RNA–Protein interactions for RNA: ENST00000252816.10

LSM4-201, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM4, Length 986 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-201ENST00000252816 UQCRC2P22695 453 aa20.73■□□□□ 0.91
LSM4-201ENST00000252816 TPD52P55327 224 aaPredicted RBP20.73■□□□□ 0.91
LSM4-201ENST00000252816 DLX5P56178 289 aa20.73■□□□□ 0.91
LSM4-201ENST00000252816 KLHL26Q53HC5 615 aa20.73■□□□□ 0.91
LSM4-201ENST00000252816 DDX59Q5T1V6 619 aaKnown RBP eCLIP20.73■□□□□ 0.91
LSM4-201ENST00000252816 DMRTC2Q8IXT2 367 aaPredicted RBP20.73■□□□□ 0.91
LSM4-201ENST00000252816 UBQLNLQ8IYU4 475 aa20.73■□□□□ 0.91
LSM4-201ENST00000252816 MIPOL1Q8TD10 442 aa20.73■□□□□ 0.91
LSM4-201ENST00000252816 NPAS1Q99742 590 aa20.73■□□□□ 0.91
LSM4-201ENST00000252816 PIGQQ9BRB3 760 aa20.73■□□□□ 0.91
LSM4-201ENST00000252816 VIPAS39Q9H9C1 493 aa20.73■□□□□ 0.91
LSM4-201ENST00000252816 SLCO1B3Q9NPD5 702 aa20.73■□□□□ 0.91
LSM4-201ENST00000252816 ARGLU1Q9NWB6 273 aaPredicted RBP20.73■□□□□ 0.91
LSM4-201ENST00000252816 ZNF629Q9UEG4 869 aaPredicted RBP20.73■□□□□ 0.91
LSM4-201ENST00000252816 BTNL2Q9UIR0 455 aa20.73■□□□□ 0.91
LSM4-201ENST00000252816 USH1CQ9Y6N9 552 aa20.73■□□□□ 0.91
LSM4-201ENST00000252816 H3BML4 177 aa20.72■□□□□ 0.91
LSM4-201ENST00000252816 OIP5O43482 229 aa20.72■□□□□ 0.91
LSM4-201ENST00000252816 PGRP06401 933 aa20.72■□□□□ 0.91
LSM4-201ENST00000252816 AGFG1P52594 562 aaKnown RBP20.72■□□□□ 0.91
LSM4-201ENST00000252816 SUCLG1P53597 346 aaKnown RBP20.72■□□□□ 0.91
LSM4-201ENST00000252816 FLYWCH1Q4VC44 716 aa20.72■□□□□ 0.91
LSM4-201ENST00000252816 PDCD4Q53EL6 469 aaKnown RBP20.72■□□□□ 0.91
LSM4-201ENST00000252816 SAXO2Q658L1 398 aa20.72■□□□□ 0.91
LSM4-201ENST00000252816 OLIG3Q7RTU3 272 aa20.72■□□□□ 0.91
LSM4-201ENST00000252816 MISPQ8IVT2 679 aa20.72■□□□□ 0.91
LSM4-201ENST00000252816 CHDHQ8NE62 594 aaPredicted RBP20.72■□□□□ 0.91
LSM4-201ENST00000252816 GOT1L1Q8NHS2 421 aaPredicted RBP20.72■□□□□ 0.91
LSM4-201ENST00000252816 LRRC8CQ8TDW0 803 aa20.72■□□□□ 0.91
LSM4-201ENST00000252816 WNT2BQ93097 391 aa20.72■□□□□ 0.91
LSM4-201ENST00000252816 C7orf26Q96N11 449 aa20.72■□□□□ 0.91
LSM4-201ENST00000252816 INPP5KQ9BT40 448 aa20.72■□□□□ 0.91
LSM4-201ENST00000252816 HOXD1Q9GZZ0 328 aa20.72■□□□□ 0.91
LSM4-201ENST00000252816 OR51I1Q9H343 314 aa20.72■□□□□ 0.91
LSM4-201ENST00000252816 HHATLQ9HCP6 504 aa20.72■□□□□ 0.91
LSM4-201ENST00000252816 CSMD1Q96PZ7 3565 aa20.71■□□□□ 0.91
LSM4-201ENST00000252816 DUXAA6NLW8 204 aa20.71■□□□□ 0.91
LSM4-201ENST00000252816 LINC01387J3KSC0 135 aa20.71■□□□□ 0.91
LSM4-201ENST00000252816 HCRTR2O43614 444 aa20.71■□□□□ 0.91
LSM4-201ENST00000252816 DIAPH2O60879 1101 aa20.71■□□□□ 0.91
LSM4-201ENST00000252816 TGM6O95932 706 aa20.71■□□□□ 0.91
LSM4-201ENST00000252816 IDO1P14902 403 aa20.71■□□□□ 0.91
LSM4-201ENST00000252816 CTSSP25774 331 aa20.71■□□□□ 0.91
LSM4-201ENST00000252816 ATP12AP54707 1039 aa20.71■□□□□ 0.91
LSM4-201ENST00000252816 CLDN20P56880 219 aa20.71■□□□□ 0.91
LSM4-201ENST00000252816 FOXF2Q12947 444 aa20.71■□□□□ 0.91
LSM4-201ENST00000252816 B4GALNT2Q8NHY0 566 aa20.71■□□□□ 0.91
LSM4-201ENST00000252816 PHOSPHO1Q8TCT1 267 aa20.71■□□□□ 0.91
LSM4-201ENST00000252816 NEURL3Q96EH8 262 aa20.71■□□□□ 0.91
LSM4-201ENST00000252816 OR52E6Q96RD3 313 aa20.71■□□□□ 0.91
LSM4-201ENST00000252816 ZBTB18Q99592 522 aa20.71■□□□□ 0.91
LSM4-201ENST00000252816 MED17Q9NVC6 651 aa20.71■□□□□ 0.91
LSM4-201ENST00000252816 A0A087WZY1 265 aa20.7■□□□□ 0.9
LSM4-201ENST00000252816 HMGB1P1B2RPK0 211 aaPredicted RBP20.7■□□□□ 0.9
LSM4-201ENST00000252816 SEC14L5O43304 696 aa20.7■□□□□ 0.9
LSM4-201ENST00000252816 FCMRO60667 390 aa20.7■□□□□ 0.9
LSM4-201ENST00000252816 SASH3O75995 380 aa20.7■□□□□ 0.9
LSM4-201ENST00000252816 RCBTB2O95199 551 aa20.7■□□□□ 0.9
LSM4-201ENST00000252816 TMIGD3P0DMS9 266 aaPredicted RBP20.7■□□□□ 0.9
LSM4-201ENST00000252816 OR12D1P0DN82 309 aa20.7■□□□□ 0.9
LSM4-201ENST00000252816 CDKN2CP42773 168 aa20.7■□□□□ 0.9
LSM4-201ENST00000252816 ZNF117Q03924 483 aa20.7■□□□□ 0.9
LSM4-201ENST00000252816 PLPPR5Q32ZL2 321 aa20.7■□□□□ 0.9
LSM4-201ENST00000252816 ARHGAP11BQ3KRB8 267 aa20.7■□□□□ 0.9
LSM4-201ENST00000252816 HEPHL1Q6MZM0 1159 aa20.7■□□□□ 0.9
LSM4-201ENST00000252816 TNFAIP8L2Q6P589 184 aaPredicted RBP20.7■□□□□ 0.9
LSM4-201ENST00000252816 CBLN3Q6UW01 205 aa20.7■□□□□ 0.9
LSM4-201ENST00000252816 EPGNQ6UW88 154 aa20.7■□□□□ 0.9
LSM4-201ENST00000252816 GRAMD2AQ8IUY3 354 aa20.7■□□□□ 0.9
LSM4-201ENST00000252816 MEIOBQ8N635 442 aa20.7■□□□□ 0.9
LSM4-201ENST00000252816 ZNF527Q8NB42 609 aa20.7■□□□□ 0.9
LSM4-201ENST00000252816 SMPDL3BQ92485 455 aa20.7■□□□□ 0.9
LSM4-201ENST00000252816 RAB8BQ92930 207 aa20.7■□□□□ 0.9
LSM4-201ENST00000252816 TM9SF2Q99805 663 aa20.7■□□□□ 0.9
LSM4-201ENST00000252816 SLC35A5Q9BS91 424 aa20.7■□□□□ 0.9
LSM4-201ENST00000252816 CCDC154A6NI56 674 aa20.69■□□□□ 0.9
LSM4-201ENST00000252816 SLC22A3O75751 556 aa20.69■□□□□ 0.9
LSM4-201ENST00000252816 IL18BPO95998 194 aa20.69■□□□□ 0.9
LSM4-201ENST00000252816 AK1P00568 194 aa20.69■□□□□ 0.9
LSM4-201ENST00000252816 ZNF17P17021 662 aa20.69■□□□□ 0.9
LSM4-201ENST00000252816 PSMA4P25789 261 aaKnown RBP20.69■□□□□ 0.9
LSM4-201ENST00000252816 ASCL1P50553 236 aa20.69■□□□□ 0.9
LSM4-201ENST00000252816 GSTA3Q16772 222 aa20.69■□□□□ 0.9
LSM4-201ENST00000252816 NDUFAF6Q330K2 333 aa20.69■□□□□ 0.9
LSM4-201ENST00000252816 MTERF4Q7Z6M4 381 aaKnown RBP20.69■□□□□ 0.9
LSM4-201ENST00000252816 GTPBP8Q8N3Z3 284 aaPredicted RBP20.69■□□□□ 0.9
LSM4-201ENST00000252816 GOLGA6L1Q8N7Z2 621 aa20.69■□□□□ 0.9
LSM4-201ENST00000252816 GLB1L3Q8NCI6 653 aaPredicted RBP20.69■□□□□ 0.9
LSM4-201ENST00000252816 XAGE5Q8WWM1 108 aa20.69■□□□□ 0.9
LSM4-201ENST00000252816 INTS12Q96CB8 462 aaKnown RBP20.69■□□□□ 0.9
LSM4-201ENST00000252816 C14orf79Q96F83 325 aa20.69■□□□□ 0.9
LSM4-201ENST00000252816 PANX1Q96RD7 426 aa20.69■□□□□ 0.9
LSM4-201ENST00000252816 NMUR2Q9GZQ4 415 aa20.69■□□□□ 0.9
LSM4-201ENST00000252816 ZNF350Q9GZX5 532 aa20.69■□□□□ 0.9
LSM4-201ENST00000252816 SDR39U1Q9NRG7 319 aaPredicted RBP20.69■□□□□ 0.9
LSM4-201ENST00000252816 KCNE5Q9UJ90 142 aa20.69■□□□□ 0.9
LSM4-201ENST00000252816 CARD8Q9Y2G2 431 aa20.69■□□□□ 0.9
LSM4-201ENST00000252816 DTNAQ9Y4J8 743 aa20.69■□□□□ 0.9
LSM4-201ENST00000252816 AP4B1Q9Y6B7 739 aa20.69■□□□□ 0.9
LSM4-201ENST00000252816 CENPVL1A0A0U1RR11 272 aa20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms