RNA–Protein interactions for RNA: ENST00000585370.1

LIG3-203, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 235 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-203ENST00000585370 SENP5Q96HI0 755 aaPredicted RBP9.63□□□□□ -0.87
LIG3-203ENST00000585370 HRASLS5Q96KN8 279 aa9.63□□□□□ -0.87
LIG3-203ENST00000585370 CCDC74BQ96LY2 380 aa9.63□□□□□ -0.87
LIG3-203ENST00000585370 VSTM2LQ96N03 204 aa9.63□□□□□ -0.87
LIG3-203ENST00000585370 BARD1Q99728 777 aaKnown RBP9.63□□□□□ -0.87
LIG3-203ENST00000585370 DGCR6LQ9BY27 220 aa9.63□□□□□ -0.87
LIG3-203ENST00000585370 RIBC2Q9H4K1 309 aa9.63□□□□□ -0.87
LIG3-203ENST00000585370 CPNE5Q9HCH3 593 aa9.63□□□□□ -0.87
LIG3-203ENST00000585370 ST6GALNAC1Q9NSC7 600 aaPredicted RBP9.63□□□□□ -0.87
LIG3-203ENST00000585370 C14orf105Q9NVL8 296 aa9.63□□□□□ -0.87
LIG3-203ENST00000585370 DHCR7Q9UBM7 475 aaKnown RBP9.63□□□□□ -0.87
LIG3-203ENST00000585370 MKLN1Q9UL63 735 aa9.63□□□□□ -0.87
LIG3-203ENST00000585370 SSUH2Q9Y2M2 353 aa9.63□□□□□ -0.87
LIG3-203ENST00000585370 PCDHGA10Q9Y5H3 936 aa9.63□□□□□ -0.87
LIG3-203ENST00000585370 CLCA3PQ9Y6N3 262 aa9.63□□□□□ -0.87
LIG3-203ENST00000585370 SMIM31A0A1B0GVY4 71 aa9.62□□□□□ -0.87
LIG3-203ENST00000585370 TCRBV16S1A1N1A0A5B0 115 aa9.62□□□□□ -0.87
LIG3-203ENST00000585370 SH3PXD2BA1X283 911 aa9.62□□□□□ -0.87
LIG3-203ENST00000585370 OR6C76A6NM76 312 aa9.62□□□□□ -0.87
LIG3-203ENST00000585370 C17orf105B2RV13 164 aa9.62□□□□□ -0.87
LIG3-203ENST00000585370 TMX2-CTNND1H3BSU7 103 aa9.62□□□□□ -0.87
LIG3-203ENST00000585370 M0R3H8 397 aa9.62□□□□□ -0.87
LIG3-203ENST00000585370 POLR1CO15160 346 aaPredicted RBP9.62□□□□□ -0.87
LIG3-203ENST00000585370 KLK10O43240 276 aa9.62□□□□□ -0.87
LIG3-203ENST00000585370 MPZL2O60487 215 aa9.62□□□□□ -0.87
LIG3-203ENST00000585370 MITFO75030 526 aaPredicted RBP9.62□□□□□ -0.87
LIG3-203ENST00000585370 CDC123O75794 336 aaPredicted RBP9.62□□□□□ -0.87
LIG3-203ENST00000585370 CYP7B1O75881 506 aa9.62□□□□□ -0.87
LIG3-203ENST00000585370 SEC24DO94855 1032 aaPredicted RBP9.62□□□□□ -0.87
LIG3-203ENST00000585370 EPPINO95925 133 aa9.62□□□□□ -0.87
LIG3-203ENST00000585370 CCDC159P0C7I6 412 aa9.62□□□□□ -0.87
LIG3-203ENST00000585370 SMIM18P0DKX4 95 aa9.62□□□□□ -0.87
LIG3-203ENST00000585370 FGF5P12034 268 aa9.62□□□□□ -0.87
LIG3-203ENST00000585370 DRD5P21918 477 aa9.62□□□□□ -0.87
LIG3-203ENST00000585370 ELAVL4P26378 380 aaKnown RBP9.62□□□□□ -0.87
LIG3-203ENST00000585370 PPICP45877 212 aa9.62□□□□□ -0.87
LIG3-203ENST00000585370 HLCSP50747 726 aa9.62□□□□□ -0.87
LIG3-203ENST00000585370 RGS8P57771 180 aaPredicted RBP9.62□□□□□ -0.87
LIG3-203ENST00000585370 TAS2R41P59536 307 aa9.62□□□□□ -0.87
LIG3-203ENST00000585370 GABARAPL2P60520 117 aa9.62□□□□□ -0.87
LIG3-203ENST00000585370 EEF1A1P68104 462 aaKnown RBP9.62□□□□□ -0.87
LIG3-203ENST00000585370 RPP38P78345 283 aaKnown RBP9.62□□□□□ -0.87
LIG3-203ENST00000585370 DCDP81605 110 aaKnown RBP9.62□□□□□ -0.87
LIG3-203ENST00000585370 PSG6Q00889 435 aa9.62□□□□□ -0.87
LIG3-203ENST00000585370 RHAGQ02094 409 aa9.62□□□□□ -0.87
LIG3-203ENST00000585370 ALDH6A1Q02252 535 aaKnown RBP9.62□□□□□ -0.87
LIG3-203ENST00000585370 ZFP36L1Q07352 338 aaKnown RBP9.62□□□□□ -0.87
LIG3-203ENST00000585370 APOFQ13790 326 aa9.62□□□□□ -0.87
LIG3-203ENST00000585370 GANABQ14697 944 aaKnown RBP9.62□□□□□ -0.87
LIG3-203ENST00000585370 GPR68Q15743 365 aa9.62□□□□□ -0.87
LIG3-203ENST00000585370 CPEB4Q17RY0 729 aaKnown RBP eCLIP9.62□□□□□ -0.87
LIG3-203ENST00000585370 C3orf38Q5JPI3 329 aa9.62□□□□□ -0.87
LIG3-203ENST00000585370 FGD3Q5JSP0 725 aa9.62□□□□□ -0.87
LIG3-203ENST00000585370 ZNF770Q6IQ21 691 aaPredicted RBP9.62□□□□□ -0.87
LIG3-203ENST00000585370 IGF2-ASQ6U949 168 aa9.62□□□□□ -0.87
LIG3-203ENST00000585370 RBM44Q6ZP01 1051 aaKnown RBP9.62□□□□□ -0.87
LIG3-203ENST00000585370 RRM2BQ7LG56 351 aa9.62□□□□□ -0.87
LIG3-203ENST00000585370 GALNT5Q7Z7M9 940 aa9.62□□□□□ -0.87
LIG3-203ENST00000585370 PPP1R3BQ86XI6 285 aa9.62□□□□□ -0.87
LIG3-203ENST00000585370 SLITRK4Q8IW52 837 aa9.62□□□□□ -0.87
LIG3-203ENST00000585370 METTL27Q8N6F8 245 aaPredicted RBP9.62□□□□□ -0.87
LIG3-203ENST00000585370 ZNF615Q8N8J6 731 aa9.62□□□□□ -0.87
LIG3-203ENST00000585370 MORN4Q8NDC4 146 aa9.62□□□□□ -0.87
LIG3-203ENST00000585370 AGBL5Q8NDL9 886 aa9.62□□□□□ -0.87
LIG3-203ENST00000585370 OR4D11Q8NGI4 311 aa9.62□□□□□ -0.87
LIG3-203ENST00000585370 PTPMT1Q8WUK0 201 aaPredicted RBP9.62□□□□□ -0.87
LIG3-203ENST00000585370 PIK3R3Q92569 461 aa9.62□□□□□ -0.87
LIG3-203ENST00000585370 ZNF566Q969W8 418 aa9.62□□□□□ -0.87
LIG3-203ENST00000585370 ZG16BQ96DA0 208 aa9.62□□□□□ -0.87
LIG3-203ENST00000585370 OR6C1Q96RD1 312 aa9.62□□□□□ -0.87
LIG3-203ENST00000585370 FUZQ9BT04 418 aa9.62□□□□□ -0.87
LIG3-203ENST00000585370 CNPPD1Q9BV87 410 aa9.62□□□□□ -0.87
LIG3-203ENST00000585370 RSPO3Q9BXY4 272 aaPredicted RBP9.62□□□□□ -0.87
LIG3-203ENST00000585370 RBCK1Q9BYM8 510 aa9.62□□□□□ -0.87
LIG3-203ENST00000585370 UCK2Q9BZX2 261 aa9.62□□□□□ -0.87
LIG3-203ENST00000585370 KRCC1Q9NPI7 259 aaPredicted RBP9.62□□□□□ -0.87
LIG3-203ENST00000585370 PNO1Q9NRX1 252 aaKnown RBP9.62□□□□□ -0.87
LIG3-203ENST00000585370 SIDT1Q9NXL6 827 aaKnown RBP9.62□□□□□ -0.87
LIG3-203ENST00000585370 AKAP7Q9P0M2 348 aaPredicted RBP9.62□□□□□ -0.87
LIG3-203ENST00000585370 CBLCQ9ULV8 474 aa9.62□□□□□ -0.87
LIG3-203ENST00000585370 ERVK-19Q9WJR5 959 aa9.62□□□□□ -0.87
LIG3-203ENST00000585370 GPR55Q9Y2T6 319 aaPredicted RBP9.62□□□□□ -0.87
LIG3-203ENST00000585370 PCDHGB5Q9Y5G0 923 aa9.62□□□□□ -0.87
LIG3-203ENST00000585370 UNC13CQ8NB66 2214 aa9.62□□□□□ -0.87
LIG3-203ENST00000585370 GXYLT2A0PJZ3 443 aa9.61□□□□□ -0.87
LIG3-203ENST00000585370 D6RAR5 112 aa9.61□□□□□ -0.87
LIG3-203ENST00000585370 ERVH48-1M5A8F1 160 aa9.61□□□□□ -0.87
LIG3-203ENST00000585370 OR10H3O60404 316 aa9.61□□□□□ -0.87
LIG3-203ENST00000585370 SCRG1O75711 98 aa9.61□□□□□ -0.87
LIG3-203ENST00000585370 CLIC3O95833 236 aa9.61□□□□□ -0.87
LIG3-203ENST00000585370 GASTP01350 101 aa9.61□□□□□ -0.87
LIG3-203ENST00000585370 OSMP13725 252 aa9.61□□□□□ -0.87
LIG3-203ENST00000585370 PLA2G2AP14555 144 aa9.61□□□□□ -0.87
LIG3-203ENST00000585370 ENDOUP21128 410 aaKnown RBP9.61□□□□□ -0.87
LIG3-203ENST00000585370 AGXTP21549 392 aa9.61□□□□□ -0.87
LIG3-203ENST00000585370 RBMS1P29558 406 aaKnown RBP9.61□□□□□ -0.87
LIG3-203ENST00000585370 SSTR4P31391 388 aa9.61□□□□□ -0.87
LIG3-203ENST00000585370 TTKP33981 857 aa9.61□□□□□ -0.87
LIG3-203ENST00000585370 GGT2P36268 569 aa9.61□□□□□ -0.87
LIG3-203ENST00000585370 PIGAP37287 484 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms