RNA–Protein interactions for RNA: ENST00000586548.5

CIRBP-208, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-208ENST00000586548 DOK1Q99704 481 aa20.62■□□□□ 0.89
CIRBP-208ENST00000586548 ITPAQ9BY32 194 aa20.62■□□□□ 0.89
CIRBP-208ENST00000586548 MKKSQ9NPJ1 570 aaPredicted RBP20.62■□□□□ 0.89
CIRBP-208ENST00000586548 C14orf105Q9NVL8 296 aa20.62■□□□□ 0.89
CIRBP-208ENST00000586548 CBLCQ9ULV8 474 aa20.62■□□□□ 0.89
CIRBP-208ENST00000586548 CLCA1A8K7I4 914 aa20.61■□□□□ 0.89
CIRBP-208ENST00000586548 M0R129 80 aa20.61■□□□□ 0.89
CIRBP-208ENST00000586548 IGFBP1P08833 259 aaPredicted RBP20.61■□□□□ 0.89
CIRBP-208ENST00000586548 PRG2P13727 222 aa20.61■□□□□ 0.89
CIRBP-208ENST00000586548 HTR2AP28223 471 aa20.61■□□□□ 0.89
CIRBP-208ENST00000586548 SNRPGP62308 76 aaKnown RBP20.61■□□□□ 0.89
CIRBP-208ENST00000586548 ZNF141Q15928 474 aa20.61■□□□□ 0.89
CIRBP-208ENST00000586548 CASP12Q6UXS9 341 aa20.61■□□□□ 0.89
CIRBP-208ENST00000586548 MBOAT2Q6ZWT7 520 aa20.61■□□□□ 0.89
CIRBP-208ENST00000586548 TRUB1Q8WWH5 349 aaKnown RBP20.61■□□□□ 0.89
CIRBP-208ENST00000586548 TSLPQ969D9 159 aa20.61■□□□□ 0.89
CIRBP-208ENST00000586548 SENP5Q96HI0 755 aaPredicted RBP20.61■□□□□ 0.89
CIRBP-208ENST00000586548 COPS4Q9BT78 406 aa20.61■□□□□ 0.89
CIRBP-208ENST00000586548 ST6GALNAC1Q9NSC7 600 aaPredicted RBP20.61■□□□□ 0.89
CIRBP-208ENST00000586548 CLN6Q9NWW5 311 aa20.61■□□□□ 0.89
CIRBP-208ENST00000586548 SLC7A7Q9UM01 511 aa20.61■□□□□ 0.89
CIRBP-208ENST00000586548 SLC6A14Q9UN76 642 aa20.61■□□□□ 0.89
CIRBP-208ENST00000586548 TCRBV16S1A1N1A0A5B0 115 aa20.61■□□□□ 0.89
CIRBP-208ENST00000586548 ZNF99A8MXY4 864 aaPredicted RBP20.61■□□□□ 0.89
CIRBP-208ENST00000586548 PATE3B3GLJ2 98 aa20.61■□□□□ 0.89
CIRBP-208ENST00000586548 NPIPB9F8W1W9 429 aa20.61■□□□□ 0.89
CIRBP-208ENST00000586548 AHCYL1O43865 530 aa20.61■□□□□ 0.89
CIRBP-208ENST00000586548 GKN3PP0CG01 181 aa20.61■□□□□ 0.89
CIRBP-208ENST00000586548 OMPP47874 163 aa20.61■□□□□ 0.89
CIRBP-208ENST00000586548 ELAVL1Q15717 326 aaKnown RBP20.61■□□□□ 0.89
CIRBP-208ENST00000586548 CPEB4Q17RY0 729 aaKnown RBP eCLIP20.61■□□□□ 0.89
CIRBP-208ENST00000586548 C1orf189Q5VU69 101 aa20.61■□□□□ 0.89
CIRBP-208ENST00000586548 RHBDD2Q6NTF9 364 aa20.61■□□□□ 0.89
CIRBP-208ENST00000586548 SLC23A3Q6PIS1 610 aa20.61■□□□□ 0.89
CIRBP-208ENST00000586548 PRICKLE2Q7Z3G6 844 aa20.61■□□□□ 0.89
CIRBP-208ENST00000586548 MYDGFQ969H8 173 aa20.61■□□□□ 0.89
CIRBP-208ENST00000586548 ZNF559Q9BR84 538 aa20.61■□□□□ 0.89
CIRBP-208ENST00000586548 OR10H1Q9Y4A9 318 aa20.61■□□□□ 0.89
CIRBP-208ENST00000586548 VCANP13611 3396 aa20.6■□□□□ 0.89
CIRBP-208ENST00000586548 COL5A1P20908 1838 aaPredicted RBP20.6■□□□□ 0.89
CIRBP-208ENST00000586548 IGHV5-10-1A0A0J9YXX1 117 aa20.6■□□□□ 0.89
CIRBP-208ENST00000586548 MASP1P48740 699 aa20.6■□□□□ 0.89
CIRBP-208ENST00000586548 SLC37A1P57057 533 aa20.6■□□□□ 0.89
CIRBP-208ENST00000586548 PLAURQ03405 335 aa20.6■□□□□ 0.89
CIRBP-208ENST00000586548 OR1Q1Q15612 314 aa20.6■□□□□ 0.89
CIRBP-208ENST00000586548 TRIM61Q5EBN2 209 aa20.6■□□□□ 0.89
CIRBP-208ENST00000586548 RASSF6Q6ZTQ3 369 aa20.6■□□□□ 0.89
CIRBP-208ENST00000586548 BCORP1Q8N888 145 aa20.6■□□□□ 0.89
CIRBP-208ENST00000586548 RORBQ92753 470 aa20.6■□□□□ 0.89
CIRBP-208ENST00000586548 GGHQ92820 318 aa20.6■□□□□ 0.89
CIRBP-208ENST00000586548 SLC35B4Q969S0 331 aa20.6■□□□□ 0.89
CIRBP-208ENST00000586548 C12orf43Q96C57 262 aaKnown RBP20.6■□□□□ 0.89
CIRBP-208ENST00000586548 SLC46A1Q96NT5 459 aa20.6■□□□□ 0.89
CIRBP-208ENST00000586548 KRCC1Q9NPI7 259 aaPredicted RBP20.6■□□□□ 0.89
CIRBP-208ENST00000586548 CFL2Q9Y281 166 aa20.6■□□□□ 0.89
CIRBP-208ENST00000586548 CLCA3PQ9Y6N3 262 aa20.6■□□□□ 0.89
CIRBP-208ENST00000586548 SYNDIG1LA6NDD5 238 aa20.59■□□□□ 0.89
CIRBP-208ENST00000586548 ARHGAP33O14559 1287 aa20.59■□□□□ 0.89
CIRBP-208ENST00000586548 FPR3P25089 353 aa20.59■□□□□ 0.89
CIRBP-208ENST00000586548 PEX19P40855 299 aa20.59■□□□□ 0.89
CIRBP-208ENST00000586548 ATP12AP54707 1039 aa20.59■□□□□ 0.89
CIRBP-208ENST00000586548 TMBIM6P55061 237 aa20.59■□□□□ 0.89
CIRBP-208ENST00000586548 LSAMPQ13449 338 aa20.59■□□□□ 0.89
CIRBP-208ENST00000586548 FGFBP1Q14512 234 aa20.59■□□□□ 0.89
CIRBP-208ENST00000586548 VWA2Q5GFL6 755 aa20.59■□□□□ 0.89
CIRBP-208ENST00000586548 TMEM201Q5SNT2 666 aa20.59■□□□□ 0.89
CIRBP-208ENST00000586548 ERI1Q8IV48 349 aaKnown RBP20.59■□□□□ 0.89
CIRBP-208ENST00000586548 CMIPQ8IY22 773 aa20.59■□□□□ 0.89
CIRBP-208ENST00000586548 ZNF614Q8N883 585 aa20.59■□□□□ 0.89
CIRBP-208ENST00000586548 OR2I1PQ8NGU4 316 aa20.59■□□□□ 0.89
CIRBP-208ENST00000586548 TMEM255BQ8WV15 326 aa20.59■□□□□ 0.89
CIRBP-208ENST00000586548 CNOT9Q92600 299 aaKnown RBP20.59■□□□□ 0.89
CIRBP-208ENST00000586548 FAM46AQ96IP4 442 aaKnown RBP20.59■□□□□ 0.89
CIRBP-208ENST00000586548 PRSS27Q9BQR3 290 aa20.59■□□□□ 0.89
CIRBP-208ENST00000586548 SLC25A19Q9HC21 320 aa20.59■□□□□ 0.89
CIRBP-208ENST00000586548 FER1L5A0AVI2 2057 aa20.59■□□□□ 0.89
CIRBP-208ENST00000586548 NOL3O60936 208 aaKnown RBP20.58■□□□□ 0.89
CIRBP-208ENST00000586548 BCAS1O75363 584 aaPredicted RBP20.58■□□□□ 0.89
CIRBP-208ENST00000586548 TRMUO75648 421 aaKnown RBP20.58■□□□□ 0.89
CIRBP-208ENST00000586548 IGKV3-11P04433 115 aa20.58■□□□□ 0.89
CIRBP-208ENST00000586548 CDK1P06493 297 aa20.58■□□□□ 0.89
CIRBP-208ENST00000586548 CKMT1AP12532 417 aa20.58■□□□□ 0.89
CIRBP-208ENST00000586548 RORAP35398 523 aa20.58■□□□□ 0.89
CIRBP-208ENST00000586548 STAT5AP42229 794 aa20.58■□□□□ 0.89
CIRBP-208ENST00000586548 MAP2K4P45985 399 aa20.58■□□□□ 0.89
CIRBP-208ENST00000586548 RNF144AP50876 292 aaPredicted RBP20.58■□□□□ 0.89
CIRBP-208ENST00000586548 NUDT6P53370 316 aa20.58■□□□□ 0.89
CIRBP-208ENST00000586548 GP2P55259 537 aaKnown RBP20.58■□□□□ 0.89
CIRBP-208ENST00000586548 CDK5Q00535 292 aa20.58■□□□□ 0.89
CIRBP-208ENST00000586548 NNATQ16517 81 aa20.58■□□□□ 0.89
CIRBP-208ENST00000586548 CLPPQ16740 277 aaPredicted RBP20.58■□□□□ 0.89
CIRBP-208ENST00000586548 ZNF613Q6PF04 617 aa20.58■□□□□ 0.89
CIRBP-208ENST00000586548 KIF18BQ86Y91 864 aa20.58■□□□□ 0.89
CIRBP-208ENST00000586548 NRMQ8IXM6 262 aa20.58■□□□□ 0.89
CIRBP-208ENST00000586548 GALNT15Q8N3T1 639 aa20.58■□□□□ 0.89
CIRBP-208ENST00000586548 OR8J1Q8NGP2 316 aa20.58■□□□□ 0.89
CIRBP-208ENST00000586548 IFI44Q8TCB0 444 aa20.58■□□□□ 0.89
CIRBP-208ENST00000586548 SLC2A12Q8TD20 617 aa20.58■□□□□ 0.89
CIRBP-208ENST00000586548 MPP4Q96JB8 637 aa20.58■□□□□ 0.89
CIRBP-208ENST00000586548 ART5Q96L15 291 aa20.58■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms