RNA–Protein interactions for RNA: ENST00000616865.4

UBXN1-218, Transcript of UBX domain protein 1, humanhuman

TSL 5 BASIC

Gene UBXN1, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-218ENST00000616865 PSMD4P55036 377 aaKnown RBP13.6□□□□□ -0.23
UBXN1-218ENST00000616865 HPCAP84074 193 aa13.6□□□□□ -0.23
UBXN1-218ENST00000616865 SLC25A3Q00325 362 aa13.6□□□□□ -0.23
UBXN1-218ENST00000616865 PSG6Q00889 435 aa13.6□□□□□ -0.23
UBXN1-218ENST00000616865 TFF3Q07654 80 aa13.6□□□□□ -0.23
UBXN1-218ENST00000616865 KRTAP21-3Q3LHN1 58 aa13.6□□□□□ -0.23
UBXN1-218ENST00000616865 CYP27C1Q4G0S4 372 aa13.6□□□□□ -0.23
UBXN1-218ENST00000616865 GPAT3Q53EU6 434 aa13.6□□□□□ -0.23
UBXN1-218ENST00000616865 CT45A2Q5DJT8 189 aa13.6□□□□□ -0.23
UBXN1-218ENST00000616865 CMPK2Q5EBM0 449 aa13.6□□□□□ -0.23
UBXN1-218ENST00000616865 GCNT6Q5T4J0 391 aa13.6□□□□□ -0.23
UBXN1-218ENST00000616865 C6orf89Q6UWU4 347 aa13.6□□□□□ -0.23
UBXN1-218ENST00000616865 NPSR1Q6W5P4 371 aa13.6□□□□□ -0.23
UBXN1-218ENST00000616865 PRR22Q8IZ63 422 aa13.6□□□□□ -0.23
UBXN1-218ENST00000616865 CYP4Z2PQ8N1L4 340 aa13.6□□□□□ -0.23
UBXN1-218ENST00000616865 ZNF441Q8N8Z8 693 aa13.6□□□□□ -0.23
UBXN1-218ENST00000616865 ZFP62Q8NB50 900 aaPredicted RBP13.6□□□□□ -0.23
UBXN1-218ENST00000616865 ASB5Q8WWX0 329 aa13.6□□□□□ -0.23
UBXN1-218ENST00000616865 PIK3R3Q92569 461 aa13.6□□□□□ -0.23
UBXN1-218ENST00000616865 RAB8BQ92930 207 aa13.6□□□□□ -0.23
UBXN1-218ENST00000616865 SLC35A4Q96G79 324 aa13.6□□□□□ -0.23
UBXN1-218ENST00000616865 TP63Q9H3D4 680 aaPredicted RBP13.6□□□□□ -0.23
UBXN1-218ENST00000616865 NPDC1Q9NQX5 325 aaPredicted RBP13.6□□□□□ -0.23
UBXN1-218ENST00000616865 PLSCR2Q9NRY7 297 aa13.6□□□□□ -0.23
UBXN1-218ENST00000616865 GIN1Q9NXP7 522 aa13.6□□□□□ -0.23
UBXN1-218ENST00000616865 P2RX2Q9UBL9 471 aa13.6□□□□□ -0.23
UBXN1-218ENST00000616865 RNF6Q9Y252 685 aa13.6□□□□□ -0.23
UBXN1-218ENST00000616865 HRH3Q9Y5N1 445 aa13.6□□□□□ -0.23
UBXN1-218ENST00000616865 NPFFR2Q9Y5X5 522 aa13.6□□□□□ -0.23
UBXN1-218ENST00000616865 NF1P21359 2839 aa13.6□□□□□ -0.23
UBXN1-218ENST00000616865 GXYLT2A0PJZ3 443 aa13.59□□□□□ -0.23
UBXN1-218ENST00000616865 NKX2-6A6NCS4 301 aa13.59□□□□□ -0.23
UBXN1-218ENST00000616865 FAM90A27PA6NNH2 459 aa13.59□□□□□ -0.23
UBXN1-218ENST00000616865 A8MVJ9 347 aa13.59□□□□□ -0.23
UBXN1-218ENST00000616865 C5orf58C9J3I9 102 aa13.59□□□□□ -0.23
UBXN1-218ENST00000616865 PEX1O43933 1283 aa13.59□□□□□ -0.23
UBXN1-218ENST00000616865 AK1P00568 194 aa13.59□□□□□ -0.23
UBXN1-218ENST00000616865 C1QCP02747 245 aa13.59□□□□□ -0.23
UBXN1-218ENST00000616865 T-ENOLP0DO92 83 aa13.59□□□□□ -0.23
UBXN1-218ENST00000616865 MSX1P28360 303 aa13.59□□□□□ -0.23
UBXN1-218ENST00000616865 CHRNB4P30926 498 aa13.59□□□□□ -0.23
UBXN1-218ENST00000616865 SLC7A2P52569 658 aa13.59□□□□□ -0.23
UBXN1-218ENST00000616865 MRPS22P82650 360 aaKnown RBP13.59□□□□□ -0.23
UBXN1-218ENST00000616865 BNIP1Q12981 228 aa13.59□□□□□ -0.23
UBXN1-218ENST00000616865 SELPLGQ14242 412 aa13.59□□□□□ -0.23
UBXN1-218ENST00000616865 GNA13Q14344 377 aa13.59□□□□□ -0.23
UBXN1-218ENST00000616865 RABL3Q5HYI8 236 aa13.59□□□□□ -0.23
UBXN1-218ENST00000616865 TMEM211Q6ICI0 200 aa13.59□□□□□ -0.23
UBXN1-218ENST00000616865 ARHGAP11AQ6P4F7 1023 aa13.59□□□□□ -0.23
UBXN1-218ENST00000616865 RINLQ6ZS11 566 aa13.59□□□□□ -0.23
UBXN1-218ENST00000616865 DEFB107AQ8IZN7 70 aa13.59□□□□□ -0.23
UBXN1-218ENST00000616865 PGAM4Q8N0Y7 254 aa13.59□□□□□ -0.23
UBXN1-218ENST00000616865 TMBIM1Q969X1 311 aa13.59□□□□□ -0.23
UBXN1-218ENST00000616865 OMA1Q96E52 524 aa13.59□□□□□ -0.23
UBXN1-218ENST00000616865 RASL10BQ96S79 203 aa13.59□□□□□ -0.23
UBXN1-218ENST00000616865 G6PC3Q9BUM1 346 aa13.59□□□□□ -0.23
UBXN1-218ENST00000616865 SERHL2Q9H4I8 314 aa13.59□□□□□ -0.23
UBXN1-218ENST00000616865 PIF1Q9H611 641 aa13.59□□□□□ -0.23
UBXN1-218ENST00000616865 CACYBPQ9HB71 228 aaKnown RBP13.59□□□□□ -0.23
UBXN1-218ENST00000616865 SPAG4Q9NPE6 437 aa13.59□□□□□ -0.23
UBXN1-218ENST00000616865 RYDENQ9NUL5 291 aaKnown RBP13.59□□□□□ -0.23
UBXN1-218ENST00000616865 TNFRSF10DQ9UBN6 386 aa13.59□□□□□ -0.23
UBXN1-218ENST00000616865 LIPT1Q9Y234 373 aa13.59□□□□□ -0.23
UBXN1-218ENST00000616865 PHF3Q92576 2039 aaKnown RBP13.59□□□□□ -0.23
UBXN1-218ENST00000616865 TMEM200CA6NKL6 621 aa13.58□□□□□ -0.24
UBXN1-218ENST00000616865 HMGN4O00479 90 aa13.58□□□□□ -0.24
UBXN1-218ENST00000616865 TO15178 435 aa13.58□□□□□ -0.24
UBXN1-218ENST00000616865 GYG2O15488 501 aa13.58□□□□□ -0.24
UBXN1-218ENST00000616865 GPX2P18283 190 aa13.58□□□□□ -0.24
UBXN1-218ENST00000616865 SLC6A2P23975 617 aa13.58□□□□□ -0.24
UBXN1-218ENST00000616865 ABCD3P28288 659 aa13.58□□□□□ -0.24
UBXN1-218ENST00000616865 PIGAP37287 484 aa13.58□□□□□ -0.24
UBXN1-218ENST00000616865 SOX3P41225 446 aa13.58□□□□□ -0.24
UBXN1-218ENST00000616865 MAN2A2P49641 1150 aa13.58□□□□□ -0.24
UBXN1-218ENST00000616865 GPR85P60893 370 aa13.58□□□□□ -0.24
UBXN1-218ENST00000616865 RPP38P78345 283 aaKnown RBP13.58□□□□□ -0.24
UBXN1-218ENST00000616865 DCST2Q5T1A1 773 aa13.58□□□□□ -0.24
UBXN1-218ENST00000616865 FIGNL1Q6PIW4 674 aa13.58□□□□□ -0.24
UBXN1-218ENST00000616865 IL20RBQ6UXL0 311 aa13.58□□□□□ -0.24
UBXN1-218ENST00000616865 IFNEQ86WN2 208 aa13.58□□□□□ -0.24
UBXN1-218ENST00000616865 DND1Q8IYX4 353 aaKnown RBP13.58□□□□□ -0.24
UBXN1-218ENST00000616865 RPRMLQ8N4K4 120 aa13.58□□□□□ -0.24
UBXN1-218ENST00000616865 RBM15BQ8NDT2 890 aaKnown RBP13.58□□□□□ -0.24
UBXN1-218ENST00000616865 FAM13CQ8NE31 585 aa13.58□□□□□ -0.24
UBXN1-218ENST00000616865 OR4N2Q8NGD1 307 aa13.58□□□□□ -0.24
UBXN1-218ENST00000616865 OR5M3Q8NGP4 307 aa13.58□□□□□ -0.24
UBXN1-218ENST00000616865 OR10A6Q8NH74 314 aa13.58□□□□□ -0.24
UBXN1-218ENST00000616865 LILRB4Q8NHJ6 448 aa13.58□□□□□ -0.24
UBXN1-218ENST00000616865 RND1Q92730 232 aa13.58□□□□□ -0.24
UBXN1-218ENST00000616865 HOXB13Q92826 284 aaPredicted RBP13.58□□□□□ -0.24
UBXN1-218ENST00000616865 COL21A1Q96P44 957 aa13.58□□□□□ -0.24
UBXN1-218ENST00000616865 GPATCH1Q9BRR8 931 aaKnown RBP13.58□□□□□ -0.24
UBXN1-218ENST00000616865 SPATA9Q9BWV2 254 aa13.58□□□□□ -0.24
UBXN1-218ENST00000616865 IKZF5Q9H5V7 419 aa13.58□□□□□ -0.24
UBXN1-218ENST00000616865 HPF1Q9NWY4 346 aa13.58□□□□□ -0.24
UBXN1-218ENST00000616865 CALML5Q9NZT1 146 aa13.58□□□□□ -0.24
UBXN1-218ENST00000616865 GMEB1Q9Y692 573 aa13.58□□□□□ -0.24
UBXN1-218ENST00000616865 SETD2Q9BYW2 2564 aaPredicted RBP13.58□□□□□ -0.24
UBXN1-218ENST00000616865 TP53I11O14683 189 aa13.57□□□□□ -0.24
UBXN1-218ENST00000616865 GSTA4O15217 222 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms