RNA–Protein interactions for RNA: ENST00000592790.1

VMP1-216, Transcript of vacuole membrane protein 1, humanhuman

Gene VMP1, Length 4,325 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-216ENST00000592790 PCDHB16Q9NRJ7 776 aa3.32□□□□□ -1.88
VMP1-216ENST00000592790 IMP3Q9NV31 184 aaKnown RBP3.32□□□□□ -1.88
VMP1-216ENST00000592790 TESQ9UGI8 421 aaKnown RBP3.32□□□□□ -1.88
VMP1-216ENST00000592790 KCND3Q9UK17 655 aa3.32□□□□□ -1.88
VMP1-216ENST00000592790 PPIEQ9UNP9 301 aaKnown RBP3.32□□□□□ -1.88
VMP1-216ENST00000592790 PLCL2Q9UPR0 1127 aa3.32□□□□□ -1.88
VMP1-216ENST00000592790 SLC6A5Q9Y345 797 aa3.32□□□□□ -1.88
VMP1-216ENST00000592790 OR10H1Q9Y4A9 318 aa3.32□□□□□ -1.88
VMP1-216ENST00000592790 CFAP20Q9Y6A4 193 aaKnown RBP3.32□□□□□ -1.88
VMP1-216ENST00000592790 FXYD6-FXYD2A0A087WZ82 144 aa3.32□□□□□ -1.88
VMP1-216ENST00000592790 TBC1D3EA0A087X179 549 aa3.32□□□□□ -1.88
VMP1-216ENST00000592790 TRBV2A0A0J9YWF9 115 aa3.32□□□□□ -1.88
VMP1-216ENST00000592790 MEGF11A6BM72 1044 aa3.32□□□□□ -1.88
VMP1-216ENST00000592790 OR2AT4A6NND4 320 aa3.32□□□□□ -1.88
VMP1-216ENST00000592790 CLDN4O14493 209 aa3.32□□□□□ -1.88
VMP1-216ENST00000592790 BET1O15155 118 aa3.32□□□□□ -1.88
VMP1-216ENST00000592790 SLC25A12O75746 678 aa3.32□□□□□ -1.88
VMP1-216ENST00000592790 F11P03951 625 aa3.32□□□□□ -1.88
VMP1-216ENST00000592790 C8AP07357 584 aa3.32□□□□□ -1.88
VMP1-216ENST00000592790 GNSP15586 552 aa3.32□□□□□ -1.88
VMP1-216ENST00000592790 NAGAP17050 411 aa3.32□□□□□ -1.88
VMP1-216ENST00000592790 ZNF8P17098 575 aaPredicted RBP3.32□□□□□ -1.88
VMP1-216ENST00000592790 NT5EP21589 574 aa3.32□□□□□ -1.88
VMP1-216ENST00000592790 APEX1P27695 318 aaKnown RBP3.32□□□□□ -1.88
VMP1-216ENST00000592790 MAT2AP31153 395 aaKnown RBP3.32□□□□□ -1.88
VMP1-216ENST00000592790 GKP32189 559 aa3.32□□□□□ -1.88
VMP1-216ENST00000592790 GUCA1AP43080 201 aaPredicted RBP3.32□□□□□ -1.88
VMP1-216ENST00000592790 SOX9P48436 509 aa3.32□□□□□ -1.88
VMP1-216ENST00000592790 SEC13P55735 322 aa3.32□□□□□ -1.88
VMP1-216ENST00000592790 WNT3P56703 355 aa3.32□□□□□ -1.88
VMP1-216ENST00000592790 POU6F2P78424 691 aaPredicted RBP3.32□□□□□ -1.88
VMP1-216ENST00000592790 CYCSP99999 105 aaKnown RBP3.32□□□□□ -1.88
VMP1-216ENST00000592790 E2F1Q01094 437 aa3.32□□□□□ -1.88
VMP1-216ENST00000592790 IFITM3Q01628 133 aa3.32□□□□□ -1.88
VMP1-216ENST00000592790 RIN1Q13671 783 aa3.32□□□□□ -1.88
VMP1-216ENST00000592790 BAK1Q16611 211 aa3.32□□□□□ -1.88
VMP1-216ENST00000592790 ZNF791Q3KP31 576 aaPredicted RBP3.32□□□□□ -1.88
VMP1-216ENST00000592790 ZNF648Q5T619 568 aaPredicted RBP3.32□□□□□ -1.88
VMP1-216ENST00000592790 HLA-DQA1Q5Y7H0 255 aa3.32□□□□□ -1.88
VMP1-216ENST00000592790 FAM205BPQ63HN1 556 aa3.32□□□□□ -1.88
VMP1-216ENST00000592790 GLT8D1Q68CQ7 371 aa3.32□□□□□ -1.88
VMP1-216ENST00000592790 DNM1P34Q6PK57 102 aa3.32□□□□□ -1.88
VMP1-216ENST00000592790 WASH2PQ6VEQ5 465 aa3.32□□□□□ -1.88
VMP1-216ENST00000592790 CPOQ8IVL8 374 aa3.32□□□□□ -1.88
VMP1-216ENST00000592790 CMTM8Q8IZV2 173 aa3.32□□□□□ -1.88
VMP1-216ENST00000592790 HDDC3Q8N4P3 179 aa3.32□□□□□ -1.88
VMP1-216ENST00000592790 IQCF1Q8N6M8 205 aa3.32□□□□□ -1.88
VMP1-216ENST00000592790 ZNF676Q8N7Q3 588 aa3.32□□□□□ -1.88
VMP1-216ENST00000592790 Q8N9G6 341 aaPredicted RBP3.32□□□□□ -1.88
VMP1-216ENST00000592790 AVL9Q8NBF6 648 aa3.32□□□□□ -1.88
VMP1-216ENST00000592790 KREMEN2Q8NCW0 462 aa3.32□□□□□ -1.88
VMP1-216ENST00000592790 WDR48Q8TAF3 677 aa3.32□□□□□ -1.88
VMP1-216ENST00000592790 ZNF417Q8TAU3 575 aa3.32□□□□□ -1.88
VMP1-216ENST00000592790 ADAMTS18Q8TE60 1221 aa3.32□□□□□ -1.88
VMP1-216ENST00000592790 ZFPM2Q8WW38 1151 aa3.32□□□□□ -1.88
VMP1-216ENST00000592790 RIT1Q92963 219 aa3.32□□□□□ -1.88
VMP1-216ENST00000592790 SCAMP4Q969E2 229 aa3.32□□□□□ -1.88
VMP1-216ENST00000592790 FAM46AQ96IP4 442 aaKnown RBP3.32□□□□□ -1.88
VMP1-216ENST00000592790 MYADMQ96S97 322 aa3.32□□□□□ -1.88
VMP1-216ENST00000592790 G6PC3Q9BUM1 346 aa3.32□□□□□ -1.88
VMP1-216ENST00000592790 ARL6Q9H0F7 186 aa3.32□□□□□ -1.88
VMP1-216ENST00000592790 FXYD6Q9H0Q3 95 aa3.32□□□□□ -1.88
VMP1-216ENST00000592790 WDR26Q9H7D7 661 aa3.32□□□□□ -1.88
VMP1-216ENST00000592790 SPHK2Q9NRA0 654 aa3.32□□□□□ -1.88
VMP1-216ENST00000592790 SEMA4GQ9NTN9 838 aa3.32□□□□□ -1.88
VMP1-216ENST00000592790 TDP1Q9NUW8 608 aa3.32□□□□□ -1.88
VMP1-216ENST00000592790 MRPS18AQ9NVS2 196 aaKnown RBP3.32□□□□□ -1.88
VMP1-216ENST00000592790 TEX10Q9NXF1 929 aaPredicted RBP3.32□□□□□ -1.88
VMP1-216ENST00000592790 FBXL12Q9NXK8 326 aa3.32□□□□□ -1.88
VMP1-216ENST00000592790 IKZF2Q9UKS7 526 aa3.32□□□□□ -1.88
VMP1-216ENST00000592790 TMPRSS11EQ9UL52 423 aa3.32□□□□□ -1.88
VMP1-216ENST00000592790 CLEC4AQ9UMR7 237 aa3.32□□□□□ -1.88
VMP1-216ENST00000592790 GTF2A1LQ9UNN4 478 aa3.32□□□□□ -1.88
VMP1-216ENST00000592790 RASD1Q9Y272 281 aa3.32□□□□□ -1.88
VMP1-216ENST00000592790 SLC35A3Q9Y2D2 325 aa3.32□□□□□ -1.88
VMP1-216ENST00000592790 ANKRD36A6QL64 1941 aa3.32□□□□□ -1.88
VMP1-216ENST00000592790 A0A1W2PPL8 197 aa3.32□□□□□ -1.88
VMP1-216ENST00000592790 hCG_1807616A0A1W2PRN6 198 aa3.32□□□□□ -1.88
VMP1-216ENST00000592790 SLC5A10A0PJK1 596 aa3.32□□□□□ -1.88
VMP1-216ENST00000592790 LINC00862A6NCI5 91 aa3.32□□□□□ -1.88
VMP1-216ENST00000592790 AGAP14A8MT82 685 aa3.32□□□□□ -1.88
VMP1-216ENST00000592790 SNRPGP15A8MWD9 76 aa3.32□□□□□ -1.88
VMP1-216ENST00000592790 KDM4EB2RXH2 506 aaPredicted RBP3.32□□□□□ -1.88
VMP1-216ENST00000592790 F5H5P2 479 aa3.32□□□□□ -1.88
VMP1-216ENST00000592790 H3BQ06 376 aaPredicted RBP3.32□□□□□ -1.88
VMP1-216ENST00000592790 J3KTA2 159 aa3.32□□□□□ -1.88
VMP1-216ENST00000592790 K7ERQ8 282 aa3.32□□□□□ -1.88
VMP1-216ENST00000592790 SHOXO15266 292 aa3.32□□□□□ -1.88
VMP1-216ENST00000592790 GJB3O75712 270 aa3.32□□□□□ -1.88
VMP1-216ENST00000592790 RASGRP1O95267 797 aa3.32□□□□□ -1.88
VMP1-216ENST00000592790 CXCL14O95715 111 aa3.32□□□□□ -1.88
VMP1-216ENST00000592790 CH25HO95992 272 aa3.32□□□□□ -1.88
VMP1-216ENST00000592790 EGFP01133 1207 aa3.32□□□□□ -1.88
VMP1-216ENST00000592790 GBAP04062 536 aa3.32□□□□□ -1.88
VMP1-216ENST00000592790 OR2T7P0C7T2 308 aa3.32□□□□□ -1.88
VMP1-216ENST00000592790 UGT2B7P16662 529 aa3.32□□□□□ -1.88
VMP1-216ENST00000592790 FSHRP23945 695 aa3.32□□□□□ -1.88
VMP1-216ENST00000592790 ATP5A1P25705 553 aaKnown RBP3.32□□□□□ -1.88
VMP1-216ENST00000592790 PYCR1P32322 319 aa3.32□□□□□ -1.88
VMP1-216ENST00000592790 RAB28P51157 221 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms