RNA–Protein interactions for RNA: ENST00000595756.1

HOMER3-208, Transcript of homer scaffold protein 3, humanhuman

TSL 2

Gene HOMER3, Length 570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-208ENST00000595756 CCDC28BQ9BUN5 200 aa16.22■□□□□ 0.19
HOMER3-208ENST00000595756 BHLHE41Q9C0J9 482 aaPredicted RBP16.22■□□□□ 0.19
HOMER3-208ENST00000595756 TCF7L2Q9NQB0 619 aa16.22■□□□□ 0.19
HOMER3-208ENST00000595756 AIG1Q9NVV5 245 aa16.22■□□□□ 0.19
HOMER3-208ENST00000595756 C19orf53Q9UNZ5 99 aaPredicted RBP16.22■□□□□ 0.19
HOMER3-208ENST00000595756 B4DXG7 233 aa16.21■□□□□ 0.19
HOMER3-208ENST00000595756 UBDO15205 165 aa16.21■□□□□ 0.19
HOMER3-208ENST00000595756 TROVE2P10155 538 aaKnown RBP eCLIP16.21■□□□□ 0.19
HOMER3-208ENST00000595756 DPP4P27487 766 aa16.21■□□□□ 0.19
HOMER3-208ENST00000595756 FRKP42685 505 aaPredicted RBP16.21■□□□□ 0.19
HOMER3-208ENST00000595756 AGFG1P52594 562 aaKnown RBP16.21■□□□□ 0.19
HOMER3-208ENST00000595756 AQP5P55064 265 aa16.21■□□□□ 0.19
HOMER3-208ENST00000595756 MANFP55145 182 aaKnown RBP16.21■□□□□ 0.19
HOMER3-208ENST00000595756 DSCR4P56555 118 aaPredicted RBP16.21■□□□□ 0.19
HOMER3-208ENST00000595756 EEF1A1P68104 462 aaKnown RBP16.21■□□□□ 0.19
HOMER3-208ENST00000595756 SRYQ05066 204 aa16.21■□□□□ 0.19
HOMER3-208ENST00000595756 FOXF2Q12947 444 aa16.21■□□□□ 0.19
HOMER3-208ENST00000595756 GANABQ14697 944 aaKnown RBP16.21■□□□□ 0.19
HOMER3-208ENST00000595756 MLC1Q15049 377 aa16.21■□□□□ 0.19
HOMER3-208ENST00000595756 LSM12Q3MHD2 195 aaKnown RBP16.21■□□□□ 0.19
HOMER3-208ENST00000595756 CYP27C1Q4G0S4 372 aa16.21■□□□□ 0.19
HOMER3-208ENST00000595756 EEF1A1P5Q5VTE0 462 aa16.21■□□□□ 0.19
HOMER3-208ENST00000595756 TMEM107Q6UX40 140 aa16.21■□□□□ 0.19
HOMER3-208ENST00000595756 PAMR1Q6UXH9 720 aa16.21■□□□□ 0.19
HOMER3-208ENST00000595756 MAVSQ7Z434 540 aa16.21■□□□□ 0.19
HOMER3-208ENST00000595756 OR2L13Q8N349 312 aa16.21■□□□□ 0.19
HOMER3-208ENST00000595756 FADS6Q8N9I5 356 aa16.21■□□□□ 0.19
HOMER3-208ENST00000595756 GLB1L3Q8NCI6 653 aaPredicted RBP16.21■□□□□ 0.19
HOMER3-208ENST00000595756 CHDHQ8NE62 594 aaPredicted RBP16.21■□□□□ 0.19
HOMER3-208ENST00000595756 VPS37AQ8NEZ2 397 aa16.21■□□□□ 0.19
HOMER3-208ENST00000595756 OR4K17Q8NGC6 315 aa16.21■□□□□ 0.19
HOMER3-208ENST00000595756 OR4N2Q8NGD1 307 aa16.21■□□□□ 0.19
HOMER3-208ENST00000595756 AMDHD1Q96NU7 426 aa16.21■□□□□ 0.19
HOMER3-208ENST00000595756 ZBTB18Q99592 522 aa16.21■□□□□ 0.19
HOMER3-208ENST00000595756 PIGMQ9H3S5 423 aa16.21■□□□□ 0.19
HOMER3-208ENST00000595756 CCM2LQ9NUG4 571 aaPredicted RBP16.21■□□□□ 0.19
HOMER3-208ENST00000595756 DDX18Q9NVP1 670 aaKnown RBP16.21■□□□□ 0.19
HOMER3-208ENST00000595756 PPP4R1LQ9P1A2 415 aa16.21■□□□□ 0.19
HOMER3-208ENST00000595756 UPK1AO00322 258 aa16.2■□□□□ 0.18
HOMER3-208ENST00000595756 VIMP08670 466 aaKnown RBP16.2■□□□□ 0.18
HOMER3-208ENST00000595756 ALDOCP09972 364 aaKnown RBP16.2■□□□□ 0.18
HOMER3-208ENST00000595756 DNASE1P24855 282 aa16.2■□□□□ 0.18
HOMER3-208ENST00000595756 GPC1P35052 558 aa16.2■□□□□ 0.18
HOMER3-208ENST00000595756 IDH3AP50213 366 aa16.2■□□□□ 0.18
HOMER3-208ENST00000595756 GAB1Q13480 694 aa16.2■□□□□ 0.18
HOMER3-208ENST00000595756 BCL2A1Q16548 175 aa16.2■□□□□ 0.18
HOMER3-208ENST00000595756 PRSS53Q2L4Q9 553 aa16.2■□□□□ 0.18
HOMER3-208ENST00000595756 OR5M10Q6IEU7 315 aa16.2■□□□□ 0.18
HOMER3-208ENST00000595756 GRAMD2AQ8IUY3 354 aa16.2■□□□□ 0.18
HOMER3-208ENST00000595756 OR7A2PQ8NGA2 310 aa16.2■□□□□ 0.18
HOMER3-208ENST00000595756 TESCQ96BS2 214 aa16.2■□□□□ 0.18
HOMER3-208ENST00000595756 ALPK1Q96QP1 1244 aa16.2■□□□□ 0.18
HOMER3-208ENST00000595756 OR52B2Q96RD2 323 aa16.2■□□□□ 0.18
HOMER3-208ENST00000595756 RBM24Q9BX46 236 aaKnown RBP16.2■□□□□ 0.18
HOMER3-208ENST00000595756 LIME1Q9H400 295 aa16.2■□□□□ 0.18
HOMER3-208ENST00000595756 GLIPR2Q9H4G4 154 aa16.2■□□□□ 0.18
HOMER3-208ENST00000595756 Q9N2J8 555 aa16.2■□□□□ 0.18
HOMER3-208ENST00000595756 GALNT8Q9NY28 637 aa16.2■□□□□ 0.18
HOMER3-208ENST00000595756 GPR45Q9Y5Y3 372 aa16.2■□□□□ 0.18
HOMER3-208ENST00000595756 MPDZO75970 2070 aa16.2■□□□□ 0.18
HOMER3-208ENST00000595756 A0A1W2PRB8 838 aa16.19■□□□□ 0.18
HOMER3-208ENST00000595756 SCO2O43819 266 aa16.19■□□□□ 0.18
HOMER3-208ENST00000595756 FADS1O60427 444 aa16.19■□□□□ 0.18
HOMER3-208ENST00000595756 ZIC3O60481 467 aa16.19■□□□□ 0.18
HOMER3-208ENST00000595756 CPA2P48052 419 aa16.19■□□□□ 0.18
HOMER3-208ENST00000595756 STARP49675 285 aa16.19■□□□□ 0.18
HOMER3-208ENST00000595756 B3GALT5-AS1P59052 145 aa16.19■□□□□ 0.18
HOMER3-208ENST00000595756 STX1BP61266 288 aa16.19■□□□□ 0.18
HOMER3-208ENST00000595756 LRRC74AQ0VAA2 488 aa16.19■□□□□ 0.18
HOMER3-208ENST00000595756 ZNHIT3Q15649 155 aaPredicted RBP16.19■□□□□ 0.18
HOMER3-208ENST00000595756 DECR1Q16698 335 aa16.19■□□□□ 0.18
HOMER3-208ENST00000595756 PDCD4Q53EL6 469 aaKnown RBP16.19■□□□□ 0.18
HOMER3-208ENST00000595756 ANXA8L1Q5VT79 327 aa16.19■□□□□ 0.18
HOMER3-208ENST00000595756 ANKRD26P1Q6NSI1 321 aa16.19■□□□□ 0.18
HOMER3-208ENST00000595756 GCNT2Q8N0V5 402 aa16.19■□□□□ 0.18
HOMER3-208ENST00000595756 KRTCAP2Q8N6L1 136 aa16.19■□□□□ 0.18
HOMER3-208ENST00000595756 OR2M3Q8NG83 312 aa16.19■□□□□ 0.18
HOMER3-208ENST00000595756 OR8J2Q8NGG1 315 aa16.19■□□□□ 0.18
HOMER3-208ENST00000595756 INTS12Q96CB8 462 aaKnown RBP16.19■□□□□ 0.18
HOMER3-208ENST00000595756 MBD6Q96DN6 1003 aa16.19■□□□□ 0.18
HOMER3-208ENST00000595756 LMF2Q9BU23 707 aaKnown RBP16.19■□□□□ 0.18
HOMER3-208ENST00000595756 DUSP26Q9BV47 211 aa16.19■□□□□ 0.18
HOMER3-208ENST00000595756 TMUB1Q9BVT8 246 aa16.19■□□□□ 0.18
HOMER3-208ENST00000595756 FAM120CQ9NX05 1096 aaKnown RBP16.19■□□□□ 0.18
HOMER3-208ENST00000595756 MRTO4Q9UKD2 239 aaKnown RBP16.19■□□□□ 0.18
HOMER3-208ENST00000595756 PACSIN3Q9UKS6 424 aa16.19■□□□□ 0.18
HOMER3-208ENST00000595756 FLNAP21333 2647 aaKnown RBP16.19■□□□□ 0.18
HOMER3-208ENST00000595756 ABCA4P78363 2273 aa16.19■□□□□ 0.18
HOMER3-208ENST00000595756 TTC36A6NLP5 189 aa16.18■□□□□ 0.18
HOMER3-208ENST00000595756 ANKRD28O15084 1053 aa16.18■□□□□ 0.18
HOMER3-208ENST00000595756 IL33O95760 270 aa16.18■□□□□ 0.18
HOMER3-208ENST00000595756 CRHP06850 196 aa16.18■□□□□ 0.18
HOMER3-208ENST00000595756 LAMP1P11279 417 aa16.18■□□□□ 0.18
HOMER3-208ENST00000595756 PEPDP12955 493 aa16.18■□□□□ 0.18
HOMER3-208ENST00000595756 PSMD4P55036 377 aaKnown RBP16.18■□□□□ 0.18
HOMER3-208ENST00000595756 PGS1Q32NB8 556 aa16.18■□□□□ 0.18
HOMER3-208ENST00000595756 ZNF385BQ569K4 471 aa16.18■□□□□ 0.18
HOMER3-208ENST00000595756 LUZP2Q86TE4 346 aa16.18■□□□□ 0.18
HOMER3-208ENST00000595756 TGIF2LYQ8IUE0 185 aa16.18■□□□□ 0.18
HOMER3-208ENST00000595756 LINC01560Q8TB33 94 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms