RNA–Protein interactions for RNA: ENST00000599699.2

SSBP4-206, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene SSBP4, Length 793 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-206ENST00000599699 KLF2Q9Y5W3 355 aaPredicted RBP25.59■■□□□ 1.69
SSBP4-206ENST00000599699 CCDC154A6NI56 674 aa25.58■■□□□ 1.69
SSBP4-206ENST00000599699 ZIC3O60481 467 aa25.58■■□□□ 1.69
SSBP4-206ENST00000599699 HTR1EP28566 365 aa25.58■■□□□ 1.69
SSBP4-206ENST00000599699 GANABQ14697 944 aaKnown RBP25.58■■□□□ 1.69
SSBP4-206ENST00000599699 SF3B4Q15427 424 aaKnown RBP eCLIP25.58■■□□□ 1.693e-9■■■■■ 31.4
SSBP4-206ENST00000599699 HSP90B2PQ58FF3 399 aa25.58■■□□□ 1.69
SSBP4-206ENST00000599699 RAET1LQ5VY80 246 aa25.58■■□□□ 1.69
SSBP4-206ENST00000599699 TNFAIP8L2Q6P589 184 aaPredicted RBP25.58■■□□□ 1.69
SSBP4-206ENST00000599699 C16orf62Q7Z3J2 963 aa25.58■■□□□ 1.69
SSBP4-206ENST00000599699 CCDC71Q8IV32 467 aaPredicted RBP25.58■■□□□ 1.69
SSBP4-206ENST00000599699 ZNF527Q8NB42 609 aa25.58■■□□□ 1.69
SSBP4-206ENST00000599699 GOT1L1Q8NHS2 421 aaPredicted RBP25.58■■□□□ 1.69
SSBP4-206ENST00000599699 ASB5Q8WWX0 329 aa25.58■■□□□ 1.69
SSBP4-206ENST00000599699 NEURL3Q96EH8 262 aa25.58■■□□□ 1.69
SSBP4-206ENST00000599699 WDYHV1Q96HA8 205 aa25.58■■□□□ 1.69
SSBP4-206ENST00000599699 CCDC28BQ9BUN5 200 aa25.58■■□□□ 1.69
SSBP4-206ENST00000599699 HOXD1Q9GZZ0 328 aa25.58■■□□□ 1.69
SSBP4-206ENST00000599699 EXD2Q9NVH0 621 aa25.58■■□□□ 1.69
SSBP4-206ENST00000599699 RNF6Q9Y252 685 aa25.58■■□□□ 1.69
SSBP4-206ENST00000599699 NPIPA5A0A0B4J1W7 369 aa25.57■■□□□ 1.68
SSBP4-206ENST00000599699 NPIPA7E9PJI5 369 aa25.57■■□□□ 1.68
SSBP4-206ENST00000599699 GSNP06396 782 aa25.57■■□□□ 1.68
SSBP4-206ENST00000599699 NPIPA8P0DM63 369 aa25.57■■□□□ 1.68
SSBP4-206ENST00000599699 CHRNB4P30926 498 aa25.57■■□□□ 1.68
SSBP4-206ENST00000599699 DCTP40126 519 aa25.57■■□□□ 1.68
SSBP4-206ENST00000599699 POLR2JP52435 117 aaKnown RBP25.57■■□□□ 1.68
SSBP4-206ENST00000599699 GFRA1P56159 465 aa25.57■■□□□ 1.68
SSBP4-206ENST00000599699 SRYQ05066 204 aa25.57■■□□□ 1.68
SSBP4-206ENST00000599699 CDSNQ15517 529 aa25.57■■□□□ 1.68
SSBP4-206ENST00000599699 ATAD3BQ5T9A4 648 aa25.57■■□□□ 1.68
SSBP4-206ENST00000599699 SAXO2Q658L1 398 aa25.57■■□□□ 1.68
SSBP4-206ENST00000599699 OR9I1Q8NGQ6 314 aa25.57■■□□□ 1.68
SSBP4-206ENST00000599699 XAGE5Q8WWM1 108 aa25.57■■□□□ 1.68
SSBP4-206ENST00000599699 C1GALT1C1Q96EU7 318 aa25.57■■□□□ 1.68
SSBP4-206ENST00000599699 THOC1Q96FV9 657 aaKnown RBP25.57■■□□□ 1.68
SSBP4-206ENST00000599699 IGLV3-32A0A0A0MS00 114 aa25.56■■□□□ 1.68
SSBP4-206ENST00000599699 RFXANKO14593 260 aa25.56■■□□□ 1.68
SSBP4-206ENST00000599699 AGR2O95994 175 aa25.56■■□□□ 1.68
SSBP4-206ENST00000599699 AK1P00568 194 aa25.56■■□□□ 1.68
SSBP4-206ENST00000599699 OR12D1P0DN82 309 aa25.56■■□□□ 1.68
SSBP4-206ENST00000599699 CDKN2CP42773 168 aa25.56■■□□□ 1.68
SSBP4-206ENST00000599699 STARP49675 285 aa25.56■■□□□ 1.68
SSBP4-206ENST00000599699 KHKP50053 298 aa25.56■■□□□ 1.68
SSBP4-206ENST00000599699 ACSF3Q4G176 576 aaPredicted RBP25.56■■□□□ 1.68
SSBP4-206ENST00000599699 MISPQ8IVT2 679 aa25.56■■□□□ 1.68
SSBP4-206ENST00000599699 ZNF614Q8N883 585 aa25.56■■□□□ 1.68
SSBP4-206ENST00000599699 MIPOL1Q8TD10 442 aa25.56■■□□□ 1.68
SSBP4-206ENST00000599699 SH3YL1Q96HL8 342 aaPredicted RBP25.56■■□□□ 1.68
SSBP4-206ENST00000599699 SDF2Q99470 211 aa25.56■■□□□ 1.68
SSBP4-206ENST00000599699 RMND5AQ9H871 391 aa25.56■■□□□ 1.68
SSBP4-206ENST00000599699 NCOA6Q14686 2063 aaPredicted RBP25.56■■□□□ 1.68
SSBP4-206ENST00000599699 FAM47E-STBD1D6RA91 191 aa25.55■■□□□ 1.68
SSBP4-206ENST00000599699 H0Y3Z8 333 aa25.55■■□□□ 1.68
SSBP4-206ENST00000599699 H3BNH8 94 aa25.55■■□□□ 1.68
SSBP4-206ENST00000599699 CHMP24386 653 aa25.55■■□□□ 1.68
SSBP4-206ENST00000599699 RNF144AP50876 292 aaPredicted RBP25.55■■□□□ 1.68
SSBP4-206ENST00000599699 TIGD2Q4W5G0 525 aa25.55■■□□□ 1.68
SSBP4-206ENST00000599699 DNAJC14Q6Y2X3 702 aaPredicted RBP25.55■■□□□ 1.68
SSBP4-206ENST00000599699 CHDHQ8NE62 594 aaPredicted RBP25.55■■□□□ 1.68
SSBP4-206ENST00000599699 PHOSPHO1Q8TCT1 267 aa25.55■■□□□ 1.68
SSBP4-206ENST00000599699 RAB8BQ92930 207 aa25.55■■□□□ 1.68
SSBP4-206ENST00000599699 TRIB1Q96RU8 372 aa25.55■■□□□ 1.68
SSBP4-206ENST00000599699 A0A1W2PQD3 144 aa25.54■■□□□ 1.68
SSBP4-206ENST00000599699 FAM234BA2RU67 622 aa25.54■■□□□ 1.68
SSBP4-206ENST00000599699 STX11O75558 287 aa25.54■■□□□ 1.68
SSBP4-206ENST00000599699 ANP32DO95626 131 aa25.54■■□□□ 1.68
SSBP4-206ENST00000599699 CPN1P15169 458 aa25.54■■□□□ 1.68
SSBP4-206ENST00000599699 MSX1P28360 303 aa25.54■■□□□ 1.68
SSBP4-206ENST00000599699 GRNP28799 593 aaKnown RBP25.54■■□□□ 1.68
SSBP4-206ENST00000599699 ATP12AP54707 1039 aa25.54■■□□□ 1.68
SSBP4-206ENST00000599699 RCAN2Q14206 197 aa25.54■■□□□ 1.68
SSBP4-206ENST00000599699 GPR68Q15743 365 aa25.54■■□□□ 1.68
SSBP4-206ENST00000599699 ZNF630Q2M218 657 aaPredicted RBP25.54■■□□□ 1.68
SSBP4-206ENST00000599699 SP5Q6BEB4 398 aaPredicted RBP25.54■■□□□ 1.68
SSBP4-206ENST00000599699 RNF130Q86XS8 419 aa25.54■■□□□ 1.68
SSBP4-206ENST00000599699 ARFGAP2Q8N6H7 521 aa25.54■■□□□ 1.68
SSBP4-206ENST00000599699 OR5M1Q8NGP8 315 aa25.54■■□□□ 1.68
SSBP4-206ENST00000599699 VPS33AQ96AX1 596 aa25.54■■□□□ 1.68
SSBP4-206ENST00000599699 CHST11Q9NPF2 352 aa25.54■■□□□ 1.68
SSBP4-206ENST00000599699 A0A0G2JNJ9 132 aa25.53■■□□□ 1.68
SSBP4-206ENST00000599699 HCRTR2O43614 444 aa25.53■■□□□ 1.68
SSBP4-206ENST00000599699 EDF1O60869 148 aaKnown RBP25.53■■□□□ 1.68
SSBP4-206ENST00000599699 EPPINO95925 133 aa25.53■■□□□ 1.68
SSBP4-206ENST00000599699 ADH7P40394 386 aa25.53■■□□□ 1.68
SSBP4-206ENST00000599699 ZFP36L2P47974 494 aaKnown RBP25.53■■□□□ 1.68
SSBP4-206ENST00000599699 LHX2P50458 406 aa25.53■■□□□ 1.68
SSBP4-206ENST00000599699 B3GALT5-AS1P59052 145 aa25.53■■□□□ 1.68
SSBP4-206ENST00000599699 CD226Q15762 336 aa25.53■■□□□ 1.68
SSBP4-206ENST00000599699 ARHGAP11BQ3KRB8 267 aa25.53■■□□□ 1.68
SSBP4-206ENST00000599699 KLHL26Q53HC5 615 aa25.53■■□□□ 1.68
SSBP4-206ENST00000599699 ZNF787Q6DD87 383 aa25.53■■□□□ 1.68
SSBP4-206ENST00000599699 ARSKQ6UWY0 536 aa25.53■■□□□ 1.68
SSBP4-206ENST00000599699 ITCHQ96J02 903 aa25.53■■□□□ 1.68
SSBP4-206ENST00000599699 PIGQQ9BRB3 760 aa25.53■■□□□ 1.68
SSBP4-206ENST00000599699 NPHS2Q9NP85 383 aa25.53■■□□□ 1.68
SSBP4-206ENST00000599699 Q9UFV3 132 aa25.53■■□□□ 1.68
SSBP4-206ENST00000599699 DCTN4Q9UJW0 460 aa25.53■■□□□ 1.68
SSBP4-206ENST00000599699 VDAC3Q9Y277 283 aa25.53■■□□□ 1.68
SSBP4-206ENST00000599699 FAM90A27PA6NNH2 459 aa25.52■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms