RNA–Protein interactions for RNA: ENST00000641573.1

PHGDH-221, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-221ENST00000641573 AP1ARQ63HQ0 302 aa12.11□□□□□ -0.47
PHGDH-221ENST00000641573 ANKRD34AQ69YU3 496 aa12.11□□□□□ -0.47
PHGDH-221ENST00000641573 FAM199XQ6PEV8 388 aaPredicted RBP12.11□□□□□ -0.47
PHGDH-221ENST00000641573 FAM198BQ6UWH4 519 aa12.11□□□□□ -0.47
PHGDH-221ENST00000641573 ZNF836Q6ZNA1 936 aa12.11□□□□□ -0.47
PHGDH-221ENST00000641573 CLIP4Q8N3C7 705 aa12.11□□□□□ -0.47
PHGDH-221ENST00000641573 BCORP1Q8N888 145 aa12.11□□□□□ -0.47
PHGDH-221ENST00000641573 OR4C15Q8NGM1 316 aa12.11□□□□□ -0.47
PHGDH-221ENST00000641573 OR1N1Q8NGS0 311 aa12.11□□□□□ -0.47
PHGDH-221ENST00000641573 RBM4BQ9BQ04 359 aaKnown RBP12.11□□□□□ -0.47
PHGDH-221ENST00000641573 ZPBPQ9BS86 351 aa12.11□□□□□ -0.47
PHGDH-221ENST00000641573 G6PC3Q9BUM1 346 aa12.11□□□□□ -0.47
PHGDH-221ENST00000641573 RBM4Q9BWF3 364 aaKnown RBP12.11□□□□□ -0.47
PHGDH-221ENST00000641573 POLR1BQ9H9Y6 1135 aa12.11□□□□□ -0.47
PHGDH-221ENST00000641573 KLHL28Q9NXS3 571 aa12.11□□□□□ -0.47
PHGDH-221ENST00000641573 SMPD3Q9NY59 655 aaPredicted RBP12.11□□□□□ -0.47
PHGDH-221ENST00000641573 PDP1Q9P0J1 537 aaPredicted RBP12.11□□□□□ -0.47
PHGDH-221ENST00000641573 COPS7AQ9UBW8 275 aa12.11□□□□□ -0.47
PHGDH-221ENST00000641573 NXT1Q9UKK6 140 aaKnown RBP12.11□□□□□ -0.47
PHGDH-221ENST00000641573 CBLCQ9ULV8 474 aa12.11□□□□□ -0.47
PHGDH-221ENST00000641573 OR10H1Q9Y4A9 318 aa12.11□□□□□ -0.47
PHGDH-221ENST00000641573 CHST2Q9Y4C5 530 aa12.11□□□□□ -0.47
PHGDH-221ENST00000641573 LYVE1Q9Y5Y7 322 aa12.11□□□□□ -0.47
PHGDH-221ENST00000641573 SAGE2PA6NJ88 616 aa12.1□□□□□ -0.47
PHGDH-221ENST00000641573 OR6C76A6NM76 312 aa12.1□□□□□ -0.47
PHGDH-221ENST00000641573 PEX12O00623 359 aa12.1□□□□□ -0.47
PHGDH-221ENST00000641573 FFAR1O14842 300 aa12.1□□□□□ -0.47
PHGDH-221ENST00000641573 UGT2B17O75795 530 aa12.1□□□□□ -0.47
PHGDH-221ENST00000641573 STK17BO94768 372 aa12.1□□□□□ -0.47
PHGDH-221ENST00000641573 RPSAP08865 295 aaKnown RBP12.1□□□□□ -0.47
PHGDH-221ENST00000641573 IL7RP16871 459 aa12.1□□□□□ -0.47
PHGDH-221ENST00000641573 DRD5P21918 477 aa12.1□□□□□ -0.47
PHGDH-221ENST00000641573 DCAF7P61962 342 aa12.1□□□□□ -0.47
PHGDH-221ENST00000641573 EEF1A1P68104 462 aaKnown RBP12.1□□□□□ -0.47
PHGDH-221ENST00000641573 PPP2R2BQ00005 443 aa12.1□□□□□ -0.47
PHGDH-221ENST00000641573 EIF3IQ13347 325 aaKnown RBP12.1□□□□□ -0.47
PHGDH-221ENST00000641573 GANABQ14697 944 aaKnown RBP12.1□□□□□ -0.47
PHGDH-221ENST00000641573 NPTX1Q15818 432 aa12.1□□□□□ -0.47
PHGDH-221ENST00000641573 EXOC3L2Q2M3D2 409 aa12.1□□□□□ -0.47
PHGDH-221ENST00000641573 EIPR1Q53HC9 387 aa12.1□□□□□ -0.47
PHGDH-221ENST00000641573 NHSL2Q5HYW2 709 aa12.1□□□□□ -0.47
PHGDH-221ENST00000641573 HLA-DQA1Q5Y7H0 255 aa12.1□□□□□ -0.47
PHGDH-221ENST00000641573 TCTN3Q6NUS6 607 aa12.1□□□□□ -0.47
PHGDH-221ENST00000641573 TMEM205Q6UW68 189 aa12.1□□□□□ -0.47
PHGDH-221ENST00000641573 CCDC81Q6ZN84 652 aa12.1□□□□□ -0.47
PHGDH-221ENST00000641573 ZSCAN1Q8NBB4 408 aa12.1□□□□□ -0.47
PHGDH-221ENST00000641573 OR6T1Q8NGN1 323 aa12.1□□□□□ -0.47
PHGDH-221ENST00000641573 OR52J3Q8NH60 311 aa12.1□□□□□ -0.47
PHGDH-221ENST00000641573 LCORQ96JN0 433 aaPredicted RBP12.1□□□□□ -0.47
PHGDH-221ENST00000641573 GAL3ST4Q96RP7 486 aa12.1□□□□□ -0.47
PHGDH-221ENST00000641573 DDA1Q9BW61 102 aa12.1□□□□□ -0.47
PHGDH-221ENST00000641573 ACER3Q9NUN7 267 aa12.1□□□□□ -0.47
PHGDH-221ENST00000641573 RHCGQ9UBD6 479 aa12.1□□□□□ -0.47
PHGDH-221ENST00000641573 C19orf25Q9UFG5 118 aaPredicted RBP12.1□□□□□ -0.47
PHGDH-221ENST00000641573 KCNE5Q9UJ90 142 aa12.1□□□□□ -0.47
PHGDH-221ENST00000641573 KCND3Q9UK17 655 aa12.1□□□□□ -0.47
PHGDH-221ENST00000641573 C2orf92A0A1B0GVN3 265 aa12.09□□□□□ -0.47
PHGDH-221ENST00000641573 FRG2CA6NGY1 282 aa12.09□□□□□ -0.47
PHGDH-221ENST00000641573 CLDN24A6NM45 220 aa12.09□□□□□ -0.47
PHGDH-221ENST00000641573 K7ENP7 123 aa12.09□□□□□ -0.47
PHGDH-221ENST00000641573 PLD2O14939 933 aa12.09□□□□□ -0.47
PHGDH-221ENST00000641573 FRS3O43559 492 aa12.09□□□□□ -0.47
PHGDH-221ENST00000641573 HS6ST1O60243 411 aa12.09□□□□□ -0.47
PHGDH-221ENST00000641573 PRKNO60260 465 aaPredicted RBP12.09□□□□□ -0.47
PHGDH-221ENST00000641573 SEMA7AO75326 666 aa12.09□□□□□ -0.47
PHGDH-221ENST00000641573 GADD45GO95257 159 aa12.09□□□□□ -0.47
PHGDH-221ENST00000641573 THRBP10828 461 aa12.09□□□□□ -0.47
PHGDH-221ENST00000641573 NID1P14543 1247 aa12.09□□□□□ -0.47
PHGDH-221ENST00000641573 RBMS1P29558 406 aaKnown RBP12.09□□□□□ -0.47
PHGDH-221ENST00000641573 GPR143P51810 404 aa12.09□□□□□ -0.47
PHGDH-221ENST00000641573 HMGA2P52926 109 aa12.09□□□□□ -0.47
PHGDH-221ENST00000641573 PSMD4P55036 377 aaKnown RBP12.09□□□□□ -0.47
PHGDH-221ENST00000641573 RGS8P57771 180 aaPredicted RBP12.09□□□□□ -0.47
PHGDH-221ENST00000641573 MED21Q13503 144 aa12.09□□□□□ -0.47
PHGDH-221ENST00000641573 GK3PQ14409 553 aa12.09□□□□□ -0.47
PHGDH-221ENST00000641573 NCF4Q15080 339 aa12.09□□□□□ -0.47
PHGDH-221ENST00000641573 EBPQ15125 230 aaKnown RBP12.09□□□□□ -0.47
PHGDH-221ENST00000641573 DECR1Q16698 335 aa12.09□□□□□ -0.47
PHGDH-221ENST00000641573 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.09□□□□□ -0.47
PHGDH-221ENST00000641573 ZIK1Q3SY52 487 aaPredicted RBP12.09□□□□□ -0.47
PHGDH-221ENST00000641573 INO80CQ6PI98 192 aaPredicted RBP12.09□□□□□ -0.47
PHGDH-221ENST00000641573 PAPD4Q6PIY7 484 aaKnown RBP12.09□□□□□ -0.47
PHGDH-221ENST00000641573 C6orf15Q6UXA7 325 aaPredicted RBP12.09□□□□□ -0.47
PHGDH-221ENST00000641573 ZNF517Q6ZMY9 492 aaPredicted RBP12.09□□□□□ -0.47
PHGDH-221ENST00000641573 SLC29A4Q7RTT9 530 aa12.09□□□□□ -0.47
PHGDH-221ENST00000641573 CPEB2Q7Z5Q1 589 aaKnown RBP12.09□□□□□ -0.47
PHGDH-221ENST00000641573 C9orf40Q8IXQ3 194 aa12.09□□□□□ -0.47
PHGDH-221ENST00000641573 NFAM1Q8NET5 270 aaPredicted RBP12.09□□□□□ -0.47
PHGDH-221ENST00000641573 B3GNT7Q8NFL0 401 aa12.09□□□□□ -0.47
PHGDH-221ENST00000641573 GIPC3Q8TF64 312 aa12.09□□□□□ -0.47
PHGDH-221ENST00000641573 ADIPOR1Q96A54 375 aa12.09□□□□□ -0.47
PHGDH-221ENST00000641573 WDR77Q9BQA1 342 aaPredicted RBP12.09□□□□□ -0.47
PHGDH-221ENST00000641573 MESP1Q9BRJ9 268 aa12.09□□□□□ -0.47
PHGDH-221ENST00000641573 ADI1Q9BV57 179 aa12.09□□□□□ -0.47
PHGDH-221ENST00000641573 WWTR1Q9GZV5 400 aa12.09□□□□□ -0.47
PHGDH-221ENST00000641573 NXF5Q9H1B4 397 aaKnown RBP12.09□□□□□ -0.47
PHGDH-221ENST00000641573 RLIMQ9NVW2 624 aa12.09□□□□□ -0.47
PHGDH-221ENST00000641573 ACAD8Q9UKU7 415 aa12.09□□□□□ -0.47
PHGDH-221ENST00000641573 A4GNTQ9UNA3 340 aa12.09□□□□□ -0.47
PHGDH-221ENST00000641573 PTRH2Q9Y3E5 179 aaKnown RBP12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms