RNA–Protein interactions for RNA: ENST00000627587.2

PDLIM5-223, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-223ENST00000627587 RBM4BQ9BQ04 359 aaKnown RBP8.79□□□□□ -1
PDLIM5-223ENST00000627587 RBM4Q9BWF3 364 aaKnown RBP8.79□□□□□ -1
PDLIM5-223ENST00000627587 PINK1Q9BXM7 581 aa8.79□□□□□ -1
PDLIM5-223ENST00000627587 SAP130Q9H0E3 1048 aa8.79□□□□□ -1
PDLIM5-223ENST00000627587 GABARAPL1Q9H0R8 117 aa8.79□□□□□ -1
PDLIM5-223ENST00000627587 MTHFD2LQ9H903 347 aaPredicted RBP8.79□□□□□ -1
PDLIM5-223ENST00000627587 GPN2Q9H9Y4 310 aaPredicted RBP8.79□□□□□ -1
PDLIM5-223ENST00000627587 FOLH1BQ9HBA9 442 aa8.79□□□□□ -1
PDLIM5-223ENST00000627587 PNO1Q9NRX1 252 aaKnown RBP8.79□□□□□ -1
PDLIM5-223ENST00000627587 SMPD3Q9NY59 655 aaPredicted RBP8.79□□□□□ -1
PDLIM5-223ENST00000627587 USE1Q9NZ43 259 aa8.79□□□□□ -1
PDLIM5-223ENST00000627587 KCND3Q9UK17 655 aa8.79□□□□□ -1
PDLIM5-223ENST00000627587 SLC13A4Q9UKG4 626 aa8.79□□□□□ -1
PDLIM5-223ENST00000627587 SLC9A8Q9Y2E8 581 aa8.79□□□□□ -1
PDLIM5-223ENST00000627587 GPR55Q9Y2T6 319 aaPredicted RBP8.79□□□□□ -1
PDLIM5-223ENST00000627587 IFT52Q9Y366 437 aa8.79□□□□□ -1
PDLIM5-223ENST00000627587 CLCA3PQ9Y6N3 262 aa8.79□□□□□ -1
PDLIM5-223ENST00000627587 ENPP4Q9Y6X5 453 aa8.79□□□□□ -1
PDLIM5-223ENST00000627587 TLN1Q9Y490 2541 aaKnown RBP8.78□□□□□ -1
PDLIM5-223ENST00000627587 SDK2Q58EX2 2172 aa8.78□□□□□ -1
PDLIM5-223ENST00000627587 HEATR5AQ86XA9 2040 aa8.78□□□□□ -1
PDLIM5-223ENST00000627587 TTC36A6NLP5 189 aa8.78□□□□□ -1
PDLIM5-223ENST00000627587 CLDN24A6NM45 220 aa8.78□□□□□ -1
PDLIM5-223ENST00000627587 M0R3H8 397 aa8.78□□□□□ -1
PDLIM5-223ENST00000627587 TPST2O60704 377 aa8.78□□□□□ -1
PDLIM5-223ENST00000627587 CPNE3O75131 537 aaKnown RBP8.78□□□□□ -1
PDLIM5-223ENST00000627587 STX11O75558 287 aa8.78□□□□□ -1
PDLIM5-223ENST00000627587 DNAJB5O75953 348 aa8.78□□□□□ -1
PDLIM5-223ENST00000627587 DDAH2O95865 285 aa8.78□□□□□ -1
PDLIM5-223ENST00000627587 LGI1O95970 557 aa8.78□□□□□ -1
PDLIM5-223ENST00000627587 DAPP51397 102 aa8.78□□□□□ -1
PDLIM5-223ENST00000627587 SPIBQ01892 262 aa8.78□□□□□ -1
PDLIM5-223ENST00000627587 ELAVL1Q15717 326 aaKnown RBP8.78□□□□□ -1
PDLIM5-223ENST00000627587 MAPK14Q16539 360 aa8.78□□□□□ -1
PDLIM5-223ENST00000627587 SLC36A3Q495N2 470 aa8.78□□□□□ -1
PDLIM5-223ENST00000627587 UGT2A3Q6UWM9 527 aa8.78□□□□□ -1
PDLIM5-223ENST00000627587 SHISA6Q6ZSJ9 500 aa8.78□□□□□ -1
PDLIM5-223ENST00000627587 LANCL3Q6ZV70 420 aa8.78□□□□□ -1
PDLIM5-223ENST00000627587 CARM1Q86X55 608 aa8.78□□□□□ -1
PDLIM5-223ENST00000627587 OR7G1Q8NGA0 311 aa8.78□□□□□ -1
PDLIM5-223ENST00000627587 OR52P1PQ8NH57 321 aa8.78□□□□□ -1
PDLIM5-223ENST00000627587 VANGL1Q8TAA9 524 aaPredicted RBP8.78□□□□□ -1
PDLIM5-223ENST00000627587 STT3BQ8TCJ2 826 aa8.78□□□□□ -1
PDLIM5-223ENST00000627587 DAZLQ92904 295 aaKnown RBP8.78□□□□□ -1
PDLIM5-223ENST00000627587 FBXL20Q96IG2 436 aa8.78□□□□□ -1
PDLIM5-223ENST00000627587 MBOAT4Q96T53 435 aa8.78□□□□□ -1
PDLIM5-223ENST00000627587 EPYCQ99645 322 aa8.78□□□□□ -1
PDLIM5-223ENST00000627587 PIP5K1AQ99755 562 aa8.78□□□□□ -1
PDLIM5-223ENST00000627587 OR10A5Q9H207 317 aa8.78□□□□□ -1
PDLIM5-223ENST00000627587 ACER3Q9NUN7 267 aa8.78□□□□□ -1
PDLIM5-223ENST00000627587 C14orf105Q9NVL8 296 aa8.78□□□□□ -1
PDLIM5-223ENST00000627587 PRODH2Q9UF12 536 aa8.78□□□□□ -1
PDLIM5-223ENST00000627587 ACAD8Q9UKU7 415 aa8.78□□□□□ -1
PDLIM5-223ENST00000627587 TESMINQ9Y4I5 508 aa8.78□□□□□ -1
PDLIM5-223ENST00000627587 A8MUA0 341 aa8.77□□□□□ -1.01
PDLIM5-223ENST00000627587 TNFRSF11BO00300 401 aa8.77□□□□□ -1.01
PDLIM5-223ENST00000627587 SYT5O00445 386 aa8.77□□□□□ -1.01
PDLIM5-223ENST00000627587 PRKNO60260 465 aaPredicted RBP8.77□□□□□ -1.01
PDLIM5-223ENST00000627587 KIAA0513O60268 411 aa8.77□□□□□ -1.01
PDLIM5-223ENST00000627587 BCAS1O75363 584 aaPredicted RBP8.77□□□□□ -1.01
PDLIM5-223ENST00000627587 KCNK2O95069 426 aa8.77□□□□□ -1.01
PDLIM5-223ENST00000627587 ZGLP1P0C6A0 271 aa8.77□□□□□ -1.01
PDLIM5-223ENST00000627587 PRKAR1BP31321 381 aa8.77□□□□□ -1.01
PDLIM5-223ENST00000627587 HMGA2P52926 109 aa8.77□□□□□ -1.01
PDLIM5-223ENST00000627587 SLC37A1P57057 533 aa8.77□□□□□ -1.01
PDLIM5-223ENST00000627587 ADARB1P78563 741 aaKnown RBP8.77□□□□□ -1.01
PDLIM5-223ENST00000627587 MERTKQ12866 999 aa8.77□□□□□ -1.01
PDLIM5-223ENST00000627587 LARS2Q15031 903 aaKnown RBP8.77□□□□□ -1.01
PDLIM5-223ENST00000627587 GPR68Q15743 365 aa8.77□□□□□ -1.01
PDLIM5-223ENST00000627587 SWT1Q5T5J6 900 aaKnown RBP8.77□□□□□ -1.01
PDLIM5-223ENST00000627587 FIGNL1Q6PIW4 674 aa8.77□□□□□ -1.01
PDLIM5-223ENST00000627587 LSRQ86X29 649 aaPredicted RBP8.77□□□□□ -1.01
PDLIM5-223ENST00000627587 ZNF619Q8N2I2 560 aa8.77□□□□□ -1.01
PDLIM5-223ENST00000627587 CLIP4Q8N3C7 705 aa8.77□□□□□ -1.01
PDLIM5-223ENST00000627587 PLPP5Q8NEB5 264 aa8.77□□□□□ -1.01
PDLIM5-223ENST00000627587 OR6T1Q8NGN1 323 aa8.77□□□□□ -1.01
PDLIM5-223ENST00000627587 ZNF721Q8TF20 911 aa8.77□□□□□ -1.01
PDLIM5-223ENST00000627587 PHF10Q8WUB8 498 aaKnown RBP8.77□□□□□ -1.01
PDLIM5-223ENST00000627587 PMM1Q92871 262 aa8.77□□□□□ -1.01
PDLIM5-223ENST00000627587 SENP5Q96HI0 755 aaPredicted RBP8.77□□□□□ -1.01
PDLIM5-223ENST00000627587 ART5Q96L15 291 aa8.77□□□□□ -1.01
PDLIM5-223ENST00000627587 DHRS1Q96LJ7 313 aa8.77□□□□□ -1.01
PDLIM5-223ENST00000627587 RDH12Q96NR8 316 aa8.77□□□□□ -1.01
PDLIM5-223ENST00000627587 NR1H4Q96RI1 486 aaPredicted RBP8.77□□□□□ -1.01
PDLIM5-223ENST00000627587 FUZQ9BT04 418 aa8.77□□□□□ -1.01
PDLIM5-223ENST00000627587 ADI1Q9BV57 179 aa8.77□□□□□ -1.01
PDLIM5-223ENST00000627587 ANKRD60Q9BZ19 345 aa8.77□□□□□ -1.01
PDLIM5-223ENST00000627587 Q9N2J8 555 aa8.77□□□□□ -1.01
PDLIM5-223ENST00000627587 POLE3Q9NRF9 147 aa8.77□□□□□ -1.01
PDLIM5-223ENST00000627587 RLIMQ9NVW2 624 aa8.77□□□□□ -1.01
PDLIM5-223ENST00000627587 KLHL28Q9NXS3 571 aa8.77□□□□□ -1.01
PDLIM5-223ENST00000627587 RHCGQ9UBD6 479 aa8.77□□□□□ -1.01
PDLIM5-223ENST00000627587 A4GNTQ9UNA3 340 aa8.77□□□□□ -1.01
PDLIM5-223ENST00000627587 ZNF232Q9UNY5 417 aa8.77□□□□□ -1.01
PDLIM5-223ENST00000627587 CFL2Q9Y281 166 aa8.77□□□□□ -1.01
PDLIM5-223ENST00000627587 ORC6Q9Y5N6 252 aa8.77□□□□□ -1.01
PDLIM5-223ENST00000627587 NPIPA5A0A0B4J1W7 369 aa8.77□□□□□ -1.01
PDLIM5-223ENST00000627587 CLEC18AA5D8T8 446 aa8.77□□□□□ -1.01
PDLIM5-223ENST00000627587 AGAP5A6NIR3 686 aa8.77□□□□□ -1.01
PDLIM5-223ENST00000627587 VSTM2BA6NLU5 285 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms