RNA–Protein interactions for RNA: ENST00000263398.10

CD44-201, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 4,589 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-201ENST00000263398 INPP5EQ9NRR6 644 aa10.12□□□□□ -0.79
CD44-201ENST00000263398 CD300AQ9UGN4 299 aa10.12□□□□□ -0.79
CD44-201ENST00000263398 N4BP2Q86UW6 1770 aaPredicted RBP10.12□□□□□ -0.79
CD44-201ENST00000263398 HMX3A6NHT5 357 aa10.11□□□□□ -0.79
CD44-201ENST00000263398 EEF1E1-BLOC1S5C9J1V9 151 aa10.11□□□□□ -0.79
CD44-201ENST00000263398 EGFP01133 1207 aa10.11□□□□□ -0.79
CD44-201ENST00000263398 C1SP09871 688 aa10.11□□□□□ -0.79
CD44-201ENST00000263398 CD34P28906 385 aa10.11□□□□□ -0.79
CD44-201ENST00000263398 CRABP1P29762 137 aa10.11□□□□□ -0.79
CD44-201ENST00000263398 SSTR4P31391 388 aa10.11□□□□□ -0.79
CD44-201ENST00000263398 RGS19P49795 217 aa10.11□□□□□ -0.79
CD44-201ENST00000263398 TDGQ13569 410 aa10.11□□□□□ -0.79
CD44-201ENST00000263398 PCGF3Q3KNV8 242 aa10.11□□□□□ -0.79
CD44-201ENST00000263398 PARP16Q8N5Y8 322 aa10.11□□□□□ -0.79
CD44-201ENST00000263398 HORMAD2Q8N7B1 307 aa10.11□□□□□ -0.79
CD44-201ENST00000263398 ADAMTS14Q8WXS8 1223 aa10.11□□□□□ -0.79
CD44-201ENST00000263398 COQ10AQ96MF6 247 aa10.11□□□□□ -0.79
CD44-201ENST00000263398 WDR83Q9BRX9 315 aaKnown RBP10.11□□□□□ -0.79
CD44-201ENST00000263398 ADAM29Q9UKF5 820 aa10.11□□□□□ -0.79
CD44-201ENST00000263398 LOC105369274A0A096LPK9 316 aa10.11□□□□□ -0.79
CD44-201ENST00000263398 DIRAS3O95661 229 aa10.11□□□□□ -0.79
CD44-201ENST00000263398 ACP2P11117 423 aa10.11□□□□□ -0.79
CD44-201ENST00000263398 UBL4AP11441 157 aa10.11□□□□□ -0.79
CD44-201ENST00000263398 ARSAP15289 507 aa10.11□□□□□ -0.79
CD44-201ENST00000263398 PBX2P40425 430 aa10.11□□□□□ -0.79
CD44-201ENST00000263398 NR4A2P43354 598 aa10.11□□□□□ -0.79
CD44-201ENST00000263398 HOXC5Q00444 222 aa10.11□□□□□ -0.79
CD44-201ENST00000263398 ZNF704Q6ZNC4 412 aaPredicted RBP10.11□□□□□ -0.79
CD44-201ENST00000263398 RTL10Q7L3V2 364 aa10.11□□□□□ -0.79
CD44-201ENST00000263398 LAS2Q8IYD9 372 aa10.11□□□□□ -0.79
CD44-201ENST00000263398 OR4N4Q8N0Y3 316 aa10.11□□□□□ -0.79
CD44-201ENST00000263398 ZNF709Q8N972 641 aa10.11□□□□□ -0.79
CD44-201ENST00000263398 KLHDC9Q8NEP7 349 aa10.11□□□□□ -0.79
CD44-201ENST00000263398 SLC7A13Q8TCU3 470 aa10.11□□□□□ -0.79
CD44-201ENST00000263398 ZDHHC1Q8WTX9 485 aa10.11□□□□□ -0.79
CD44-201ENST00000263398 ZNF587Q96SQ5 575 aaPredicted RBP10.11□□□□□ -0.79
CD44-201ENST00000263398 EVA1AQ9H8M9 152 aa10.11□□□□□ -0.79
CD44-201ENST00000263398 SYNPO2LQ9H987 977 aa10.11□□□□□ -0.79
CD44-201ENST00000263398 PARPBPQ9NWS1 579 aa10.11□□□□□ -0.79
CD44-201ENST00000263398 RARRES3Q9UL19 164 aa10.11□□□□□ -0.79
CD44-201ENST00000263398 KLK4Q9Y5K2 254 aa10.11□□□□□ -0.79
CD44-201ENST00000263398 KIAA0100Q14667 2235 aaKnown RBP10.11□□□□□ -0.79
CD44-201ENST00000263398 PIGBOS1A0A0B4J2F0 54 aa10.11□□□□□ -0.79
CD44-201ENST00000263398 ZNF850A8MQ14 1090 aa10.11□□□□□ -0.79
CD44-201ENST00000263398 HHLA1C9JL84 531 aa10.11□□□□□ -0.79
CD44-201ENST00000263398 TIMP1P01033 207 aa10.11□□□□□ -0.79
CD44-201ENST00000263398 JMJD7P0C870 316 aa10.11□□□□□ -0.79
CD44-201ENST00000263398 AHRP35869 848 aa10.11□□□□□ -0.79
CD44-201ENST00000263398 KCNJ5P48544 419 aa10.11□□□□□ -0.79
CD44-201ENST00000263398 POU3F4P49335 361 aa10.11□□□□□ -0.79
CD44-201ENST00000263398 SGSHP51688 502 aa10.11□□□□□ -0.79
CD44-201ENST00000263398 CYCSP99999 105 aaKnown RBP10.11□□□□□ -0.79
CD44-201ENST00000263398 DCST2Q5T1A1 773 aa10.11□□□□□ -0.79
CD44-201ENST00000263398 FCRLBQ6BAA4 426 aa10.11□□□□□ -0.79
CD44-201ENST00000263398 MFSD8Q8NHS3 518 aa10.11□□□□□ -0.79
CD44-201ENST00000263398 CDS1Q92903 461 aa10.11□□□□□ -0.79
CD44-201ENST00000263398 ELMOD3Q96FG2 381 aa10.11□□□□□ -0.79
CD44-201ENST00000263398 TIMM29Q9BSF4 260 aa10.11□□□□□ -0.79
CD44-201ENST00000263398 CXCL16Q9H2A7 254 aa10.11□□□□□ -0.79
CD44-201ENST00000263398 OR51J1Q9H342 316 aa10.11□□□□□ -0.79
CD44-201ENST00000263398 SUSD2Q9UGT4 822 aa10.11□□□□□ -0.79
CD44-201ENST00000263398 IGLV3-10A0A075B6K4 115 aa10.11□□□□□ -0.79
CD44-201ENST00000263398 A0A0J9YY10 115 aa10.11□□□□□ -0.79
CD44-201ENST00000263398 FAM171A2A8MVW0 826 aa10.11□□□□□ -0.79
CD44-201ENST00000263398 AP1G1O43747 822 aa10.11□□□□□ -0.79
CD44-201ENST00000263398 SLC22A5O76082 557 aa10.11□□□□□ -0.79
CD44-201ENST00000263398 AKR1C4P17516 323 aa10.11□□□□□ -0.79
CD44-201ENST00000263398 IMPA1P29218 277 aa10.11□□□□□ -0.79
CD44-201ENST00000263398 DAPP51397 102 aa10.11□□□□□ -0.79
CD44-201ENST00000263398 TSPAN31Q12999 210 aa10.11□□□□□ -0.79
CD44-201ENST00000263398 MRPL49Q13405 166 aaKnown RBP10.11□□□□□ -0.79
CD44-201ENST00000263398 FAM69AQ5T7M9 428 aa10.11□□□□□ -0.79
CD44-201ENST00000263398 PIP5KL1Q5T9C9 394 aa10.11□□□□□ -0.79
CD44-201ENST00000263398 RAET1LQ5VY80 246 aa10.11□□□□□ -0.79
CD44-201ENST00000263398 ZC3H14Q6PJT7 736 aaKnown RBP10.11□□□□□ -0.79
CD44-201ENST00000263398 ZNF765Q7L2R6 523 aa10.11□□□□□ -0.79
CD44-201ENST00000263398 LRRC28Q86X40 367 aaPredicted RBP10.11□□□□□ -0.79
CD44-201ENST00000263398 ZNF761Q86XN6 746 aaPredicted RBP10.11□□□□□ -0.79
CD44-201ENST00000263398 SDR9C7Q8NEX9 313 aa10.11□□□□□ -0.79
CD44-201ENST00000263398 SCGB1C1Q8TD33 95 aa10.11□□□□□ -0.79
CD44-201ENST00000263398 DIO2Q92813 273 aa10.11□□□□□ -0.79
CD44-201ENST00000263398 HRASLS5Q96KN8 279 aa10.11□□□□□ -0.79
CD44-201ENST00000263398 ATXN7L1Q9ULK2 861 aaPredicted RBP10.11□□□□□ -0.79
CD44-201ENST00000263398 SLC35A3Q9Y2D2 325 aa10.11□□□□□ -0.79
CD44-201ENST00000263398 KIR2DS5A0A0G2JLQ3 304 aa10.1□□□□□ -0.79
CD44-201ENST00000263398 A0A0G2JNG1 304 aa10.1□□□□□ -0.79
CD44-201ENST00000263398 KIR2DS3K7RE56 304 aa10.1□□□□□ -0.79
CD44-201ENST00000263398 SLC16A6O15403 523 aa10.1□□□□□ -0.79
CD44-201ENST00000263398 RDH16O75452 317 aa10.1□□□□□ -0.79
CD44-201ENST00000263398 RAB3DO95716 219 aa10.1□□□□□ -0.79
CD44-201ENST00000263398 TFP02787 698 aa10.1□□□□□ -0.79
CD44-201ENST00000263398 FBXO45P0C2W1 286 aa10.1□□□□□ -0.79
CD44-201ENST00000263398 LSSP48449 732 aa10.1□□□□□ -0.79
CD44-201ENST00000263398 KIR2DS5Q14953 304 aa10.1□□□□□ -0.79
CD44-201ENST00000263398 C3orf33Q6P1S2 294 aa10.1□□□□□ -0.79
CD44-201ENST00000263398 Q6ZPB1 254 aaPredicted RBP10.1□□□□□ -0.79
CD44-201ENST00000263398 MEX3DQ86XN8 651 aaKnown RBP10.1□□□□□ -0.79
CD44-201ENST00000263398 OR7D2Q96RA2 312 aa10.1□□□□□ -0.79
CD44-201ENST00000263398 MACROD1Q9BQ69 325 aa10.1□□□□□ -0.79
CD44-201ENST00000263398 GLS2Q9UI32 602 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms