RNA–Protein interactions for RNA: ENST00000574755.5

VPS33B-208, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 2,356 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-208ENST00000574755 DOC2BQ14184 412 aa13.03□□□□□ -0.32
VPS33B-208ENST00000574755 SPHARQ15513 63 aa13.03□□□□□ -0.32
VPS33B-208ENST00000574755 C11orf91Q3C1V1 193 aa13.03□□□□□ -0.32
VPS33B-208ENST00000574755 SPEM1Q8N4L4 309 aa13.03□□□□□ -0.32
VPS33B-208ENST00000574755 ADAMTS18Q8TE60 1221 aa13.03□□□□□ -0.32
VPS33B-208ENST00000574755 S100ZQ8WXG8 99 aa13.03□□□□□ -0.32
VPS33B-208ENST00000574755 PMM1Q92871 262 aa13.03□□□□□ -0.32
VPS33B-208ENST00000574755 FGF11Q92914 225 aa13.03□□□□□ -0.32
VPS33B-208ENST00000574755 CENPOQ9BU64 300 aa13.03□□□□□ -0.32
VPS33B-208ENST00000574755 TEX12Q9BXU0 123 aa13.03□□□□□ -0.32
VPS33B-208ENST00000574755 WDR12Q9GZL7 423 aaKnown RBP13.03□□□□□ -0.32
VPS33B-208ENST00000574755 POLR2J2Q9GZM3 115 aaKnown RBP13.03□□□□□ -0.32
VPS33B-208ENST00000574755 RNF167Q9H6Y7 350 aa13.03□□□□□ -0.32
VPS33B-208ENST00000574755 IL20RAQ9UHF4 553 aa13.03□□□□□ -0.32
VPS33B-208ENST00000574755 VCANP13611 3396 aa13.03□□□□□ -0.32
VPS33B-208ENST00000574755 BLACEA4D250 179 aa13.02□□□□□ -0.32
VPS33B-208ENST00000574755 ARHGAP33O14559 1287 aa13.02□□□□□ -0.32
VPS33B-208ENST00000574755 KLF4O43474 513 aa13.02□□□□□ -0.32
VPS33B-208ENST00000574755 SOX30O94993 753 aa13.02□□□□□ -0.32
VPS33B-208ENST00000574755 RAB36O95755 333 aa13.02□□□□□ -0.32
VPS33B-208ENST00000574755 MAOAP21397 527 aa13.02□□□□□ -0.32
VPS33B-208ENST00000574755 FNTBP49356 437 aa13.02□□□□□ -0.32
VPS33B-208ENST00000574755 ZNF267Q14586 743 aaPredicted RBP13.02□□□□□ -0.32
VPS33B-208ENST00000574755 TIMM50Q3ZCQ8 353 aa13.02□□□□□ -0.32
VPS33B-208ENST00000574755 TCTE1Q5JU00 501 aa13.02□□□□□ -0.32
VPS33B-208ENST00000574755 PDZK1Q5T2W1 519 aa13.02□□□□□ -0.32
VPS33B-208ENST00000574755 GARNL3Q5VVW2 1013 aa13.02□□□□□ -0.32
VPS33B-208ENST00000574755 ZNF620Q6ZNG0 422 aa13.02□□□□□ -0.32
VPS33B-208ENST00000574755 MRGPREQ86SM8 312 aa13.02□□□□□ -0.32
VPS33B-208ENST00000574755 LSRQ86X29 649 aaPredicted RBP13.02□□□□□ -0.32
VPS33B-208ENST00000574755 CYP4Z2PQ8N1L4 340 aa13.02□□□□□ -0.32
VPS33B-208ENST00000574755 POGLUT1Q8NBL1 392 aa13.02□□□□□ -0.32
VPS33B-208ENST00000574755 KBTBD8Q8NFY9 601 aa13.02□□□□□ -0.32
VPS33B-208ENST00000574755 OR4N2Q8NGD1 307 aa13.02□□□□□ -0.32
VPS33B-208ENST00000574755 OR52I1Q8NGK6 324 aa13.02□□□□□ -0.32
VPS33B-208ENST00000574755 MCFD2Q8NI22 146 aa13.02□□□□□ -0.32
VPS33B-208ENST00000574755 HOXB13Q92826 284 aaPredicted RBP13.02□□□□□ -0.32
VPS33B-208ENST00000574755 ZDHHC12Q96GR4 267 aa13.02□□□□□ -0.32
VPS33B-208ENST00000574755 ZNF285Q96NJ3 590 aa13.02□□□□□ -0.32
VPS33B-208ENST00000574755 OPALINQ96PE5 141 aa13.02□□□□□ -0.32
VPS33B-208ENST00000574755 PRSS27Q9BQR3 290 aa13.02□□□□□ -0.32
VPS33B-208ENST00000574755 LMF2Q9BU23 707 aaKnown RBP13.02□□□□□ -0.32
VPS33B-208ENST00000574755 CNPPD1Q9BV87 410 aa13.02□□□□□ -0.32
VPS33B-208ENST00000574755 AKIP1Q9NQ31 210 aa13.02□□□□□ -0.32
VPS33B-208ENST00000574755 TESQ9UGI8 421 aaKnown RBP13.02□□□□□ -0.32
VPS33B-208ENST00000574755 LSM2Q9Y333 95 aaKnown RBP13.02□□□□□ -0.32
VPS33B-208ENST00000574755 PCDHGA3Q9Y5H0 932 aa13.02□□□□□ -0.32
VPS33B-208ENST00000574755 CDC42EP2O14613 210 aa13.02□□□□□ -0.33
VPS33B-208ENST00000574755 PRODHO43272 600 aa13.02□□□□□ -0.33
VPS33B-208ENST00000574755 SCG5P05408 212 aa13.02□□□□□ -0.33
VPS33B-208ENST00000574755 BCKDHBP21953 392 aa13.02□□□□□ -0.33
VPS33B-208ENST00000574755 SOX3P41225 446 aa13.02□□□□□ -0.33
VPS33B-208ENST00000574755 PGDP52209 483 aa13.02□□□□□ -0.33
VPS33B-208ENST00000574755 C1DQ13901 141 aaKnown RBP13.02□□□□□ -0.33
VPS33B-208ENST00000574755 OGFOD3Q6PK18 319 aa13.02□□□□□ -0.33
VPS33B-208ENST00000574755 WDR88Q6ZMY6 472 aa13.02□□□□□ -0.33
VPS33B-208ENST00000574755 IGFN1Q86VF2 1251 aa13.02□□□□□ -0.33
VPS33B-208ENST00000574755 SDR16C5Q8N3Y7 309 aa13.02□□□□□ -0.33
VPS33B-208ENST00000574755 CAMKK1Q8N5S9 505 aa13.02□□□□□ -0.33
VPS33B-208ENST00000574755 NANOGP1Q8N7R0 232 aa13.02□□□□□ -0.33
VPS33B-208ENST00000574755 ANKK1Q8NFD2 765 aa13.02□□□□□ -0.33
VPS33B-208ENST00000574755 OR6Q1Q8NGQ2 317 aa13.02□□□□□ -0.33
VPS33B-208ENST00000574755 C1orf216Q8TAB5 229 aa13.02□□□□□ -0.33
VPS33B-208ENST00000574755 ARSGQ96EG1 525 aa13.02□□□□□ -0.33
VPS33B-208ENST00000574755 AHCYL2Q96HN2 611 aaKnown RBP13.02□□□□□ -0.33
VPS33B-208ENST00000574755 FBXO8Q9NRD0 319 aa13.02□□□□□ -0.33
VPS33B-208ENST00000574755 LRIT1Q9P2V4 623 aa13.02□□□□□ -0.33
VPS33B-208ENST00000574755 DIMT1Q9UNQ2 313 aaKnown RBP13.02□□□□□ -0.33
VPS33B-208ENST00000574755 DTX4Q9Y2E6 619 aa13.02□□□□□ -0.33
VPS33B-208ENST00000574755 PIAS2O75928 621 aa13.01□□□□□ -0.33
VPS33B-208ENST00000574755 RPS3AP61247 264 aaKnown RBP13.01□□□□□ -0.33
VPS33B-208ENST00000574755 IGLV3-21P80748 117 aaPredicted RBP13.01□□□□□ -0.33
VPS33B-208ENST00000574755 SSX1Q16384 188 aa13.01□□□□□ -0.33
VPS33B-208ENST00000574755 KLHL22Q53GT1 634 aa13.01□□□□□ -0.33
VPS33B-208ENST00000574755 PAQR6Q6TCH4 344 aa13.01□□□□□ -0.33
VPS33B-208ENST00000574755 BTLAQ7Z6A9 289 aa13.01□□□□□ -0.33
VPS33B-208ENST00000574755 ATCAYQ86WG3 371 aa13.01□□□□□ -0.33
VPS33B-208ENST00000574755 AMER2Q8N7J2 671 aa13.01□□□□□ -0.33
VPS33B-208ENST00000574755 PROKR2Q8NFJ6 384 aa13.01□□□□□ -0.33
VPS33B-208ENST00000574755 OR4Q3Q8NH05 313 aa13.01□□□□□ -0.33
VPS33B-208ENST00000574755 OR51Q1Q8NH59 317 aa13.01□□□□□ -0.33
VPS33B-208ENST00000574755 TMEM239Q8WW34 195 aa13.01□□□□□ -0.33
VPS33B-208ENST00000574755 VSTM2LQ96N03 204 aa13.01□□□□□ -0.33
VPS33B-208ENST00000574755 TAPBPLQ9BX59 468 aa13.01□□□□□ -0.33
VPS33B-208ENST00000574755 DPH1Q9BZG8 443 aa13.01□□□□□ -0.33
VPS33B-208ENST00000574755 SPRTNQ9H040 489 aaPredicted RBP13.01□□□□□ -0.33
VPS33B-208ENST00000574755 EPHA6Q9UF33 1036 aa13.01□□□□□ -0.33
VPS33B-208ENST00000574755 TMEM184BQ9Y519 407 aaPredicted RBP13.01□□□□□ -0.33
VPS33B-208ENST00000574755 CDH10Q9Y6N8 788 aa13.01□□□□□ -0.33
VPS33B-208ENST00000574755 RNF215Q9Y6U7 377 aa13.01□□□□□ -0.33
VPS33B-208ENST00000574755 SPEGQ15772 3267 aa13.01□□□□□ -0.33
VPS33B-208ENST00000574755 KPNA4O00629 521 aaPredicted RBP13.01□□□□□ -0.33
VPS33B-208ENST00000574755 SURF4O15260 269 aa13.01□□□□□ -0.33
VPS33B-208ENST00000574755 FMO6PO60774 539 aa13.01□□□□□ -0.33
VPS33B-208ENST00000574755 PRAMEF2O60811 474 aa13.01□□□□□ -0.33
VPS33B-208ENST00000574755 APOL3O95236 402 aa13.01□□□□□ -0.33
VPS33B-208ENST00000574755 IFNA16P05015 189 aa13.01□□□□□ -0.33
VPS33B-208ENST00000574755 MYL12AP19105 171 aa13.01□□□□□ -0.33
VPS33B-208ENST00000574755 MTNR1AP48039 350 aa13.01□□□□□ -0.33
VPS33B-208ENST00000574755 PLAURQ03405 335 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms