RNA–Protein interactions for RNA: ENST00000265077.7

VCAN-201, Transcript of versican, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VCAN, Length 12,625 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-201ENST00000265077 BRF2Q9HAW0 419 aa5.4□□□□□ -1.54
VCAN-201ENST00000265077 ABI3Q9P2A4 366 aa5.4□□□□□ -1.54
VCAN-201ENST00000265077 WRAP73Q9P2S5 460 aaPredicted RBP5.4□□□□□ -1.54
VCAN-201ENST00000265077 DNMT3AQ9Y6K1 912 aaPredicted RBP5.4□□□□□ -1.54
VCAN-201ENST00000265077 SLC22A31A6NKX4 558 aa5.4□□□□□ -1.54
VCAN-201ENST00000265077 NPIPA5E9PKD4 350 aa5.4□□□□□ -1.54
VCAN-201ENST00000265077 SEPT4O43236 478 aa5.4□□□□□ -1.54
VCAN-201ENST00000265077 KDELR2P33947 212 aa5.4□□□□□ -1.54
VCAN-201ENST00000265077 BMPR1AP36894 532 aa5.4□□□□□ -1.54
VCAN-201ENST00000265077 HERV-K104P61576 105 aa5.4□□□□□ -1.54
VCAN-201ENST00000265077 UNC50Q53HI1 259 aa5.4□□□□□ -1.54
VCAN-201ENST00000265077 GPR139Q6DWJ6 353 aa5.4□□□□□ -1.54
VCAN-201ENST00000265077 SERPINA11Q86U17 422 aa5.4□□□□□ -1.54
VCAN-201ENST00000265077 SLC22A15Q8IZD6 547 aa5.4□□□□□ -1.54
VCAN-201ENST00000265077 OR5AK3PQ8NH89 298 aa5.4□□□□□ -1.54
VCAN-201ENST00000265077 TRMT61BQ9BVS5 477 aaKnown RBP5.4□□□□□ -1.54
VCAN-201ENST00000265077 FBXL2Q9UKC9 423 aa5.4□□□□□ -1.54
VCAN-201ENST00000265077 NPIPA1Q9UND3 350 aa5.4□□□□□ -1.54
VCAN-201ENST00000265077 SPG11Q96JI7 2443 aa5.4□□□□□ -1.54
VCAN-201ENST00000265077 ANKUB1A6NFN9 424 aa5.4□□□□□ -1.54
VCAN-201ENST00000265077 GGT3PA6NGU5 568 aa5.4□□□□□ -1.54
VCAN-201ENST00000265077 TMX2-CTNND1H3BSU7 103 aa5.4□□□□□ -1.54
VCAN-201ENST00000265077 BCHEP06276 602 aa5.4□□□□□ -1.54
VCAN-201ENST00000265077 CD1EP15812 388 aa5.4□□□□□ -1.54
VCAN-201ENST00000265077 FGF7P21781 194 aa5.4□□□□□ -1.54
VCAN-201ENST00000265077 GGT2P36268 569 aa5.4□□□□□ -1.54
VCAN-201ENST00000265077 RFC3P40938 356 aa5.4□□□□□ -1.54
VCAN-201ENST00000265077 FABP9Q0Z7S8 132 aa5.4□□□□□ -1.54
VCAN-201ENST00000265077 KEAP1Q14145 624 aa5.4□□□□□ -1.54
VCAN-201ENST00000265077 RCAN2Q14206 197 aa5.4□□□□□ -1.54
VCAN-201ENST00000265077 EEF1AKMT2Q5JPI9 291 aaKnown RBP5.4□□□□□ -1.54
VCAN-201ENST00000265077 UQCC3Q6UW78 93 aa5.4□□□□□ -1.54
VCAN-201ENST00000265077 MCEMP1Q8IX19 187 aa5.4□□□□□ -1.54
VCAN-201ENST00000265077 MYLIPQ8WY64 445 aa5.4□□□□□ -1.54
VCAN-201ENST00000265077 MOCOSQ96EN8 888 aa5.4□□□□□ -1.54
VCAN-201ENST00000265077 MRGPRX2Q96LB1 330 aa5.4□□□□□ -1.54
VCAN-201ENST00000265077 ELF4Q99607 663 aaPredicted RBP5.4□□□□□ -1.54
VCAN-201ENST00000265077 NAV3Q8IVL0 2385 aa5.4□□□□□ -1.54
VCAN-201ENST00000265077 C13orf42A0A1B0GVH6 325 aa5.4□□□□□ -1.54
VCAN-201ENST00000265077 CBLP22681 906 aa5.4□□□□□ -1.54
VCAN-201ENST00000265077 VIPR1P32241 457 aa5.4□□□□□ -1.54
VCAN-201ENST00000265077 RANP62826 216 aaKnown RBP5.4□□□□□ -1.54
VCAN-201ENST00000265077 KCNJ10P78508 379 aa5.4□□□□□ -1.54
VCAN-201ENST00000265077 HNF4GQ14541 408 aa5.4□□□□□ -1.54
VCAN-201ENST00000265077 PDGFRLQ15198 375 aa5.4□□□□□ -1.54
VCAN-201ENST00000265077 AGTRAPQ6RW13 159 aa5.4□□□□□ -1.54
VCAN-201ENST00000265077 TPRG1Q6ZUI0 275 aa5.4□□□□□ -1.54
VCAN-201ENST00000265077 B3GNT8Q7Z7M8 397 aa5.4□□□□□ -1.54
VCAN-201ENST00000265077 MFSD4AQ8N468 514 aa5.4□□□□□ -1.54
VCAN-201ENST00000265077 ACBD7Q8N6N7 88 aa5.4□□□□□ -1.54
VCAN-201ENST00000265077 PLPP5Q8NEB5 264 aa5.4□□□□□ -1.54
VCAN-201ENST00000265077 ACTRT3Q9BYD9 372 aa5.4□□□□□ -1.54
VCAN-201ENST00000265077 SLC2A6Q9UGQ3 507 aa5.4□□□□□ -1.54
VCAN-201ENST00000265077 SOX14O95416 240 aa5.4□□□□□ -1.54
VCAN-201ENST00000265077 PDYNP01213 254 aa5.4□□□□□ -1.54
VCAN-201ENST00000265077 IL1AP01583 271 aa5.4□□□□□ -1.54
VCAN-201ENST00000265077 DRD5P21918 477 aa5.4□□□□□ -1.54
VCAN-201ENST00000265077 GNMTQ14749 295 aa5.4□□□□□ -1.54
VCAN-201ENST00000265077 ZNF691Q5VV52 312 aa5.4□□□□□ -1.54
VCAN-201ENST00000265077 CDHR3Q6ZTQ4 885 aa5.4□□□□□ -1.54
VCAN-201ENST00000265077 C12orf40Q86WS4 652 aa5.4□□□□□ -1.54
VCAN-201ENST00000265077 TMEM145Q8NBT3 493 aa5.4□□□□□ -1.54
VCAN-201ENST00000265077 OR56A3Q8NH54 315 aa5.4□□□□□ -1.54
VCAN-201ENST00000265077 HLA-CQ95604 372 aa5.4□□□□□ -1.54
VCAN-201ENST00000265077 CPNE7Q9UBL6 633 aa5.4□□□□□ -1.54
VCAN-201ENST00000265077 FBXL3Q9UKT7 428 aa5.4□□□□□ -1.54
VCAN-201ENST00000265077 WDR45Q9Y484 360 aa5.4□□□□□ -1.54
VCAN-201ENST00000265077 ARPC1BO15143 372 aaKnown RBP5.4□□□□□ -1.55
VCAN-201ENST00000265077 TGFB1P01137 390 aa5.4□□□□□ -1.55
VCAN-201ENST00000265077 STSP08842 583 aa5.4□□□□□ -1.55
VCAN-201ENST00000265077 RBMS1P29558 406 aaKnown RBP5.4□□□□□ -1.55
VCAN-201ENST00000265077 ACTR1BP42025 376 aa5.4□□□□□ -1.55
VCAN-201ENST00000265077 TNK1Q13470 666 aa5.4□□□□□ -1.55
VCAN-201ENST00000265077 MS4A13Q5J8X5 152 aa5.4□□□□□ -1.55
VCAN-201ENST00000265077 PLAG1Q6DJT9 500 aa5.4□□□□□ -1.55
VCAN-201ENST00000265077 ZNF559Q9BR84 538 aa5.4□□□□□ -1.55
VCAN-201ENST00000265077 TCEAL2Q9H3H9 227 aaPredicted RBP5.4□□□□□ -1.55
VCAN-201ENST00000265077 POT1Q9NUX5 634 aa5.4□□□□□ -1.55
VCAN-201ENST00000265077 GRHPRQ9UBQ7 328 aa5.4□□□□□ -1.55
VCAN-201ENST00000265077 TRBV2A0A0J9YWF9 115 aa5.4□□□□□ -1.55
VCAN-201ENST00000265077 KCNK2O95069 426 aa5.4□□□□□ -1.55
VCAN-201ENST00000265077 FDXRP22570 491 aa5.4□□□□□ -1.55
VCAN-201ENST00000265077 PCGF2P35227 344 aa5.4□□□□□ -1.55
VCAN-201ENST00000265077 MLLT10P55197 1068 aa5.4□□□□□ -1.55
VCAN-201ENST00000265077 SLAMF1Q13291 335 aa5.4□□□□□ -1.55
VCAN-201ENST00000265077 ARHGAP11BQ3KRB8 267 aa5.4□□□□□ -1.55
VCAN-201ENST00000265077 HEPHL1Q6MZM0 1159 aa5.4□□□□□ -1.55
VCAN-201ENST00000265077 TMEM65Q6PI78 240 aa5.4□□□□□ -1.55
VCAN-201ENST00000265077 C15orf39Q6ZRI6 1047 aa5.4□□□□□ -1.55
VCAN-201ENST00000265077 HIST2H3AQ71DI3 136 aa5.4□□□□□ -1.55
VCAN-201ENST00000265077 VTCN1Q7Z7D3 282 aa5.4□□□□□ -1.55
VCAN-201ENST00000265077 KRTCAP2Q8N6L1 136 aa5.4□□□□□ -1.55
VCAN-201ENST00000265077 SLC5A7Q9GZV3 580 aa5.4□□□□□ -1.55
VCAN-201ENST00000265077 METTL9Q9H1A3 318 aa5.4□□□□□ -1.55
VCAN-201ENST00000265077 MEPEQ9NQ76 525 aaPredicted RBP5.4□□□□□ -1.55
VCAN-201ENST00000265077 INPP5EQ9NRR6 644 aa5.4□□□□□ -1.55
VCAN-201ENST00000265077 PRODH2Q9UF12 536 aa5.4□□□□□ -1.55
VCAN-201ENST00000265077 Q9Y3F1 56 aa5.4□□□□□ -1.55
VCAN-201ENST00000265077 C2orf92A0A1B0GVN3 265 aa5.4□□□□□ -1.55
VCAN-201ENST00000265077 ARVCFO00192 962 aa5.4□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms