□□□□□ -0.43
KCNIP3-201ENST00000295225 HOXB6P17509 224 aaKnown RBP12.39□□□□□ -0.43
KCNIP3-201ENST00000295225 TBXA2RP21731 343 aa12.39□□□□□ -0.43
KCNIP3-201ENST00000295225 PPM1AP35813 382 aa12.39□□□□□ -0.43
KCNIP3-201ENST00000295225 BCL6P41182 706 aa12.39□□□□□ -0.43
KCNIP3-201ENST00000295225 SPCS3P61009 180 aa12.39□□□□□ -0.43
KCNIP3-201ENST00000295225 C1DQ13901 141 aaKnown RBP12.39□□□□□ -0.43
KCNIP3-201ENST00000295225 IL18Q14116 193 aa12.39□□□□□ -0.43
KCNIP3-201ENST00000295225 PDSS1Q5T2R2 415 aa12.39□□□□□ -0.43
KCNIP3-201ENST00000295225 LINC00299Q6ZSB3 139 aa12.39□□□□□ -0.43
KCNIP3-201ENST00000295225 LAPTM4BQ86VI4 370 aa12.39□□□□□ -0.43
KCNIP3-201ENST00000295225 ARL14Q8N4G2 192 aa12.39□□□□□ -0.43
KCNIP3-201ENST00000295225 PCNPQ8WW12 178 aaKnown RBP12.39□□□□□ -0.43
KCNIP3-201ENST00000295225 SMG7Q92540 1137 aaKnown RBP12.39□□□□□ -0.43
KCNIP3-201ENST00000295225 GTF3AQ92664 365 aaKnown RBP12.39□□□□□ -0.43
KCNIP3-201ENST00000295225 NDUFB11Q9NX14 153 aa12.39□□□□□ -0.43
KCNIP3-201ENST00000295225 WSB2Q9NYS7 404 aaPredicted RBP12.39□□□□□ -0.43
KCNIP3-201ENST00000295225 IFI30P13284 250 aa12.39□□□□□ -0.43
KCNIP3-201ENST00000295225 PTBP1P26599 531 aaKnown RBP eCLIP12.39□□□□□ -0.43
KCNIP3-201ENST00000295225 P2RY4P51582 365 aa12.39□□□□□ -0.43
KCNIP3-201ENST00000295225 ARHGAP15Q53QZ3 475 aa12.39□□□□□ -0.43
KCNIP3-201ENST00000295225 ZC3H14Q6PJT7 736 aaKnown RBP12.39□□□□□ -0.43
KCNIP3-201ENST00000295225 ZNF730Q6ZMV8 503 aa12.39□□□□□ -0.43
KCNIP3-201ENST00000295225 FAM92BQ6ZTR7 304 aa12.39□□□□□ -0.43
KCNIP3-201ENST00000295225 FJX1Q86VR8 437 aa12.39□□□□□ -0.43
KCNIP3-201ENST00000295225 KLBQ86Z14 1044 aa12.39□□□□□ -0.43
KCNIP3-201ENST00000295225 FRMD1Q8N878 549 aa12.39□□□□□ -0.43
KCNIP3-201ENST00000295225 CXorf40AQ8TE69 158 aa12.39□□□□□ -0.43
KCNIP3-201ENST00000295225 PIK3R3Q92569 461 aa12.39□□□□□ -0.43
KCNIP3-201ENST00000295225 CXorf40BQ96DE9 158 aa12.39□□□□□ -0.43
KCNIP3-201ENST00000295225 CCDC120Q96HB5 630 aa12.39□□□□□ -0.43
KCNIP3-201ENST00000295225 SENP5Q96HI0 755 aaPredicted RBP12.39□□□□□ -0.43
KCNIP3-201ENST00000295225 ZNF607Q96SK3 696 aa12.39□□□□□ -0.43
KCNIP3-201ENST00000295225 MGAT4BQ9UQ53 548 aa12.39□□□□□ -0.43
KCNIP3-201ENST00000295225 COL4A3Q01955 1670 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms