RNA–Protein interactions for RNA: ENST00000269318.9

CCDC40-201, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2 BASIC

Gene CCDC40, Length 1,970 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-201ENST00000269318 NNATQ16517 81 aa15.36■□□□□ 0.05
CCDC40-201ENST00000269318 SYT14P1Q58G82 188 aa15.36■□□□□ 0.05
CCDC40-201ENST00000269318 MEDAGQ5VYS4 303 aa15.36■□□□□ 0.05
CCDC40-201ENST00000269318 ZNF620Q6ZNG0 422 aa15.36■□□□□ 0.05
CCDC40-201ENST00000269318 TMPRSS9Q7Z410 1059 aa15.36■□□□□ 0.05
CCDC40-201ENST00000269318 ARHGAP22Q7Z5H3 698 aa15.36■□□□□ 0.05
CCDC40-201ENST00000269318 LSRQ86X29 649 aaPredicted RBP15.36■□□□□ 0.05
CCDC40-201ENST00000269318 MAML2Q8IZL2 1156 aaPredicted RBP15.36■□□□□ 0.05
CCDC40-201ENST00000269318 BCORP1Q8N888 145 aa15.36■□□□□ 0.05
CCDC40-201ENST00000269318 SENP5Q96HI0 755 aaPredicted RBP15.36■□□□□ 0.05
CCDC40-201ENST00000269318 ZNF559Q9BR84 538 aa15.36■□□□□ 0.05
CCDC40-201ENST00000269318 G6PC3Q9BUM1 346 aa15.36■□□□□ 0.05
CCDC40-201ENST00000269318 YIPF2Q9BWQ6 316 aa15.36■□□□□ 0.05
CCDC40-201ENST00000269318 FSCN3Q9NQT6 498 aa15.36■□□□□ 0.05
CCDC40-201ENST00000269318 C14orf105Q9NVL8 296 aa15.36■□□□□ 0.05
CCDC40-201ENST00000269318 TAS2R16Q9NYV7 291 aa15.36■□□□□ 0.05
CCDC40-201ENST00000269318 PRODH2Q9UF12 536 aa15.36■□□□□ 0.05
CCDC40-201ENST00000269318 SERTAD3Q9UJW9 196 aa15.36■□□□□ 0.05
CCDC40-201ENST00000269318 CBLCQ9ULV8 474 aa15.36■□□□□ 0.05
CCDC40-201ENST00000269318 RPL36Q9Y3U8 105 aaKnown RBP15.36■□□□□ 0.05
CCDC40-201ENST00000269318 CABIN1Q9Y6J0 2220 aa15.36■□□□□ 0.05
CCDC40-201ENST00000269318 TOX3O15405 576 aaPredicted RBP15.36■□□□□ 0.05
CCDC40-201ENST00000269318 BCL10O95999 233 aa15.36■□□□□ 0.05
CCDC40-201ENST00000269318 ATXN8OSP0DMR3 200 aa15.36■□□□□ 0.05
CCDC40-201ENST00000269318 DBTP11182 482 aaKnown RBP15.36■□□□□ 0.05
CCDC40-201ENST00000269318 CD36P16671 472 aa15.36■□□□□ 0.05
CCDC40-201ENST00000269318 ACAA2P42765 397 aaKnown RBP15.36■□□□□ 0.05
CCDC40-201ENST00000269318 RHAGQ02094 409 aa15.36■□□□□ 0.05
CCDC40-201ENST00000269318 FGFBP1Q14512 234 aa15.36■□□□□ 0.05
CCDC40-201ENST00000269318 TIGD6Q17RP2 521 aa15.36■□□□□ 0.05
CCDC40-201ENST00000269318 YOD1Q5VVQ6 348 aaPredicted RBP15.36■□□□□ 0.05
CCDC40-201ENST00000269318 TMEM71Q6P5X7 295 aa15.36■□□□□ 0.05
CCDC40-201ENST00000269318 ZNF613Q6PF04 617 aa15.36■□□□□ 0.05
CCDC40-201ENST00000269318 ZNF574Q6ZN55 896 aaPredicted RBP15.36■□□□□ 0.05
CCDC40-201ENST00000269318 C11orf74Q86VG3 221 aa15.36■□□□□ 0.05
CCDC40-201ENST00000269318 RNF113BQ8IZP6 322 aaKnown RBP15.36■□□□□ 0.05
CCDC40-201ENST00000269318 TBC1D15Q8TC07 691 aa15.36■□□□□ 0.05
CCDC40-201ENST00000269318 TMEM239Q8WW34 195 aa15.36■□□□□ 0.05
CCDC40-201ENST00000269318 TSLPQ969D9 159 aa15.36■□□□□ 0.05
CCDC40-201ENST00000269318 SLC35B4Q969S0 331 aa15.36■□□□□ 0.05
CCDC40-201ENST00000269318 ARSGQ96EG1 525 aa15.36■□□□□ 0.05
CCDC40-201ENST00000269318 CRELD1Q96HD1 420 aa15.36■□□□□ 0.05
CCDC40-201ENST00000269318 FGF21Q9NSA1 209 aa15.36■□□□□ 0.05
CCDC40-201ENST00000269318 A0A0B4J2E0 115 aa15.35■□□□□ 0.05
CCDC40-201ENST00000269318 A0A1B0GX12 115 aa15.35■□□□□ 0.05
CCDC40-201ENST00000269318 SLC22A1O15245 554 aa15.35■□□□□ 0.05
CCDC40-201ENST00000269318 ATP12AP54707 1039 aa15.35■□□□□ 0.05
CCDC40-201ENST00000269318 SLC37A1P57057 533 aa15.35■□□□□ 0.05
CCDC40-201ENST00000269318 NR0B2Q15466 257 aa15.35■□□□□ 0.05
CCDC40-201ENST00000269318 SNAPC1Q16533 368 aa15.35■□□□□ 0.05
CCDC40-201ENST00000269318 CPEB4Q17RY0 729 aaKnown RBP eCLIP15.35■□□□□ 0.05
CCDC40-201ENST00000269318 HLA-BQ31612 363 aa15.35■□□□□ 0.05
CCDC40-201ENST00000269318 GUSBP11Q6P575 273 aa15.35■□□□□ 0.05
CCDC40-201ENST00000269318 CLDN22Q8N7P3 220 aa15.35■□□□□ 0.05
CCDC40-201ENST00000269318 ZNF614Q8N883 585 aa15.35■□□□□ 0.05
CCDC40-201ENST00000269318 ZNF321PQ8N8H1 164 aa15.35■□□□□ 0.05
CCDC40-201ENST00000269318 OR4Q3Q8NH05 313 aa15.35■□□□□ 0.05
CCDC40-201ENST00000269318 TMEM163Q8TC26 289 aa15.35■□□□□ 0.05
CCDC40-201ENST00000269318 OSTF1Q92882 214 aa15.35■□□□□ 0.05
CCDC40-201ENST00000269318 LRR1Q96L50 414 aa15.35■□□□□ 0.05
CCDC40-201ENST00000269318 ZNF582Q96NG8 517 aaPredicted RBP15.35■□□□□ 0.05
CCDC40-201ENST00000269318 TSSK6Q9BXA6 273 aa15.35■□□□□ 0.05
CCDC40-201ENST00000269318 ZNF304Q9HCX3 659 aa15.35■□□□□ 0.05
CCDC40-201ENST00000269318 KRCC1Q9NPI7 259 aaPredicted RBP15.35■□□□□ 0.05
CCDC40-201ENST00000269318 ST6GALNAC1Q9NSC7 600 aaPredicted RBP15.35■□□□□ 0.05
CCDC40-201ENST00000269318 FLRT3Q9NZU0 649 aa15.35■□□□□ 0.05
CCDC40-201ENST00000269318 CDH10Q9Y6N8 788 aa15.35■□□□□ 0.05
CCDC40-201ENST00000269318 RP1P56715 2156 aa15.35■□□□□ 0.05
CCDC40-201ENST00000269318 A0A1B0GX78 115 aa15.35■□□□□ 0.05
CCDC40-201ENST00000269318 PTNP21246 168 aa15.35■□□□□ 0.05
CCDC40-201ENST00000269318 FBLP22087 321 aaKnown RBP15.35■□□□□ 0.05
CCDC40-201ENST00000269318 PSMD4P55036 377 aaKnown RBP15.35■□□□□ 0.05
CCDC40-201ENST00000269318 NCF4Q15080 339 aa15.35■□□□□ 0.05
CCDC40-201ENST00000269318 ZSWIM7Q19AV6 140 aa15.35■□□□□ 0.05
CCDC40-201ENST00000269318 CLEC12AQ5QGZ9 265 aa15.35■□□□□ 0.05
CCDC40-201ENST00000269318 PERM1Q5SV97 790 aa15.35■□□□□ 0.05
CCDC40-201ENST00000269318 PEAR1Q5VY43 1037 aaPredicted RBP15.35■□□□□ 0.05
CCDC40-201ENST00000269318 ZNF367Q7RTV3 350 aa15.35■□□□□ 0.05
CCDC40-201ENST00000269318 PFN4Q8NHR9 129 aa15.35■□□□□ 0.05
CCDC40-201ENST00000269318 PNO1Q9NRX1 252 aaKnown RBP15.35■□□□□ 0.05
CCDC40-201ENST00000269318 C20orf141Q9NUB4 165 aa15.35■□□□□ 0.05
CCDC40-201ENST00000269318 ATXN7L1Q9ULK2 861 aaPredicted RBP15.35■□□□□ 0.05
CCDC40-201ENST00000269318 OR10H1Q9Y4A9 318 aa15.35■□□□□ 0.05
CCDC40-201ENST00000269318 UNC13CQ8NB66 2214 aa15.34■□□□□ 0.05
CCDC40-201ENST00000269318 TCRBV16S1A1N1A0A5B0 115 aa15.34■□□□□ 0.05
CCDC40-201ENST00000269318 LAMTOR5O43504 91 aa15.34■□□□□ 0.05
CCDC40-201ENST00000269318 SIGLEC6O43699 453 aa15.34■□□□□ 0.05
CCDC40-201ENST00000269318 IGKV3-11P04433 115 aa15.34■□□□□ 0.05
CCDC40-201ENST00000269318 PRKCDQ05655 676 aa15.34■□□□□ 0.05
CCDC40-201ENST00000269318 SIGLEC14Q08ET2 396 aa15.34■□□□□ 0.05
CCDC40-201ENST00000269318 DOC2BQ14184 412 aa15.34■□□□□ 0.05
CCDC40-201ENST00000269318 MINDY4Q4G0A6 757 aa15.34■□□□□ 0.05
CCDC40-201ENST00000269318 SLC46A3Q7Z3Q1 461 aa15.34■□□□□ 0.05
CCDC40-201ENST00000269318 TMEM151BQ8IW70 566 aa15.34■□□□□ 0.05
CCDC40-201ENST00000269318 LSMEM1Q8N8F7 131 aa15.34■□□□□ 0.05
CCDC40-201ENST00000269318 OR4C3Q8NH37 302 aa15.34■□□□□ 0.05
CCDC40-201ENST00000269318 PIGKQ92643 395 aa15.34■□□□□ 0.05
CCDC40-201ENST00000269318 EDAQ92838 391 aa15.34■□□□□ 0.05
CCDC40-201ENST00000269318 TMEM27Q9HBJ8 222 aa15.34■□□□□ 0.05
CCDC40-201ENST00000269318 TBC1D23Q9NUY8 699 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms