RNA–Protein interactions for RNA: ENST00000233468.4

SF3B6-201, Transcript of splicing factor 3b subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B6, Length 770 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-201ENST00000233468 CGB2Q6NT52 195 aa10.27□□□□□ -0.77
SF3B6-201ENST00000233468 SLC2A7Q6PXP3 512 aa10.27□□□□□ -0.77
SF3B6-201ENST00000233468 Q6ZPB1 254 aaPredicted RBP10.27□□□□□ -0.77
SF3B6-201ENST00000233468 MARCH3Q86UD3 253 aa10.27□□□□□ -0.77
SF3B6-201ENST00000233468 PM20D2Q8IYS1 436 aa10.27□□□□□ -0.77
SF3B6-201ENST00000233468 WDSUB1Q8N9V3 476 aa10.27□□□□□ -0.77
SF3B6-201ENST00000233468 PCYOX1LQ8NBM8 494 aa10.27□□□□□ -0.77
SF3B6-201ENST00000233468 OR4C3Q8NH37 302 aa10.27□□□□□ -0.77
SF3B6-201ENST00000233468 OR14L1PQ8NHC6 308 aa10.27□□□□□ -0.77
SF3B6-201ENST00000233468 NEIL3Q8TAT5 605 aa10.27□□□□□ -0.77
SF3B6-201ENST00000233468 FAM57AQ8TBR7 257 aa10.27□□□□□ -0.77
SF3B6-201ENST00000233468 ROPN1LQ96C74 230 aa10.27□□□□□ -0.77
SF3B6-201ENST00000233468 SH3GL1Q99961 368 aa10.27□□□□□ -0.77
SF3B6-201ENST00000233468 ZNF350Q9GZX5 532 aa10.27□□□□□ -0.77
SF3B6-201ENST00000233468 TP63Q9H3D4 680 aaPredicted RBP10.27□□□□□ -0.77
SF3B6-201ENST00000233468 ZNF385DQ9H6B1 395 aa10.27□□□□□ -0.77
SF3B6-201ENST00000233468 TAS2R10Q9NYW0 307 aa10.27□□□□□ -0.77
SF3B6-201ENST00000233468 NIPSNAP3AQ9UFN0 247 aaPredicted RBP10.27□□□□□ -0.77
SF3B6-201ENST00000233468 ZNF835Q9Y2P0 537 aa10.27□□□□□ -0.77
SF3B6-201ENST00000233468 WDR45Q9Y484 360 aa10.27□□□□□ -0.77
SF3B6-201ENST00000233468 DTNAQ9Y4J8 743 aa10.27□□□□□ -0.77
SF3B6-201ENST00000233468 PCDHB14Q9Y5E9 798 aa10.27□□□□□ -0.77
SF3B6-201ENST00000233468 CAPN7Q9Y6W3 813 aa10.27□□□□□ -0.77
SF3B6-201ENST00000233468 ADGRG4Q8IZF6 3080 aa10.26□□□□□ -0.77
SF3B6-201ENST00000233468 IGLV3-32A0A0A0MS00 114 aa10.26□□□□□ -0.77
SF3B6-201ENST00000233468 C15orf38-AP3S2A0A0A6YYH1 394 aa10.26□□□□□ -0.77
SF3B6-201ENST00000233468 C5orf58C9J3I9 102 aa10.26□□□□□ -0.77
SF3B6-201ENST00000233468 HMGN4O00479 90 aa10.26□□□□□ -0.77
SF3B6-201ENST00000233468 ZG16O60844 167 aa10.26□□□□□ -0.77
SF3B6-201ENST00000233468 ACTL6AO96019 429 aa10.26□□□□□ -0.77
SF3B6-201ENST00000233468 NPPAP01160 153 aa10.26□□□□□ -0.77
SF3B6-201ENST00000233468 TPOP07202 933 aa10.26□□□□□ -0.77
SF3B6-201ENST00000233468 GABRA1P14867 456 aa10.26□□□□□ -0.77
SF3B6-201ENST00000233468 CAPN3P20807 821 aa10.26□□□□□ -0.77
SF3B6-201ENST00000233468 DPP4P27487 766 aa10.26□□□□□ -0.77
SF3B6-201ENST00000233468 CA7P43166 264 aa10.26□□□□□ -0.77
SF3B6-201ENST00000233468 CRISP3P54108 245 aa10.26□□□□□ -0.77
SF3B6-201ENST00000233468 DSTNP60981 165 aa10.26□□□□□ -0.77
SF3B6-201ENST00000233468 CYLC2Q14093 348 aaPredicted RBP10.26□□□□□ -0.77
SF3B6-201ENST00000233468 GPR68Q15743 365 aa10.26□□□□□ -0.77
SF3B6-201ENST00000233468 ZSWIM7Q19AV6 140 aa10.26□□□□□ -0.77
SF3B6-201ENST00000233468 AP1ARQ63HQ0 302 aa10.26□□□□□ -0.77
SF3B6-201ENST00000233468 TMEM211Q6ICI0 200 aa10.26□□□□□ -0.77
SF3B6-201ENST00000233468 ENPP6Q6UWR7 440 aa10.26□□□□□ -0.77
SF3B6-201ENST00000233468 LRRC74BQ6ZQY2 392 aa10.26□□□□□ -0.77
SF3B6-201ENST00000233468 EIF3MQ7L2H7 374 aaKnown RBP10.26□□□□□ -0.77
SF3B6-201ENST00000233468 GALNT10Q86SR1 603 aa10.26□□□□□ -0.77
SF3B6-201ENST00000233468 IFNEQ86WN2 208 aa10.26□□□□□ -0.77
SF3B6-201ENST00000233468 ZNF619Q8N2I2 560 aa10.26□□□□□ -0.77
SF3B6-201ENST00000233468 DPP10Q8N608 796 aa10.26□□□□□ -0.77
SF3B6-201ENST00000233468 METTL25Q8N6Q8 603 aa10.26□□□□□ -0.77
SF3B6-201ENST00000233468 ZNF614Q8N883 585 aa10.26□□□□□ -0.77
SF3B6-201ENST00000233468 FADS6Q8N9I5 356 aa10.26□□□□□ -0.77
SF3B6-201ENST00000233468 FAM83FQ8NEG4 500 aaPredicted RBP10.26□□□□□ -0.77
SF3B6-201ENST00000233468 PNPT1Q8TCS8 783 aaKnown RBP10.26□□□□□ -0.77
SF3B6-201ENST00000233468 PHOSPHO1Q8TCT1 267 aa10.26□□□□□ -0.77
SF3B6-201ENST00000233468 C10orf82Q8WW14 230 aa10.26□□□□□ -0.77
SF3B6-201ENST00000233468 RAB8BQ92930 207 aa10.26□□□□□ -0.77
SF3B6-201ENST00000233468 RELTQ969Z4 430 aa10.26□□□□□ -0.77
SF3B6-201ENST00000233468 ELAC2Q9BQ52 826 aaKnown RBP10.26□□□□□ -0.77
SF3B6-201ENST00000233468 OR2B2Q9GZK3 357 aa10.26□□□□□ -0.77
SF3B6-201ENST00000233468 PAIP1Q9H074 479 aaKnown RBP10.26□□□□□ -0.77
SF3B6-201ENST00000233468 FAM107BQ9H098 131 aa10.26□□□□□ -0.77
SF3B6-201ENST00000233468 DSN1Q9H410 356 aa10.26□□□□□ -0.77
SF3B6-201ENST00000233468 SERHL2Q9H4I8 314 aa10.26□□□□□ -0.77
SF3B6-201ENST00000233468 ARMC7Q9H6L4 198 aa10.26□□□□□ -0.77
SF3B6-201ENST00000233468 MTHFD2LQ9H903 347 aaPredicted RBP10.26□□□□□ -0.77
SF3B6-201ENST00000233468 SAR1AQ9NR31 198 aa10.26□□□□□ -0.77
SF3B6-201ENST00000233468 GMEB1Q9Y692 573 aa10.26□□□□□ -0.77
SF3B6-201ENST00000233468 KCNE3Q9Y6H6 103 aa10.26□□□□□ -0.77
SF3B6-201ENST00000233468 NPIPA2E9PIF3 369 aa10.25□□□□□ -0.77
SF3B6-201ENST00000233468 NPIPA3F8WFD2 350 aa10.25□□□□□ -0.77
SF3B6-201ENST00000233468 HCRTR2O43614 444 aa10.25□□□□□ -0.77
SF3B6-201ENST00000233468 KIAA0513O60268 411 aa10.25□□□□□ -0.77
SF3B6-201ENST00000233468 EIF4E2O60573 245 aaKnown RBP10.25□□□□□ -0.77
SF3B6-201ENST00000233468 WDR1O75083 606 aa10.25□□□□□ -0.77
SF3B6-201ENST00000233468 CELA3AP09093 270 aa10.25□□□□□ -0.77
SF3B6-201ENST00000233468 HK1P19367 917 aa10.25□□□□□ -0.77
SF3B6-201ENST00000233468 ADH7P40394 386 aa10.25□□□□□ -0.77
SF3B6-201ENST00000233468 ZNF41P51814 821 aaPredicted RBP10.25□□□□□ -0.77
SF3B6-201ENST00000233468 SEC24CP53992 1094 aa10.25□□□□□ -0.77
SF3B6-201ENST00000233468 CASP9P55211 416 aa10.25□□□□□ -0.77
SF3B6-201ENST00000233468 SUMO3P55854 103 aaPredicted RBP10.25□□□□□ -0.77
SF3B6-201ENST00000233468 HSF1Q00613 529 aa10.25□□□□□ -0.77
SF3B6-201ENST00000233468 SF3A3Q12874 501 aaKnown RBP eCLIP10.25□□□□□ -0.77
SF3B6-201ENST00000233468 KLF10Q13118 480 aa10.25□□□□□ -0.77
SF3B6-201ENST00000233468 NFYCQ13952 458 aa10.25□□□□□ -0.77
SF3B6-201ENST00000233468 RGNQ15493 299 aa10.25□□□□□ -0.77
SF3B6-201ENST00000233468 ZNF141Q15928 474 aa10.25□□□□□ -0.77
SF3B6-201ENST00000233468 GXYLT1Q4G148 440 aa10.25□□□□□ -0.77
SF3B6-201ENST00000233468 KLHL26Q53HC5 615 aa10.25□□□□□ -0.77
SF3B6-201ENST00000233468 NHSL2Q5HYW2 709 aa10.25□□□□□ -0.77
SF3B6-201ENST00000233468 PAGE3Q5JUK9 113 aa10.25□□□□□ -0.77
SF3B6-201ENST00000233468 DDX59Q5T1V6 619 aaKnown RBP eCLIP10.25□□□□□ -0.77
SF3B6-201ENST00000233468 PRAMEF8Q5VWM4 474 aa10.25□□□□□ -0.77
SF3B6-201ENST00000233468 PRAMEF7Q5VXH5 474 aa10.25□□□□□ -0.77
SF3B6-201ENST00000233468 OR5M10Q6IEU7 315 aa10.25□□□□□ -0.77
SF3B6-201ENST00000233468 DHDDSQ86SQ9 333 aa10.25□□□□□ -0.77
SF3B6-201ENST00000233468 YRDCQ86U90 279 aaKnown RBP10.25□□□□□ -0.77
SF3B6-201ENST00000233468 CMIPQ8IY22 773 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms