RNA–Protein interactions for RNA: ENST00000225964.9

COL1A1-201, Transcript of collagen type I alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A1, Length 6,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-201ENST00000225964 IFNA10P01566 189 aa12.47□□□□□ -0.41
COL1A1-201ENST00000225964 CNR2P34972 360 aa12.47□□□□□ -0.41
COL1A1-201ENST00000225964 C6orf183Q5T699 404 aa12.47□□□□□ -0.41
COL1A1-201ENST00000225964 SGPP2Q8IWX5 399 aa12.47□□□□□ -0.41
COL1A1-201ENST00000225964 OR9Q2Q8NGE9 314 aa12.47□□□□□ -0.41
COL1A1-201ENST00000225964 COG8Q96MW5 612 aa12.47□□□□□ -0.41
COL1A1-201ENST00000225964 SNX18Q96RF0 628 aa12.47□□□□□ -0.41
COL1A1-201ENST00000225964 NGBQ9NPG2 151 aa12.47□□□□□ -0.41
COL1A1-201ENST00000225964 SLC35A3Q9Y2D2 325 aa12.47□□□□□ -0.41
COL1A1-201ENST00000225964 ARFGEF2Q9Y6D5 1785 aa12.47□□□□□ -0.41
COL1A1-201ENST00000225964 PTGESO14684 152 aa12.47□□□□□ -0.41
COL1A1-201ENST00000225964 TIMM8AO60220 97 aaPredicted RBP12.47□□□□□ -0.41
COL1A1-201ENST00000225964 DMWDQ09019 674 aa12.47□□□□□ -0.41
COL1A1-201ENST00000225964 GPR50Q13585 617 aa12.47□□□□□ -0.41
COL1A1-201ENST00000225964 TRMT2BQ96GJ1 504 aaKnown RBP12.47□□□□□ -0.41
COL1A1-201ENST00000225964 DPCDQ9BVM2 203 aaPredicted RBP12.47□□□□□ -0.41
COL1A1-201ENST00000225964 GPN2Q9H9Y4 310 aaPredicted RBP12.47□□□□□ -0.41
COL1A1-201ENST00000225964 TAAR2Q9P1P5 351 aa12.47□□□□□ -0.41
COL1A1-201ENST00000225964 PVRP15151 417 aa12.47□□□□□ -0.41
COL1A1-201ENST00000225964 DNASE1P24855 282 aa12.47□□□□□ -0.41
COL1A1-201ENST00000225964 ALDH3B2P48448 385 aa12.47□□□□□ -0.41
COL1A1-201ENST00000225964 SH3BP2P78314 561 aa12.47□□□□□ -0.41
COL1A1-201ENST00000225964 TP53INP2Q8IXH6 220 aa12.47□□□□□ -0.41
COL1A1-201ENST00000225964 RAB39BQ96DA2 213 aa12.47□□□□□ -0.41
COL1A1-201ENST00000225964 PREBQ9HCU5 417 aa12.47□□□□□ -0.41
COL1A1-201ENST00000225964 CUTCQ9NTM9 273 aa12.47□□□□□ -0.41
COL1A1-201ENST00000225964 TMEM9Q9P0T7 183 aa12.47□□□□□ -0.41
COL1A1-201ENST00000225964 CASC3O15234 703 aaKnown RBP12.47□□□□□ -0.41
COL1A1-201ENST00000225964 SERPINE2P07093 398 aa12.47□□□□□ -0.41
COL1A1-201ENST00000225964 SERPINA2P20848 420 aa12.47□□□□□ -0.41
COL1A1-201ENST00000225964 HOXA11P31270 313 aaPredicted RBP12.47□□□□□ -0.41
COL1A1-201ENST00000225964 AQP2P41181 271 aa12.47□□□□□ -0.41
COL1A1-201ENST00000225964 MICAQ29983 383 aa12.47□□□□□ -0.41
COL1A1-201ENST00000225964 KANSL1Q7Z3B3 1105 aa12.47□□□□□ -0.41
COL1A1-201ENST00000225964 L3HYPDHQ96EM0 354 aa12.47□□□□□ -0.41
COL1A1-201ENST00000225964 SLC25A18Q9H1K4 315 aa12.47□□□□□ -0.41
COL1A1-201ENST00000225964 FKRPQ9H9S5 495 aa12.47□□□□□ -0.41
COL1A1-201ENST00000225964 DECR2Q9NUI1 292 aa12.47□□□□□ -0.41
COL1A1-201ENST00000225964 TAS2R8Q9NYW2 309 aa12.47□□□□□ -0.41
COL1A1-201ENST00000225964 MYH8P13535 1937 aa12.47□□□□□ -0.41
COL1A1-201ENST00000225964 ZFAND5O76080 213 aa12.47□□□□□ -0.41
COL1A1-201ENST00000225964 SERPINA7P05543 415 aa12.47□□□□□ -0.41
COL1A1-201ENST00000225964 OSMP13725 252 aa12.47□□□□□ -0.41
COL1A1-201ENST00000225964 AGTR1P30556 359 aa12.47□□□□□ -0.41
COL1A1-201ENST00000225964 ERVK-25P63136 954 aa12.47□□□□□ -0.41
COL1A1-201ENST00000225964 RAB6CQ53S08 254 aa12.47□□□□□ -0.41
COL1A1-201ENST00000225964 C17orf99Q6UX52 265 aa12.47□□□□□ -0.41
COL1A1-201ENST00000225964 MRPL10Q7Z7H8 261 aaKnown RBP12.47□□□□□ -0.41
COL1A1-201ENST00000225964 ARRDC3Q96B67 414 aa12.47□□□□□ -0.41
COL1A1-201ENST00000225964 FEVQ99581 238 aa12.47□□□□□ -0.41
COL1A1-201ENST00000225964 RAB6CQ9H0N0 254 aa12.47□□□□□ -0.41
COL1A1-201ENST00000225964 INIPQ9NRY2 104 aa12.47□□□□□ -0.41
COL1A1-201ENST00000225964 SPO11Q9Y5K1 396 aa12.47□□□□□ -0.41
COL1A1-201ENST00000225964 D6RAR5 112 aa12.46□□□□□ -0.41
COL1A1-201ENST00000225964 H7C2Y5 167 aa12.46□□□□□ -0.41
COL1A1-201ENST00000225964 M0QZQ0 153 aa12.46□□□□□ -0.41
COL1A1-201ENST00000225964 IL7P13232 177 aa12.46□□□□□ -0.41
COL1A1-201ENST00000225964 ZNF44P15621 663 aa12.46□□□□□ -0.41
COL1A1-201ENST00000225964 CRHBPP24387 322 aa12.46□□□□□ -0.41
COL1A1-201ENST00000225964 HOXA9P31269 272 aa12.46□□□□□ -0.41
COL1A1-201ENST00000225964 TAS2R20P59543 309 aa12.46□□□□□ -0.41
COL1A1-201ENST00000225964 SEC61A1P61619 476 aaKnown RBP12.46□□□□□ -0.41
COL1A1-201ENST00000225964 GLO1Q04760 184 aa12.46□□□□□ -0.41
COL1A1-201ENST00000225964 IL17RDQ8NFM7 739 aa12.46□□□□□ -0.41
COL1A1-201ENST00000225964 OR4K5Q8NGD3 323 aa12.46□□□□□ -0.41
COL1A1-201ENST00000225964 OR6C1Q96RD1 312 aa12.46□□□□□ -0.41
COL1A1-201ENST00000225964 RPH3ALQ9UNE2 315 aa12.46□□□□□ -0.41
COL1A1-201ENST00000225964 AP1G1O43747 822 aa12.46□□□□□ -0.41
COL1A1-201ENST00000225964 PSMB10P40306 273 aa12.46□□□□□ -0.41
COL1A1-201ENST00000225964 CCL11P51671 97 aa12.46□□□□□ -0.41
COL1A1-201ENST00000225964 MSANTD3Q96H12 275 aa12.46□□□□□ -0.41
COL1A1-201ENST00000225964 ZNF317Q96PQ6 595 aaPredicted RBP12.46□□□□□ -0.41
COL1A1-201ENST00000225964 ADOQ96SZ5 270 aa12.46□□□□□ -0.41
COL1A1-201ENST00000225964 IGSF5Q9NSI5 407 aa12.46□□□□□ -0.41
COL1A1-201ENST00000225964 RIMS3Q9UJD0 308 aa12.46□□□□□ -0.41
COL1A1-201ENST00000225964 FAM208AQ9UK61 1670 aaKnown RBP12.46□□□□□ -0.41
COL1A1-201ENST00000225964 NOTOA8MTQ0 251 aa12.46□□□□□ -0.41
COL1A1-201ENST00000225964 SCRG1O75711 98 aa12.46□□□□□ -0.41
COL1A1-201ENST00000225964 TSFMP43897 325 aaKnown RBP12.46□□□□□ -0.41
COL1A1-201ENST00000225964 PARS2Q7L3T8 475 aaKnown RBP12.46□□□□□ -0.41
COL1A1-201ENST00000225964 LRRTM3Q86VH5 581 aa12.46□□□□□ -0.41
COL1A1-201ENST00000225964 TCEAL8Q8IYN2 117 aa12.46□□□□□ -0.41
COL1A1-201ENST00000225964 OR1J4Q8NGS1 313 aa12.46□□□□□ -0.41
COL1A1-201ENST00000225964 PHOSPHO2Q8TCD6 241 aa12.46□□□□□ -0.41
COL1A1-201ENST00000225964 STK35Q8TDR2 534 aa12.46□□□□□ -0.41
COL1A1-201ENST00000225964 TMEM239Q8WW34 195 aa12.46□□□□□ -0.41
COL1A1-201ENST00000225964 CBLCQ9ULV8 474 aa12.46□□□□□ -0.41
COL1A1-201ENST00000225964 PHRF1Q9P1Y6 1649 aaKnown RBP12.46□□□□□ -0.41
COL1A1-201ENST00000225964 RGPD8O14715 1765 aaPredicted RBP12.46□□□□□ -0.42
COL1A1-201ENST00000225964 NUDT1P36639 197 aa12.46□□□□□ -0.42
COL1A1-201ENST00000225964 FAM189BP81408 668 aa12.46□□□□□ -0.42
COL1A1-201ENST00000225964 P2RY14Q15391 338 aa12.46□□□□□ -0.42
COL1A1-201ENST00000225964 NKAIN2Q5VXU1 208 aa12.46□□□□□ -0.42
COL1A1-201ENST00000225964 DTD2Q96FN9 168 aa12.46□□□□□ -0.42
COL1A1-201ENST00000225964 ZNF778Q96MU6 729 aa12.46□□□□□ -0.42
COL1A1-201ENST00000225964 KLF16Q9BXK1 252 aaPredicted RBP12.46□□□□□ -0.42
COL1A1-201ENST00000225964 FAIMQ9NVQ4 179 aa12.46□□□□□ -0.42
COL1A1-201ENST00000225964 CSNK1G3Q9Y6M4 447 aa12.46□□□□□ -0.42
COL1A1-201ENST00000225964 TRAPPC2LH3BP13 241 aa12.46□□□□□ -0.42
COL1A1-201ENST00000225964 FOXE1O00358 373 aaPredicted RBP12.46□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms