RNA–Protein interactions for RNA: ENST00000600689.1

UPF1-210, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 2

Gene UPF1, Length 3,084 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-210ENST00000600689 PCYT1BQ9Y5K3 369 aaPredicted RBP17.15■□□□□ 0.34
UPF1-210ENST00000600689 DAPL1A0PJW8 107 aa17.14■□□□□ 0.33
UPF1-210ENST00000600689 GPR171O14626 319 aa17.14■□□□□ 0.33
UPF1-210ENST00000600689 RGS9O75916 674 aaPredicted RBP17.14■□□□□ 0.33
UPF1-210ENST00000600689 GCGRP47871 477 aa17.14■□□□□ 0.33
UPF1-210ENST00000600689 TAGLNQ01995 201 aaKnown RBP17.14■□□□□ 0.33
UPF1-210ENST00000600689 RNLSQ5VYX0 342 aa17.14■□□□□ 0.33
UPF1-210ENST00000600689 FAAP20Q6NZ36 180 aa17.14■□□□□ 0.33
UPF1-210ENST00000600689 RTL4Q6ZR62 310 aa17.14■□□□□ 0.33
UPF1-210ENST00000600689 SLC51BQ86UW2 128 aa17.14■□□□□ 0.33
UPF1-210ENST00000600689 SERPINA12Q8IW75 414 aa17.14■□□□□ 0.33
UPF1-210ENST00000600689 CYB561A3Q8NBI2 242 aa17.14■□□□□ 0.33
UPF1-210ENST00000600689 UXS1Q8NBZ7 420 aa17.14■□□□□ 0.33
UPF1-210ENST00000600689 WDR89Q96FK6 387 aaPredicted RBP17.14■□□□□ 0.33
UPF1-210ENST00000600689 COQ10AQ96MF6 247 aa17.14■□□□□ 0.33
UPF1-210ENST00000600689 HCAR1Q9BXC0 346 aa17.14■□□□□ 0.33
UPF1-210ENST00000600689 OR10A4Q9H209 315 aa17.14■□□□□ 0.33
UPF1-210ENST00000600689 CYSLTR2Q9NS75 346 aa17.14■□□□□ 0.33
UPF1-210ENST00000600689 WSB2Q9NYS7 404 aaPredicted RBP17.14■□□□□ 0.33
UPF1-210ENST00000600689 HNRNPCL2B2RXH8 293 aa17.14■□□□□ 0.33
UPF1-210ENST00000600689 M0R233 179 aa17.14■□□□□ 0.33
UPF1-210ENST00000600689 SERPINI2O75830 405 aa17.14■□□□□ 0.33
UPF1-210ENST00000600689 IFNA7P01567 189 aa17.14■□□□□ 0.33
UPF1-210ENST00000600689 ALDOBP05062 364 aa17.14■□□□□ 0.33
UPF1-210ENST00000600689 CTSLP07711 333 aa17.14■□□□□ 0.33
UPF1-210ENST00000600689 PTHLHP12272 177 aa17.14■□□□□ 0.33
UPF1-210ENST00000600689 SSR2P43308 183 aa17.14■□□□□ 0.33
UPF1-210ENST00000600689 ZNF697Q5TEC3 545 aa17.14■□□□□ 0.33
UPF1-210ENST00000600689 ZDHHC20Q5W0Z9 365 aa17.14■□□□□ 0.33
UPF1-210ENST00000600689 LIPIQ6XZB0 460 aa17.14■□□□□ 0.33
UPF1-210ENST00000600689 MS4A15Q8N5U1 240 aa17.14■□□□□ 0.33
UPF1-210ENST00000600689 ZNF485Q8NCK3 441 aa17.14■□□□□ 0.33
UPF1-210ENST00000600689 SCMH1Q96GD3 660 aa17.14■□□□□ 0.33
UPF1-210ENST00000600689 CCDC86Q9H6F5 360 aaKnown RBP17.14■□□□□ 0.33
UPF1-210ENST00000600689 NEUROD4Q9HD90 331 aa17.14■□□□□ 0.33
UPF1-210ENST00000600689 ACAD8Q9UKU7 415 aa17.14■□□□□ 0.33
UPF1-210ENST00000600689 RPS10-NUDT3A0A1W2PQS6 291 aa17.13■□□□□ 0.33
UPF1-210ENST00000600689 CHST10O43529 356 aa17.13■□□□□ 0.33
UPF1-210ENST00000600689 H2AFB2P0C5Z0 115 aa17.13■□□□□ 0.33
UPF1-210ENST00000600689 HCCSP53701 268 aa17.13■□□□□ 0.33
UPF1-210ENST00000600689 EFNB1P98172 346 aa17.13■□□□□ 0.33
UPF1-210ENST00000600689 HSF2Q03933 536 aa17.13■□□□□ 0.33
UPF1-210ENST00000600689 ARHGAP15Q53QZ3 475 aa17.13■□□□□ 0.33
UPF1-210ENST00000600689 KIAA1324Q6UXG2 1013 aaKnown RBP17.13■□□□□ 0.33
UPF1-210ENST00000600689 FAM83HQ6ZRV2 1179 aaPredicted RBP17.13■□□□□ 0.33
UPF1-210ENST00000600689 C17orf64Q86WR6 236 aa17.13■□□□□ 0.33
UPF1-210ENST00000600689 LRRC28Q86X40 367 aaPredicted RBP17.13■□□□□ 0.33
UPF1-210ENST00000600689 KRT78Q8N1N4 520 aa17.13■□□□□ 0.33
UPF1-210ENST00000600689 C17orf47Q8NEP4 570 aa17.13■□□□□ 0.33
UPF1-210ENST00000600689 FGF11Q92914 225 aa17.13■□□□□ 0.33
UPF1-210ENST00000600689 COL26A1Q96A83 441 aa17.13■□□□□ 0.33
UPF1-210ENST00000600689 NXPE2Q96DL1 559 aa17.13■□□□□ 0.33
UPF1-210ENST00000600689 LINC00052Q96N35 136 aa17.13■□□□□ 0.33
UPF1-210ENST00000600689 DPH7Q9BTV6 452 aa17.13■□□□□ 0.33
UPF1-210ENST00000600689 BRD7Q9NPI1 651 aa17.13■□□□□ 0.33
UPF1-210ENST00000600689 RWDD3Q9Y3V2 267 aa17.13■□□□□ 0.33
UPF1-210ENST00000600689 TEX51A0A1B0GUA7 166 aa17.13■□□□□ 0.33
UPF1-210ENST00000600689 PRR23AA6NEV1 266 aa17.13■□□□□ 0.33
UPF1-210ENST00000600689 GRM6O15303 877 aa17.13■□□□□ 0.33
UPF1-210ENST00000600689 ADH1AP07327 375 aa17.13■□□□□ 0.33
UPF1-210ENST00000600689 CLUP10909 449 aa17.13■□□□□ 0.33
UPF1-210ENST00000600689 TYRP14679 529 aa17.13■□□□□ 0.33
UPF1-210ENST00000600689 POU3F2P20265 443 aaPredicted RBP17.13■□□□□ 0.33
UPF1-210ENST00000600689 MAPK9P45984 424 aa17.13■□□□□ 0.33
UPF1-210ENST00000600689 OC90Q02509 493 aaPredicted RBP17.13■□□□□ 0.33
UPF1-210ENST00000600689 NDUFA9Q16795 377 aa17.13■□□□□ 0.33
UPF1-210ENST00000600689 C1orf53Q5VUE5 145 aa17.13■□□□□ 0.33
UPF1-210ENST00000600689 GPR139Q6DWJ6 353 aa17.13■□□□□ 0.33
UPF1-210ENST00000600689 VN1R2Q8NFZ6 395 aa17.13■□□□□ 0.33
UPF1-210ENST00000600689 PIGXQ8TBF5 258 aa17.13■□□□□ 0.33
UPF1-210ENST00000600689 GNPDA2Q8TDQ7 276 aa17.13■□□□□ 0.33
UPF1-210ENST00000600689 RFKQ969G6 155 aa17.13■□□□□ 0.33
UPF1-210ENST00000600689 SORCS2Q96PQ0 1159 aa17.13■□□□□ 0.33
UPF1-210ENST00000600689 TRAF4Q9BUZ4 470 aaPredicted RBP17.13■□□□□ 0.33
UPF1-210ENST00000600689 ENKD1Q9H0I2 346 aa17.13■□□□□ 0.33
UPF1-210ENST00000600689 NT5DC2Q9H857 520 aa17.13■□□□□ 0.33
UPF1-210ENST00000600689 TM7SF3Q9NS93 570 aa17.13■□□□□ 0.33
UPF1-210ENST00000600689 CDC42EP2O14613 210 aa17.12■□□□□ 0.33
UPF1-210ENST00000600689 PGRMC2O15173 223 aa17.12■□□□□ 0.33
UPF1-210ENST00000600689 WNT1P04628 370 aa17.12■□□□□ 0.33
UPF1-210ENST00000600689 HK1P19367 917 aa17.12■□□□□ 0.33
UPF1-210ENST00000600689 BSGP35613 385 aa17.12■□□□□ 0.33
UPF1-210ENST00000600689 PUDPQ08623 228 aa17.12■□□□□ 0.33
UPF1-210ENST00000600689 CAMK2DQ13557 499 aa17.12■□□□□ 0.33
UPF1-210ENST00000600689 ENTPD8Q5MY95 495 aa17.12■□□□□ 0.33
UPF1-210ENST00000600689 C9orf64Q5T6V5 341 aa17.12■□□□□ 0.33
UPF1-210ENST00000600689 NDUFAF5Q5TEU4 345 aa17.12■□□□□ 0.33
UPF1-210ENST00000600689 CXXC5Q7LFL8 322 aaKnown RBP17.12■□□□□ 0.33
UPF1-210ENST00000600689 COQ8AQ8NI60 647 aa17.12■□□□□ 0.33
UPF1-210ENST00000600689 SGPP1Q9BX95 441 aa17.12■□□□□ 0.33
UPF1-210ENST00000600689 C11orf49Q9H6J7 331 aa17.12■□□□□ 0.33
UPF1-210ENST00000600689 A0A1W2PPL8 197 aa17.12■□□□□ 0.33
UPF1-210ENST00000600689 CHURC1-FNTBB4DL54 471 aa17.12■□□□□ 0.33
UPF1-210ENST00000600689 SURF4O15260 269 aa17.12■□□□□ 0.33
UPF1-210ENST00000600689 MOSPD3O75425 235 aa17.12■□□□□ 0.33
UPF1-210ENST00000600689 GSTM3P21266 225 aa17.12■□□□□ 0.33
UPF1-210ENST00000600689 RGS8P57771 180 aaPredicted RBP17.12■□□□□ 0.33
UPF1-210ENST00000600689 BTG1P62324 171 aa17.12■□□□□ 0.33
UPF1-210ENST00000600689 DUSP2Q05923 314 aa17.12■□□□□ 0.33
UPF1-210ENST00000600689 FUT5Q11128 374 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms