RNA–Protein interactions for RNA: ENST00000573577.5

RPAIN-213, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,282 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-213ENST00000573577 AURKBQ96GD4 344 aaPredicted RBP12.35□□□□□ -0.43
RPAIN-213ENST00000573577 TRNT1Q96Q11 434 aaKnown RBP12.35□□□□□ -0.43
RPAIN-213ENST00000573577 ZNF350Q9GZX5 532 aa12.35□□□□□ -0.43
RPAIN-213ENST00000573577 ZNF703Q9H7S9 590 aaPredicted RBP12.35□□□□□ -0.43
RPAIN-213ENST00000573577 CALML5Q9NZT1 146 aa12.35□□□□□ -0.43
RPAIN-213ENST00000573577 ARMCX1Q9P291 453 aa12.35□□□□□ -0.43
RPAIN-213ENST00000573577 P2RX2Q9UBL9 471 aa12.35□□□□□ -0.43
RPAIN-213ENST00000573577 SUCOQ9UBS9 1254 aaKnown RBP12.35□□□□□ -0.43
RPAIN-213ENST00000573577 PLEKHB1Q9UF11 243 aaPredicted RBP12.35□□□□□ -0.43
RPAIN-213ENST00000573577 ARL2BPQ9Y2Y0 163 aa12.35□□□□□ -0.43
RPAIN-213ENST00000573577 GMEB1Q9Y692 573 aa12.35□□□□□ -0.43
RPAIN-213ENST00000573577 EXPH5Q8NEV8 1989 aa12.35□□□□□ -0.43
RPAIN-213ENST00000573577 A0A1W2PQD3 144 aa12.34□□□□□ -0.43
RPAIN-213ENST00000573577 A1L4Q6 167 aa12.34□□□□□ -0.43
RPAIN-213ENST00000573577 H3BNH8 94 aa12.34□□□□□ -0.43
RPAIN-213ENST00000573577 PRRG2O14669 202 aa12.34□□□□□ -0.43
RPAIN-213ENST00000573577 GNB5O14775 395 aa12.34□□□□□ -0.43
RPAIN-213ENST00000573577 NDUFB5O43674 189 aa12.34□□□□□ -0.43
RPAIN-213ENST00000573577 SHOX2O60902 331 aaPredicted RBP12.34□□□□□ -0.43
RPAIN-213ENST00000573577 CBR3O75828 277 aa12.34□□□□□ -0.43
RPAIN-213ENST00000573577 OXSR1O95747 527 aaPredicted RBP12.34□□□□□ -0.43
RPAIN-213ENST00000573577 FAM107AO95990 144 aa12.34□□□□□ -0.43
RPAIN-213ENST00000573577 NPPAP01160 153 aa12.34□□□□□ -0.43
RPAIN-213ENST00000573577 IGHG3P01860 377 aa12.34□□□□□ -0.43
RPAIN-213ENST00000573577 CELA3AP09093 270 aa12.34□□□□□ -0.43
RPAIN-213ENST00000573577 RFPL3SP0C7P2 107 aa12.34□□□□□ -0.43
RPAIN-213ENST00000573577 NR2F1P10589 423 aa12.34□□□□□ -0.43
RPAIN-213ENST00000573577 GP1BBP13224 206 aa12.34□□□□□ -0.43
RPAIN-213ENST00000573577 HOXB9P17482 250 aaPredicted RBP12.34□□□□□ -0.43
RPAIN-213ENST00000573577 DCTP40126 519 aa12.34□□□□□ -0.43
RPAIN-213ENST00000573577 ATP12AP54707 1039 aa12.34□□□□□ -0.43
RPAIN-213ENST00000573577 DSTNP60981 165 aa12.34□□□□□ -0.43
RPAIN-213ENST00000573577 C17orf67Q0P5P2 114 aa12.34□□□□□ -0.43
RPAIN-213ENST00000573577 RGNQ15493 299 aa12.34□□□□□ -0.43
RPAIN-213ENST00000573577 GPAT3Q53EU6 434 aa12.34□□□□□ -0.43
RPAIN-213ENST00000573577 COX20Q5RI15 118 aa12.34□□□□□ -0.43
RPAIN-213ENST00000573577 GKAP1Q5VSY0 366 aaPredicted RBP12.34□□□□□ -0.43
RPAIN-213ENST00000573577 DLEU7Q6UYE1 221 aa12.34□□□□□ -0.43
RPAIN-213ENST00000573577 SNX32Q86XE0 403 aa12.34□□□□□ -0.43
RPAIN-213ENST00000573577 PLCZ1Q86YW0 608 aa12.34□□□□□ -0.43
RPAIN-213ENST00000573577 OR4C3Q8NH37 302 aa12.34□□□□□ -0.43
RPAIN-213ENST00000573577 FAM57AQ8TBR7 257 aa12.34□□□□□ -0.43
RPAIN-213ENST00000573577 ROPN1LQ96C74 230 aa12.34□□□□□ -0.43
RPAIN-213ENST00000573577 CCDC120Q96HB5 630 aa12.34□□□□□ -0.43
RPAIN-213ENST00000573577 CCT8L2Q96SF2 557 aa12.34□□□□□ -0.43
RPAIN-213ENST00000573577 CGREF1Q99674 301 aa12.34□□□□□ -0.43
RPAIN-213ENST00000573577 LDAHQ9H6V9 325 aa12.34□□□□□ -0.43
RPAIN-213ENST00000573577 FBXO34Q9NWN3 711 aa12.34□□□□□ -0.43
RPAIN-213ENST00000573577 SLC25A37Q9NYZ2 338 aa12.34□□□□□ -0.43
RPAIN-213ENST00000573577 FLRT3Q9NZU0 649 aa12.34□□□□□ -0.43
RPAIN-213ENST00000573577 VAPAQ9P0L0 249 aa12.34□□□□□ -0.43
RPAIN-213ENST00000573577 SLAMF8Q9P0V8 285 aa12.34□□□□□ -0.43
RPAIN-213ENST00000573577 C15orf41Q9Y2V0 281 aa12.34□□□□□ -0.43
RPAIN-213ENST00000573577 WDR45Q9Y484 360 aa12.34□□□□□ -0.43
RPAIN-213ENST00000573577 LIPGQ9Y5X9 500 aa12.34□□□□□ -0.43
RPAIN-213ENST00000573577 TRBV5-3A0A0A0MS03 114 aa12.33□□□□□ -0.44
RPAIN-213ENST00000573577 LOC100653049A0A140TA62 436 aa12.33□□□□□ -0.44
RPAIN-213ENST00000573577 MRASO14807 208 aa12.33□□□□□ -0.44
RPAIN-213ENST00000573577 TRAPPC6AO75865 159 aa12.33□□□□□ -0.44
RPAIN-213ENST00000573577 DCTN3O75935 186 aa12.33□□□□□ -0.44
RPAIN-213ENST00000573577 KRT34O76011 436 aa12.33□□□□□ -0.44
RPAIN-213ENST00000573577 ANGPTL1O95841 491 aa12.33□□□□□ -0.44
RPAIN-213ENST00000573577 CD1EP15812 388 aa12.33□□□□□ -0.44
RPAIN-213ENST00000573577 GCKP35557 465 aa12.33□□□□□ -0.44
RPAIN-213ENST00000573577 MVDP53602 400 aa12.33□□□□□ -0.44
RPAIN-213ENST00000573577 CRISP3P54108 245 aa12.33□□□□□ -0.44
RPAIN-213ENST00000573577 GAS1P54826 345 aa12.33□□□□□ -0.44
RPAIN-213ENST00000573577 TOMM20Q15388 145 aa12.33□□□□□ -0.44
RPAIN-213ENST00000573577 GPR68Q15743 365 aa12.33□□□□□ -0.44
RPAIN-213ENST00000573577 TRMT5Q32P41 509 aaKnown RBP12.33□□□□□ -0.44
RPAIN-213ENST00000573577 FNDC7Q5VTL7 733 aa12.33□□□□□ -0.44
RPAIN-213ENST00000573577 REP15Q6BDI9 236 aa12.33□□□□□ -0.44
RPAIN-213ENST00000573577 LRRC74BQ6ZQY2 392 aa12.33□□□□□ -0.44
RPAIN-213ENST00000573577 MAMDC2Q7Z304 686 aaPredicted RBP12.33□□□□□ -0.44
RPAIN-213ENST00000573577 MTERF4Q7Z6M4 381 aaKnown RBP12.33□□□□□ -0.44
RPAIN-213ENST00000573577 ZAR1Q86SH2 424 aa12.33□□□□□ -0.44
RPAIN-213ENST00000573577 MARCH3Q86UD3 253 aa12.33□□□□□ -0.44
RPAIN-213ENST00000573577 CD163Q86VB7 1156 aa12.33□□□□□ -0.44
RPAIN-213ENST00000573577 RETREG3Q86VR2 466 aa12.33□□□□□ -0.44
RPAIN-213ENST00000573577 DOLPP1Q86YN1 238 aa12.33□□□□□ -0.44
RPAIN-213ENST00000573577 MSRB3Q8IXL7 192 aa12.33□□□□□ -0.44
RPAIN-213ENST00000573577 ZNF619Q8N2I2 560 aa12.33□□□□□ -0.44
RPAIN-213ENST00000573577 OR4K17Q8NGC6 315 aa12.33□□□□□ -0.44
RPAIN-213ENST00000573577 PMM1Q92871 262 aa12.33□□□□□ -0.44
RPAIN-213ENST00000573577 CMTM5Q96DZ9 223 aa12.33□□□□□ -0.44
RPAIN-213ENST00000573577 GNRHR2Q96P88 292 aa12.33□□□□□ -0.44
RPAIN-213ENST00000573577 SH3GL1Q99961 368 aa12.33□□□□□ -0.44
RPAIN-213ENST00000573577 CCDC106Q9BWC9 280 aa12.33□□□□□ -0.44
RPAIN-213ENST00000573577 PTGES2Q9H7Z7 377 aa12.33□□□□□ -0.44
RPAIN-213ENST00000573577 ACKR4Q9NPB9 350 aa12.33□□□□□ -0.44
RPAIN-213ENST00000573577 GID8Q9NWU2 228 aa12.33□□□□□ -0.44
RPAIN-213ENST00000573577 MEMO1Q9Y316 297 aa12.33□□□□□ -0.44
RPAIN-213ENST00000573577 UTP20O75691 2785 aaKnown RBP12.33□□□□□ -0.44
RPAIN-213ENST00000573577 NINQ8N4C6 2090 aa12.33□□□□□ -0.44
RPAIN-213ENST00000573577 SPTBN1Q01082 2364 aaKnown RBP12.32□□□□□ -0.44
RPAIN-213ENST00000573577 A0A1B0GVC2 190 aa12.32□□□□□ -0.44
RPAIN-213ENST00000573577 OR14I1A6ND48 311 aa12.32□□□□□ -0.44
RPAIN-213ENST00000573577 FBP2O00757 339 aa12.32□□□□□ -0.44
RPAIN-213ENST00000573577 KIAA0513O60268 411 aa12.32□□□□□ -0.44
RPAIN-213ENST00000573577 SUSD5O60279 629 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms